RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CSRP3P50461 194 aa16.17■□□□□ 0.18
HDAC4-201ENST00000345617 UTF1Q5T230 341 aa16.17■□□□□ 0.18
HDAC4-201ENST00000345617 LINC01551Q86U37 167 aa16.17■□□□□ 0.18
HDAC4-201ENST00000345617 SSC4DQ8WTU2 575 aa16.16■□□□□ 0.18
HDAC4-201ENST00000345617 ITLN2Q8WWU7 325 aaPredicted RBP16.16■□□□□ 0.18
HDAC4-201ENST00000345617 RBMY1FQ15415 496 aaKnown RBP16.16■□□□□ 0.18
HDAC4-201ENST00000345617 VCYO14598 125 aa16.16■□□□□ 0.18
HDAC4-201ENST00000345617 SRSF3P84103 164 aaKnown RBP16.16■□□□□ 0.18
HDAC4-201ENST00000345617 GGTLC1Q9BX51 225 aa16.16■□□□□ 0.18
HDAC4-201ENST00000345617 PRR32B1ATL7 298 aa16.16■□□□□ 0.18
HDAC4-201ENST00000345617 SIGLEC15Q6ZMC9 328 aa16.15■□□□□ 0.18
HDAC4-201ENST00000345617 HAPLN4Q86UW8 402 aa16.15■□□□□ 0.18
HDAC4-201ENST00000345617 SLC22A18ASQ8N1D0 253 aa16.15■□□□□ 0.18
HDAC4-201ENST00000345617 A8MWP6 167 aa16.15■□□□□ 0.18
HDAC4-201ENST00000345617 ZIC3O60481 467 aa16.15■□□□□ 0.18
HDAC4-201ENST00000345617 D6R8Y8 96 aa16.15■□□□□ 0.18
HDAC4-201ENST00000345617 DUTP33316 252 aaKnown RBP16.15■□□□□ 0.18
HDAC4-201ENST00000345617 GLRX5Q86SX6 157 aa16.15■□□□□ 0.18
HDAC4-201ENST00000345617 RASL10AQ92737 203 aa16.15■□□□□ 0.18
HDAC4-201ENST00000345617 THSD7AQ9UPZ6 1657 aa16.15■□□□□ 0.18
HDAC4-201ENST00000345617 GFI1BQ5VTD9 330 aa16.15■□□□□ 0.18
HDAC4-201ENST00000345617 PDE6HQ13956 83 aa16.15■□□□□ 0.18
HDAC4-201ENST00000345617 ID3Q02535 119 aa16.14■□□□□ 0.17
HDAC4-201ENST00000345617 ADAMTSL5Q6ZMM2 481 aa16.14■□□□□ 0.17
HDAC4-201ENST00000345617 SONP18583 2426 aaKnown RBP16.14■□□□□ 0.17
HDAC4-201ENST00000345617 ZNF48Q96MX3 618 aaPredicted RBP16.14■□□□□ 0.17
HDAC4-201ENST00000345617 PSG8Q9UQ74 426 aa16.14■□□□□ 0.17
HDAC4-201ENST00000345617 A0A1W2PQF6 199 aa16.14■□□□□ 0.17
HDAC4-201ENST00000345617 WFDC6Q9BQY6 131 aa16.14■□□□□ 0.17
HDAC4-201ENST00000345617 EFEMP2O95967 443 aa16.14■□□□□ 0.17
HDAC4-201ENST00000345617 LINC00114Q6XXX2 140 aa16.14■□□□□ 0.17
HDAC4-201ENST00000345617 TRGV9Q99603 122 aa16.14■□□□□ 0.17
HDAC4-201ENST00000345617 C20orf144Q9BQM9 153 aa16.14■□□□□ 0.17
HDAC4-201ENST00000345617 TRACP01848 142 aa16.14■□□□□ 0.17
HDAC4-201ENST00000345617 ADARB2-AS1A8MUL3 147 aa16.14■□□□□ 0.17
HDAC4-201ENST00000345617 MMP23AO75900 390 aa16.14■□□□□ 0.17
HDAC4-201ENST00000345617 IL18BPO95998 194 aa16.13■□□□□ 0.17
HDAC4-201ENST00000345617 IGKV3-20P01619 116 aa16.13■□□□□ 0.17
HDAC4-201ENST00000345617 PRADC1Q9BSG0 188 aa16.13■□□□□ 0.17
HDAC4-201ENST00000345617 GNG5P63218 68 aa16.13■□□□□ 0.17
HDAC4-201ENST00000345617 CUL9Q8IWT3 2517 aa16.13■□□□□ 0.17
HDAC4-201ENST00000345617 TNS1Q9HBL0 1735 aaKnown RBP16.13■□□□□ 0.17
HDAC4-201ENST00000345617 SPATA31B1PQ5VZV4 182 aa16.13■□□□□ 0.17
HDAC4-201ENST00000345617 PRTN3P24158 256 aa16.13■□□□□ 0.17
HDAC4-201ENST00000345617 ITGBL1O95965 494 aaPredicted RBP16.12■□□□□ 0.17
HDAC4-201ENST00000345617 LINC01545Q5VT33 79 aa16.12■□□□□ 0.17
HDAC4-201ENST00000345617 GATD1Q8NB37 220 aa16.12■□□□□ 0.17
HDAC4-201ENST00000345617 CXCL1P09341 107 aa16.12■□□□□ 0.17
HDAC4-201ENST00000345617 LINC00158P58513 81 aa16.12■□□□□ 0.17
HDAC4-201ENST00000345617 FAM231BA6NCW3 169 aa16.12■□□□□ 0.17
HDAC4-201ENST00000345617 C1QL2Q7Z5L3 287 aa16.12■□□□□ 0.17
HDAC4-201ENST00000345617 J3QRE1 110 aa16.12■□□□□ 0.17
HDAC4-201ENST00000345617 SRSF2Q01130 221 aaKnown RBP16.12■□□□□ 0.17
HDAC4-201ENST00000345617 MORN2Q502X0 79 aa16.12■□□□□ 0.17
HDAC4-201ENST00000345617 FBXL15Q9H469 300 aa16.12■□□□□ 0.17
HDAC4-201ENST00000345617 MUC21A0A0G2JKD1 596 aa16.12■□□□□ 0.17
HDAC4-201ENST00000345617 MUC21A0A140T8X8 626 aa16.12■□□□□ 0.17
HDAC4-201ENST00000345617 MUC21Q5SSG8 566 aa16.12■□□□□ 0.17
HDAC4-201ENST00000345617 SPSB3Q6PJ21 355 aa16.12■□□□□ 0.17
HDAC4-201ENST00000345617 GAGE2AQ6NT46 116 aa16.11■□□□□ 0.17
HDAC4-201ENST00000345617 UBL5Q9BZL1 73 aa16.11■□□□□ 0.17
HDAC4-201ENST00000345617 A0A087X0K7 114 aa16.11■□□□□ 0.17
HDAC4-201ENST00000345617 STHQ8IWL8 128 aa16.11■□□□□ 0.17
HDAC4-201ENST00000345617 CHCHD2Q9Y6H1 151 aaPredicted RBP16.11■□□□□ 0.17
HDAC4-201ENST00000345617 EVI2AP22794 236 aa16.11■□□□□ 0.17
HDAC4-201ENST00000345617 PROB1E7EW31 1015 aa16.11■□□□□ 0.17
HDAC4-201ENST00000345617 SOCS3O14543 225 aa16.11■□□□□ 0.17
HDAC4-201ENST00000345617 PAX4O43316 350 aa16.11■□□□□ 0.17
HDAC4-201ENST00000345617 RPP25Q9BUL9 199 aaKnown RBP16.11■□□□□ 0.17
HDAC4-201ENST00000345617 PSG1P11464 419 aa16.11■□□□□ 0.17
HDAC4-201ENST00000345617 MPV17L2Q567V2 206 aa16.11■□□□□ 0.17
HDAC4-201ENST00000345617 CITED2Q99967 270 aaPredicted RBP16.11■□□□□ 0.17
HDAC4-201ENST00000345617 SRSF8Q9BRL6 282 aaKnown RBP16.11■□□□□ 0.17
HDAC4-201ENST00000345617 GTSCR1Q86UQ5 136 aa16.1■□□□□ 0.17
HDAC4-201ENST00000345617 OR13A1Q8NGR1 328 aa16.1■□□□□ 0.17
HDAC4-201ENST00000345617 TIMM21Q9BVV7 248 aa16.1■□□□□ 0.17
HDAC4-201ENST00000345617 NUP35Q8NFH5 326 aa16.1■□□□□ 0.17
HDAC4-201ENST00000345617 CLEC19AQ6UXS0 136 aa16.1■□□□□ 0.17
HDAC4-201ENST00000345617 NRTNQ99748 197 aa16.1■□□□□ 0.17
HDAC4-201ENST00000345617 C9orf50Q5SZB4 431 aa16.1■□□□□ 0.17
HDAC4-201ENST00000345617 DPH3P1Q9H4G8 78 aa16.1■□□□□ 0.17
HDAC4-201ENST00000345617 ATP6V0BQ99437 205 aa16.09■□□□□ 0.17
HDAC4-201ENST00000345617 DSCAMO60469 2012 aa16.09■□□□□ 0.17
HDAC4-201ENST00000345617 IGHV2OR16-5A0A0B4J2B6 119 aa16.09■□□□□ 0.17
HDAC4-201ENST00000345617 CD300EQ496F6 205 aaPredicted RBP16.09■□□□□ 0.17
HDAC4-201ENST00000345617 SMAD7O15105 426 aaKnown RBP16.09■□□□□ 0.17
HDAC4-201ENST00000345617 NDUFS6O75380 124 aaKnown RBP16.09■□□□□ 0.17
HDAC4-201ENST00000345617 TMEM133Q9H2Q1 129 aa16.09■□□□□ 0.17
HDAC4-201ENST00000345617 FAM208BQ5VWN6 2430 aa16.09■□□□□ 0.17
HDAC4-201ENST00000345617 LOC101059948A0A1B0GTJ6 334 aa16.09■□□□□ 0.17
HDAC4-201ENST00000345617 IGHG4P01861 327 aa16.09■□□□□ 0.17
HDAC4-201ENST00000345617 RPL32P62910 135 aaKnown RBP16.09■□□□□ 0.17
HDAC4-201ENST00000345617 KIAA1671Q9BY89 1806 aa16.09■□□□□ 0.17
HDAC4-201ENST00000345617 TREML4Q6UXN2 200 aa16.08■□□□□ 0.17
HDAC4-201ENST00000345617 SLC25A28Q96A46 364 aa16.08■□□□□ 0.17
HDAC4-201ENST00000345617 LY6EQ16553 131 aa16.08■□□□□ 0.16
HDAC4-201ENST00000345617 REG4Q9BYZ8 158 aa16.08■□□□□ 0.16
HDAC4-201ENST00000345617 CRYBA2P53672 197 aa16.08■□□□□ 0.16
HDAC4-201ENST00000345617 Q0VG73 95 aa16.08■□□□□ 0.16
HDAC4-201ENST00000345617 LINC00477Q96M19 166 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms