RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 INSIG2Q9Y5U4 225 aa8.31□□□□□ -1.08
CHRNA1-202ENST00000348749 MUC6Q6W4X9 2439 aa8.31□□□□□ -1.08
CHRNA1-202ENST00000348749 C19orf67A6NJJ6 358 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 UPK2O00526 184 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 RAB9AP51151 201 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 Q5PR19 223 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 PDPNQ86YL7 162 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 DAZAP1Q96EP5 407 aaKnown RBP8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 VGLL1Q99990 258 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 KBTBD11-OT1A0A1B0GTJ5 212 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 OVOL3O00110 214 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 ZNF207O43670 478 aaKnown RBP8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 CSN3P07498 182 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 CKS1BP61024 79 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 MLANAQ16655 118 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 C3orf36Q3SXR2 165 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 CCDC144NLQ6NUI1 221 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 PATE2Q6UY27 113 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 STXBP6Q8NFX7 210 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 OR5AN1Q8NGI8 311 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 BLNKQ8WV28 456 aa8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 SPANXB1Q9NS25 103 aaPredicted RBP8.3□□□□□ -1.08
CHRNA1-202ENST00000348749 A0A096LNJ9 63 aa8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 F8W1H4 67 aa8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 TM4SF5O14894 197 aa8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 LHBP01229 141 aa8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 SAA2P0DJI9 122 aaPredicted RBP8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 CT45A6P0DMU7 189 aa8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 CT45A5P0DMU8 189 aa8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 CT45A10P0DMU9 189 aa8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 CT45A7P0DMV0 189 aa8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 KIR2DL2P43627 348 aaPredicted RBP8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 HOXA4Q00056 320 aaPredicted RBP8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 C17orf58Q2M2W7 97 aa8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 CT45A1Q5HYN5 189 aa8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 C1orf210Q8IVY1 113 aa8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 CT45A3Q8NHU0 189 aa8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 PIFOQ8TCI5 191 aa8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 HIGD1BQ9P298 99 aa8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 CACNA1GO43497 2377 aa8.29□□□□□ -1.08
CHRNA1-202ENST00000348749 A0A1B0GW15 77 aa8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 PGPA6NDG6 321 aa8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 IGHV3-13P01766 116 aa8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 FCGR2BP31994 310 aaPredicted RBP8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 GATA4P43694 442 aa8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 PSMG4Q5JS54 123 aa8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 DHRS13Q6UX07 377 aa8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 SLC25A48Q6ZT89 311 aaKnown RBP8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 PRSS3P2Q8NHM4 247 aa8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 ZNF48Q96MX3 618 aaPredicted RBP8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 DKK4Q9UBT3 224 aa8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 TIMM8BQ9Y5J9 83 aaPredicted RBP8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 MED13Q9UHV7 2174 aa8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 IGHV1-18A0A0C4DH31 117 aa8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 A0A1W2PNU3 283 aaPredicted RBP8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 TCRBV4S1A1TA0A5B7 111 aa8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 RIGQ13278 110 aa8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 ZNF788Q6ZQV5 615 aa8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 PHLDA1Q8WV24 401 aaPredicted RBP8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 TMEM190Q8WZ59 177 aa8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 MRAP2Q96G30 205 aa8.28□□□□□ -1.08
CHRNA1-202ENST00000348749 DSCAML1Q8TD84 2053 aa8.27□□□□□ -1.08
CHRNA1-202ENST00000348749 A0A1B0GUT8 65 aa8.27□□□□□ -1.09
CHRNA1-202ENST00000348749 KLK10O43240 276 aa8.27□□□□□ -1.09
CHRNA1-202ENST00000348749 MTURNQ8N3F0 131 aa8.27□□□□□ -1.09
CHRNA1-202ENST00000348749 THAP8Q8NA92 274 aa8.27□□□□□ -1.09
CHRNA1-202ENST00000348749 TMEM116Q8NCL8 245 aa8.27□□□□□ -1.09
CHRNA1-202ENST00000348749 OR8A1Q8NGG7 326 aa8.27□□□□□ -1.09
CHRNA1-202ENST00000348749 OSR1Q8TAX0 266 aaPredicted RBP8.27□□□□□ -1.09
CHRNA1-202ENST00000348749 FAM186AA6NE01 2351 aa8.27□□□□□ -1.09
CHRNA1-202ENST00000348749 TANC2Q9HCD6 1990 aa8.27□□□□□ -1.09
CHRNA1-202ENST00000348749 TCRAP04437 139 aa8.26□□□□□ -1.09
CHRNA1-202ENST00000348749 COL8A1P27658 744 aa8.26□□□□□ -1.09
CHRNA1-202ENST00000348749 SSBP2P81877 361 aaPredicted RBP8.26□□□□□ -1.09
CHRNA1-202ENST00000348749 CNEP1R1Q8N9A8 125 aa8.26□□□□□ -1.09
CHRNA1-202ENST00000348749 SGK494Q96LW2 274 aa8.26□□□□□ -1.09
CHRNA1-202ENST00000348749 AHCTF1Q8WYP5 2266 aa8.26□□□□□ -1.09
CHRNA1-202ENST00000348749 IGKV1D-37A0A075B6S9 117 aa8.26□□□□□ -1.09
CHRNA1-202ENST00000348749 TRAV26-1A0A087WT03 109 aa8.26□□□□□ -1.09
CHRNA1-202ENST00000348749 TRBV6-1A0A0K0K1D8 114 aa8.26□□□□□ -1.09
CHRNA1-202ENST00000348749 CRYBA4P53673 196 aa8.26□□□□□ -1.09
CHRNA1-202ENST00000348749 CACNG7P62955 275 aa8.26□□□□□ -1.09
CHRNA1-202ENST00000348749 LINC00305Q7Z4B0 112 aa8.26□□□□□ -1.09
CHRNA1-202ENST00000348749 Q86TA4 180 aa8.26□□□□□ -1.09
CHRNA1-202ENST00000348749 PCP2Q8IVA1 136 aa8.26□□□□□ -1.09
CHRNA1-202ENST00000348749 ZNF71Q9NQZ8 489 aaPredicted RBP8.26□□□□□ -1.09
CHRNA1-202ENST00000348749 A0A1W2PRD5 423 aa8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 A0A1W2PRF3 423 aa8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 A0A1W2PRM7 423 aa8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 E9PLD3 99 aa8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 GLRXP35754 106 aa8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 FXYD2P54710 66 aa8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 ERHP84090 104 aaKnown RBP8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 ZNRF1Q8ND25 227 aa8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 ZNF414Q96IQ9 312 aa8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 SPAG8Q99932 426 aaPredicted RBP8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 NDUFA4L2Q9NRX3 87 aa8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 RPUSD1Q9UJJ7 312 aaKnown RBP8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 FZR1Q9UM11 496 aa8.25□□□□□ -1.09
CHRNA1-202ENST00000348749 PROCRQ9UNN8 238 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms