RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 PSMG3Q9BT73 122 aaPredicted RBP10.5□□□□□ -0.73
TPM4-202ENST00000344824 PBDC1Q9BVG4 233 aa10.5□□□□□ -0.73
TPM4-202ENST00000344824 VSIRQ9H7M9 311 aa10.5□□□□□ -0.73
TPM4-202ENST00000344824 KCNIP2Q9NS61 270 aa10.5□□□□□ -0.73
TPM4-202ENST00000344824 SLC39A9Q9NUM3 307 aa10.5□□□□□ -0.73
TPM4-202ENST00000344824 OR2C1O95371 312 aa10.49□□□□□ -0.73
TPM4-202ENST00000344824 TOMM40O96008 361 aa10.49□□□□□ -0.73
TPM4-202ENST00000344824 GP9P14770 177 aa10.49□□□□□ -0.73
TPM4-202ENST00000344824 RAB2AP61019 212 aa10.49□□□□□ -0.73
TPM4-202ENST00000344824 SELENOTP62341 195 aa10.49□□□□□ -0.73
TPM4-202ENST00000344824 PRR20EP86478 221 aa10.49□□□□□ -0.73
TPM4-202ENST00000344824 PRR20CP86479 221 aa10.49□□□□□ -0.73
TPM4-202ENST00000344824 PRR20DP86480 221 aa10.49□□□□□ -0.73
TPM4-202ENST00000344824 PRR20BP86481 221 aa10.49□□□□□ -0.73
TPM4-202ENST00000344824 PRR20AP86496 221 aa10.49□□□□□ -0.73
TPM4-202ENST00000344824 GCSAMLQ5JQS6 135 aa10.49□□□□□ -0.73
TPM4-202ENST00000344824 SPSB3Q6PJ21 355 aa10.49□□□□□ -0.73
TPM4-202ENST00000344824 ZNF680Q8NEM1 530 aa10.49□□□□□ -0.73
TPM4-202ENST00000344824 OR1B1Q8NGR6 318 aa10.49□□□□□ -0.73
TPM4-202ENST00000344824 PEMTQ9UBM1 199 aa10.49□□□□□ -0.73
TPM4-202ENST00000344824 PUS1Q9Y606 427 aaKnown RBP eCLIP10.49□□□□□ -0.73
TPM4-202ENST00000344824 GGCTO75223 188 aaKnown RBP10.48□□□□□ -0.73
TPM4-202ENST00000344824 IFNA7P01567 189 aa10.48□□□□□ -0.73
TPM4-202ENST00000344824 IL4P05112 153 aa10.48□□□□□ -0.73
TPM4-202ENST00000344824 ORM2P19652 201 aa10.48□□□□□ -0.73
TPM4-202ENST00000344824 YPEL3P61236 119 aaPredicted RBP10.48□□□□□ -0.73
TPM4-202ENST00000344824 FAM209BQ5JX69 171 aa10.48□□□□□ -0.73
TPM4-202ENST00000344824 ZNF600Q6ZNG1 722 aa10.48□□□□□ -0.73
TPM4-202ENST00000344824 Q6ZRG5 221 aa10.48□□□□□ -0.73
TPM4-202ENST00000344824 OR51G1Q8NGK1 321 aa10.48□□□□□ -0.73
TPM4-202ENST00000344824 DYNLRB2Q8TF09 96 aa10.48□□□□□ -0.73
TPM4-202ENST00000344824 Q8WTZ3 238 aa10.48□□□□□ -0.73
TPM4-202ENST00000344824 PHYHIPLQ96FC7 376 aa10.48□□□□□ -0.73
TPM4-202ENST00000344824 UBQLN2Q9UHD9 624 aa10.48□□□□□ -0.73
TPM4-202ENST00000344824 ZNF320A2RRD8 509 aa10.47□□□□□ -0.73
TPM4-202ENST00000344824 COX7A2P2O60397 106 aa10.47□□□□□ -0.73
TPM4-202ENST00000344824 EIF3GO75821 320 aaKnown RBP eCLIP10.47□□□□□ -0.73
TPM4-202ENST00000344824 OR5G3P0C626 314 aa10.47□□□□□ -0.73
TPM4-202ENST00000344824 SERF2P84101 59 aa10.47□□□□□ -0.73
TPM4-202ENST00000344824 RELQ04864 619 aaPredicted RBP10.47□□□□□ -0.73
TPM4-202ENST00000344824 ACOT6Q3I5F7 207 aaPredicted RBP10.47□□□□□ -0.73
TPM4-202ENST00000344824 TMEM41BQ5BJD5 291 aa10.47□□□□□ -0.73
TPM4-202ENST00000344824 FAM122CQ6P4D5 195 aa10.47□□□□□ -0.73
TPM4-202ENST00000344824 PCNPQ8WW12 178 aaKnown RBP10.47□□□□□ -0.73
TPM4-202ENST00000344824 ATP6V0BQ99437 205 aa10.47□□□□□ -0.73
TPM4-202ENST00000344824 SELENOKQ9Y6D0 94 aa10.47□□□□□ -0.73
TPM4-202ENST00000344824 COL7A1Q02388 2944 aa10.46□□□□□ -0.73
TPM4-202ENST00000344824 ZNF207O43670 478 aaKnown RBP10.46□□□□□ -0.74
TPM4-202ENST00000344824 IGLV1-51P01701 117 aa10.46□□□□□ -0.74
TPM4-202ENST00000344824 FHITP49789 147 aa10.46□□□□□ -0.74
TPM4-202ENST00000344824 TOMM20LQ6UXN7 152 aa10.46□□□□□ -0.74
TPM4-202ENST00000344824 OR10G4Q8NGN3 311 aa10.46□□□□□ -0.74
TPM4-202ENST00000344824 OR10G9Q8NGN4 311 aa10.46□□□□□ -0.74
TPM4-202ENST00000344824 OR10G7Q8NGN6 311 aa10.46□□□□□ -0.74
TPM4-202ENST00000344824 FAM213BQ8TBF2 198 aa10.46□□□□□ -0.74
TPM4-202ENST00000344824 RNF125Q96EQ8 232 aa10.46□□□□□ -0.74
TPM4-202ENST00000344824 ZNF414Q96IQ9 312 aa10.46□□□□□ -0.74
TPM4-202ENST00000344824 C20orf24Q9BUV8 137 aa10.46□□□□□ -0.74
TPM4-202ENST00000344824 SMAD5-AS1Q9Y6J3 95 aa10.46□□□□□ -0.74
TPM4-202ENST00000344824 DNAH9Q9NYC9 4486 aa10.45□□□□□ -0.74
TPM4-202ENST00000344824 HYPMO75409 117 aa10.45□□□□□ -0.74
TPM4-202ENST00000344824 CSN3P07498 182 aa10.45□□□□□ -0.74
TPM4-202ENST00000344824 M6PRP20645 277 aa10.45□□□□□ -0.74
TPM4-202ENST00000344824 EDN2P20800 178 aa10.45□□□□□ -0.74
TPM4-202ENST00000344824 SULT1A2P50226 295 aa10.45□□□□□ -0.74
TPM4-202ENST00000344824 USF2Q15853 346 aaPredicted RBP10.45□□□□□ -0.74
TPM4-202ENST00000344824 UHRF2Q96PU4 802 aa10.45□□□□□ -0.74
TPM4-202ENST00000344824 ASCL2Q99929 193 aa10.45□□□□□ -0.74
TPM4-202ENST00000344824 B9D2Q9BPU9 175 aa10.45□□□□□ -0.74
TPM4-202ENST00000344824 SLC25A22Q9H936 323 aa10.45□□□□□ -0.74
TPM4-202ENST00000344824 RPRMQ9NS64 109 aa10.45□□□□□ -0.74
TPM4-202ENST00000344824 A0A1B0GV50 99 aa10.44□□□□□ -0.74
TPM4-202ENST00000344824 ZNF705EA8MWA4 302 aaPredicted RBP10.44□□□□□ -0.74
TPM4-202ENST00000344824 HMGB3O15347 200 aaKnown RBP10.44□□□□□ -0.74
TPM4-202ENST00000344824 MBP02144 154 aa10.44□□□□□ -0.74
TPM4-202ENST00000344824 FAM106AQ4KMX7 169 aa10.44□□□□□ -0.74
TPM4-202ENST00000344824 C10orf113Q5VZT2 155 aa10.44□□□□□ -0.74
TPM4-202ENST00000344824 SPATA31B1PQ5VZV4 182 aa10.44□□□□□ -0.74
TPM4-202ENST00000344824 LCN12Q6JVE5 192 aa10.44□□□□□ -0.74
TPM4-202ENST00000344824 UNQ9165/PRO28630Q6UXU0 137 aa10.44□□□□□ -0.74
TPM4-202ENST00000344824 PATE2Q6UY27 113 aa10.44□□□□□ -0.74
TPM4-202ENST00000344824 IL34Q6ZMJ4 242 aa10.44□□□□□ -0.74
TPM4-202ENST00000344824 OR1L4Q8NGR5 311 aa10.44□□□□□ -0.74
TPM4-202ENST00000344824 TMEM37Q8WXS4 190 aa10.44□□□□□ -0.74
TPM4-202ENST00000344824 ZFAND3Q9H8U3 227 aa10.44□□□□□ -0.74
TPM4-202ENST00000344824 HIGD1AQ9Y241 93 aa10.44□□□□□ -0.74
TPM4-202ENST00000344824 A0A1W2PPV4 95 aa10.43□□□□□ -0.74
TPM4-202ENST00000344824 UMAD1C9J7I0 102 aa10.43□□□□□ -0.74
TPM4-202ENST00000344824 NDUFA4O00483 81 aa10.43□□□□□ -0.74
TPM4-202ENST00000344824 FAM78BQ5VT40 261 aa10.43□□□□□ -0.74
TPM4-202ENST00000344824 ZNF767PQ75MW2 155 aa10.43□□□□□ -0.74
TPM4-202ENST00000344824 RNF141Q8WVD5 230 aa10.43□□□□□ -0.74
TPM4-202ENST00000344824 PFDN5Q99471 154 aa10.43□□□□□ -0.74
TPM4-202ENST00000344824 DNAJC4Q9NNZ3 241 aa10.43□□□□□ -0.74
TPM4-202ENST00000344824 RABAC1Q9UI14 185 aa10.43□□□□□ -0.74
TPM4-202ENST00000344824 IGHV3-49A0A0A0MS15 119 aa10.42□□□□□ -0.74
TPM4-202ENST00000344824 C2orf70A6NJV1 201 aa10.42□□□□□ -0.74
TPM4-202ENST00000344824 FOLR2P14207 255 aa10.42□□□□□ -0.74
TPM4-202ENST00000344824 CDC34P49427 236 aaPredicted RBP10.42□□□□□ -0.74
TPM4-202ENST00000344824 PLP1P60201 277 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms