RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 GGNQ86UU5 652 aa14.34□□□□□ -0.11
SPAST-202ENST00000345662 LYPD6BQ8NI32 183 aa14.34□□□□□ -0.11
SPAST-202ENST00000345662 LIME1Q9H400 295 aa14.34□□□□□ -0.11
SPAST-202ENST00000345662 TRAV8-1A0A0A6YYK1 113 aa14.34□□□□□ -0.11
SPAST-202ENST00000345662 SSBP2P81877 361 aaPredicted RBP14.34□□□□□ -0.11
SPAST-202ENST00000345662 LY6EQ16553 131 aa14.34□□□□□ -0.11
SPAST-202ENST00000345662 SCRT1Q9BWW7 348 aa14.34□□□□□ -0.11
SPAST-202ENST00000345662 GFRA4Q9GZZ7 299 aa14.34□□□□□ -0.11
SPAST-202ENST00000345662 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.34□□□□□ -0.11
SPAST-202ENST00000345662 TOMM40O96008 361 aa14.34□□□□□ -0.11
SPAST-202ENST00000345662 TMEM155Q4W5P6 130 aa14.34□□□□□ -0.11
SPAST-202ENST00000345662 SBF1O95248 1867 aa14.34□□□□□ -0.11
SPAST-202ENST00000345662 C9orf118A6NHY6 69 aa14.33□□□□□ -0.11
SPAST-202ENST00000345662 TMPRSS3P57727 454 aa14.33□□□□□ -0.11
SPAST-202ENST00000345662 FDCSPQ8NFU4 85 aa14.33□□□□□ -0.11
SPAST-202ENST00000345662 PGPEP1Q9NXJ5 209 aa14.33□□□□□ -0.11
SPAST-202ENST00000345662 CASP8AP2Q9UKL3 1982 aa14.33□□□□□ -0.11
SPAST-202ENST00000345662 SRSF6Q13247 344 aaKnown RBP14.33□□□□□ -0.12
SPAST-202ENST00000345662 ZNF329Q86UD4 541 aa14.33□□□□□ -0.12
SPAST-202ENST00000345662 LSM4Q9Y4Z0 139 aaKnown RBP14.33□□□□□ -0.12
SPAST-202ENST00000345662 TMEM238C9JI98 176 aa14.33□□□□□ -0.12
SPAST-202ENST00000345662 C20orf204Q6ZNR8 217 aa14.33□□□□□ -0.12
SPAST-202ENST00000345662 ARTNQ5T4W7 220 aa14.33□□□□□ -0.12
SPAST-202ENST00000345662 IGLL1P15814 213 aa14.32□□□□□ -0.12
SPAST-202ENST00000345662 PLAURQ03405 335 aa14.32□□□□□ -0.12
SPAST-202ENST00000345662 STPG4Q8N801 248 aa14.32□□□□□ -0.12
SPAST-202ENST00000345662 K7EP13 123 aa14.32□□□□□ -0.12
SPAST-202ENST00000345662 C9orf106Q8NAJ2 232 aa14.32□□□□□ -0.12
SPAST-202ENST00000345662 IGKV2-40A0A087WW87 121 aaPredicted RBP14.32□□□□□ -0.12
SPAST-202ENST00000345662 IGKV2D-40P01614 121 aaPredicted RBP14.32□□□□□ -0.12
SPAST-202ENST00000345662 TMEM249Q2WGJ8 235 aa14.32□□□□□ -0.12
SPAST-202ENST00000345662 CLEC2AQ6UVW9 174 aa14.32□□□□□ -0.12
SPAST-202ENST00000345662 LINC00479Q96M42 142 aa14.32□□□□□ -0.12
SPAST-202ENST00000345662 PTPRDP23468 1912 aa14.32□□□□□ -0.12
SPAST-202ENST00000345662 DOCK11Q5JSL3 2073 aa14.32□□□□□ -0.12
SPAST-202ENST00000345662 FOXL2NBQ6ZUU3 175 aa14.32□□□□□ -0.12
SPAST-202ENST00000345662 IGKV1-6A0A0C4DH72 117 aa14.31□□□□□ -0.12
SPAST-202ENST00000345662 RBMY1BA6NDE4 496 aaKnown RBP14.31□□□□□ -0.12
SPAST-202ENST00000345662 RBMY1EA6NEQ0 496 aaKnown RBP14.31□□□□□ -0.12
SPAST-202ENST00000345662 M0R2P5 195 aa14.31□□□□□ -0.12
SPAST-202ENST00000345662 RBMY1DP0C7P1 496 aaKnown RBP14.31□□□□□ -0.12
SPAST-202ENST00000345662 RBMY1A1P0DJD3 496 aaKnown RBP14.31□□□□□ -0.12
SPAST-202ENST00000345662 RBMY1CP0DJD4 496 aa14.31□□□□□ -0.12
SPAST-202ENST00000345662 IGHV2-26A0A0B4J1V2 119 aa14.31□□□□□ -0.12
SPAST-202ENST00000345662 CD7P09564 240 aa14.31□□□□□ -0.12
SPAST-202ENST00000345662 IL15RAQ13261 267 aa14.31□□□□□ -0.12
SPAST-202ENST00000345662 TMEM167AQ8TBQ9 72 aa14.31□□□□□ -0.12
SPAST-202ENST00000345662 TMEM158Q8WZ71 300 aa14.31□□□□□ -0.12
SPAST-202ENST00000345662 CYYR1Q96J86 154 aa14.31□□□□□ -0.12
SPAST-202ENST00000345662 SLC25A15Q9Y619 301 aa14.31□□□□□ -0.12
SPAST-202ENST00000345662 RHOGP84095 191 aa14.3□□□□□ -0.12
SPAST-202ENST00000345662 E9PLN8 166 aa14.3□□□□□ -0.12
SPAST-202ENST00000345662 PRB4P10163 310 aaPredicted RBP14.3□□□□□ -0.12
SPAST-202ENST00000345662 BSPH1Q075Z2 132 aa14.3□□□□□ -0.12
SPAST-202ENST00000345662 SH2D1AO60880 128 aa14.3□□□□□ -0.12
SPAST-202ENST00000345662 AMN1Q8IY45 258 aa14.3□□□□□ -0.12
SPAST-202ENST00000345662 TOMM7Q9P0U1 55 aa14.3□□□□□ -0.12
SPAST-202ENST00000345662 PINLYPA6NC86 204 aa14.29□□□□□ -0.12
SPAST-202ENST00000345662 MYOD1P15172 320 aa14.29□□□□□ -0.12
SPAST-202ENST00000345662 LINC00205P59089 165 aa14.29□□□□□ -0.12
SPAST-202ENST00000345662 CD177Q8N6Q3 437 aa14.29□□□□□ -0.12
SPAST-202ENST00000345662 V9GYV3 84 aa14.29□□□□□ -0.12
SPAST-202ENST00000345662 TNFRSF14Q92956 283 aa14.29□□□□□ -0.12
SPAST-202ENST00000345662 TSSC4Q9Y5U2 329 aaPredicted RBP14.29□□□□□ -0.12
SPAST-202ENST00000345662 IGHV1-18A0A0C4DH31 117 aa14.29□□□□□ -0.12
SPAST-202ENST00000345662 K7EP34 96 aa14.29□□□□□ -0.12
SPAST-202ENST00000345662 CFHR1Q03591 330 aa14.29□□□□□ -0.12
SPAST-202ENST00000345662 METRNQ9UJH8 293 aa14.29□□□□□ -0.12
SPAST-202ENST00000345662 KIR2DL5BA0A0G2JN68 375 aa14.28□□□□□ -0.12
SPAST-202ENST00000345662 KIR2DL5BA0A0G2JPC4 375 aa14.28□□□□□ -0.12
SPAST-202ENST00000345662 Q86TA4 180 aa14.28□□□□□ -0.12
SPAST-202ENST00000345662 KIR2DL5AQ8N109 375 aa14.28□□□□□ -0.12
SPAST-202ENST00000345662 LYPD1Q8N2G4 141 aa14.28□□□□□ -0.12
SPAST-202ENST00000345662 MBNL3Q9NUK0 354 aaKnown RBP14.28□□□□□ -0.12
SPAST-202ENST00000345662 CD28P10747 220 aa14.28□□□□□ -0.12
SPAST-202ENST00000345662 SELLP14151 372 aa14.28□□□□□ -0.12
SPAST-202ENST00000345662 DUX3Q96PT4 197 aa14.28□□□□□ -0.12
SPAST-202ENST00000345662 RNASE2P10153 161 aaKnown RBP14.28□□□□□ -0.12
SPAST-202ENST00000345662 C2orf82Q6UX34 121 aa14.28□□□□□ -0.12
SPAST-202ENST00000345662 KIAA2026Q5HYC2 2103 aa14.27□□□□□ -0.12
SPAST-202ENST00000345662 SLAQ13239 276 aa14.27□□□□□ -0.12
SPAST-202ENST00000345662 CT83Q5H943 113 aa14.27□□□□□ -0.12
SPAST-202ENST00000345662 COA6Q5JTJ3 125 aaKnown RBP14.27□□□□□ -0.12
SPAST-202ENST00000345662 GLMPQ8WWB7 406 aa14.27□□□□□ -0.12
SPAST-202ENST00000345662 SPANXA1Q9NS26 97 aa14.27□□□□□ -0.12
SPAST-202ENST00000345662 ZNF492Q9P255 531 aa14.27□□□□□ -0.12
SPAST-202ENST00000345662 IGHV3-64A0A075B6Q5 118 aa14.27□□□□□ -0.13
SPAST-202ENST00000345662 CEP250Q9BV73 2442 aa14.27□□□□□ -0.13
SPAST-202ENST00000345662 AKAP6Q13023 2319 aa14.27□□□□□ -0.13
SPAST-202ENST00000345662 COX8AP10176 69 aa14.27□□□□□ -0.13
SPAST-202ENST00000345662 ZNF562Q6V9R5 426 aa14.27□□□□□ -0.13
SPAST-202ENST00000345662 SPAG8Q99932 426 aaPredicted RBP14.27□□□□□ -0.13
SPAST-202ENST00000345662 FANCMQ8IYD8 2048 aa14.27□□□□□ -0.13
SPAST-202ENST00000345662 IGKV3D-20A0A0C4DH25 116 aa14.27□□□□□ -0.13
SPAST-202ENST00000345662 ARMS2P0C7Q2 107 aa14.27□□□□□ -0.13
SPAST-202ENST00000345662 CDKN1BP46527 198 aa14.27□□□□□ -0.13
SPAST-202ENST00000345662 ZNF114Q8NC26 417 aa14.27□□□□□ -0.13
SPAST-202ENST00000345662 SMKR1H3BMG3 65 aa14.26□□□□□ -0.13
SPAST-202ENST00000345662 PRB3Q04118 309 aaPredicted RBP14.26□□□□□ -0.13
SPAST-202ENST00000345662 PLEKHB2Q96CS7 222 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms