RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 TRAV10A0A0B4J240 114 aa8.99□□□□□ -0.97
SGCA-202ENST00000344627 SMCO3A2RU48 225 aa8.99□□□□□ -0.97
SGCA-202ENST00000344627 DEDDO75618 318 aa8.99□□□□□ -0.97
SGCA-202ENST00000344627 IFNA21P01568 189 aa8.99□□□□□ -0.97
SGCA-202ENST00000344627 HLA-DMBP28068 263 aa8.99□□□□□ -0.97
SGCA-202ENST00000344627 NKX2-1P43699 371 aaPredicted RBP8.99□□□□□ -0.97
SGCA-202ENST00000344627 DEFB1P60022 68 aa8.99□□□□□ -0.97
SGCA-202ENST00000344627 AKR1C1Q04828 323 aa8.99□□□□□ -0.97
SGCA-202ENST00000344627 GSG1LQ6UXU4 331 aa8.99□□□□□ -0.97
SGCA-202ENST00000344627 OR4B1Q8NGF8 309 aa8.99□□□□□ -0.97
SGCA-202ENST00000344627 RNF126Q9BV68 326 aa8.99□□□□□ -0.97
SGCA-202ENST00000344627 SRRQ9GZT4 340 aa8.99□□□□□ -0.97
SGCA-202ENST00000344627 APLNQ9ULZ1 77 aa8.99□□□□□ -0.97
SGCA-202ENST00000344627 FLVCR2Q9UPI3 526 aa8.99□□□□□ -0.97
SGCA-202ENST00000344627 STRAPQ9Y3F4 350 aaKnown RBP8.99□□□□□ -0.97
SGCA-202ENST00000344627 HECTD4Q9Y4D8 3996 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 IGHV3OR16-12A0A075B7B8 117 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 ELOA3CA0A087WX78 387 aaPredicted RBP8.98□□□□□ -0.97
SGCA-202ENST00000344627 C9orf170A2RU37 121 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 CENPXA8MT69 81 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 ADAP1O75689 374 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 HLA-DRB4P13762 266 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 ORM2P19652 201 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 UBE2MP61081 183 aaKnown RBP8.98□□□□□ -0.97
SGCA-202ENST00000344627 BAK1Q16611 211 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 C1orf194Q5T5A4 169 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 THAP8Q8NA92 274 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 BPIFCQ8NFQ6 507 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 C16orf92Q96LL3 132 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 SLC25A22Q9H936 323 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 HLA-DRB4X5D2U9 266 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 X6R8D5 127 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 DNAH6Q9C0G6 4158 aa8.98□□□□□ -0.97
SGCA-202ENST00000344627 IGKV1OR2-108A0A075B7D4 117 aa8.97□□□□□ -0.97
SGCA-202ENST00000344627 NAP1L6A6NFF2 107 aa8.97□□□□□ -0.97
SGCA-202ENST00000344627 NDUFB6O95139 128 aa8.97□□□□□ -0.97
SGCA-202ENST00000344627 CFDP00746 253 aaPredicted RBP8.97□□□□□ -0.97
SGCA-202ENST00000344627 GATA2P23769 480 aaPredicted RBP8.97□□□□□ -0.97
SGCA-202ENST00000344627 GALR1P47211 349 aa8.97□□□□□ -0.97
SGCA-202ENST00000344627 PSMB3P49720 205 aa8.97□□□□□ -0.97
SGCA-202ENST00000344627 POLR2GP62487 172 aaKnown RBP eCLIP8.97□□□□□ -0.97
SGCA-202ENST00000344627 C4orf46Q504U0 113 aa8.97□□□□□ -0.97
SGCA-202ENST00000344627 GDF5OSQ5U4N7 250 aa8.97□□□□□ -0.97
SGCA-202ENST00000344627 EBLN2Q6P2I7 272 aa8.97□□□□□ -0.97
SGCA-202ENST00000344627 Q6ZTC4 211 aa8.97□□□□□ -0.97
SGCA-202ENST00000344627 ZNF767PQ75MW2 155 aa8.97□□□□□ -0.97
SGCA-202ENST00000344627 CSNK1G2-AS1Q8NCQ2 148 aa8.97□□□□□ -0.97
SGCA-202ENST00000344627 OR1B1Q8NGR6 318 aa8.97□□□□□ -0.97
SGCA-202ENST00000344627 RSG1Q9BU20 258 aa8.97□□□□□ -0.97
SGCA-202ENST00000344627 TMEM147Q9BVK8 224 aa8.97□□□□□ -0.97
SGCA-202ENST00000344627 PSENENQ9NZ42 101 aa8.97□□□□□ -0.97
SGCA-202ENST00000344627 SSSCA1O60232 199 aa8.96□□□□□ -0.98
SGCA-202ENST00000344627 SCGB1D2O95969 90 aa8.96□□□□□ -0.98
SGCA-202ENST00000344627 OR4E1P0C645 316 aa8.96□□□□□ -0.98
SGCA-202ENST00000344627 P0DMU3 169 aa8.96□□□□□ -0.98
SGCA-202ENST00000344627 FAM231AP0DMU4 169 aa8.96□□□□□ -0.98
SGCA-202ENST00000344627 FAM231CP0DMU5 169 aa8.96□□□□□ -0.98
SGCA-202ENST00000344627 ANXA7P20073 488 aaKnown RBP8.96□□□□□ -0.98
SGCA-202ENST00000344627 S100A7P31151 101 aa8.96□□□□□ -0.98
SGCA-202ENST00000344627 EMP1P54849 157 aa8.96□□□□□ -0.98
SGCA-202ENST00000344627 DEFA1P59665 94 aa8.96□□□□□ -0.98
SGCA-202ENST00000344627 DEFA3P59666 94 aa8.96□□□□□ -0.98
SGCA-202ENST00000344627 FOXI2Q6ZQN5 318 aa8.96□□□□□ -0.98
SGCA-202ENST00000344627 C7orf50Q9BRJ6 194 aaKnown RBP8.96□□□□□ -0.98
SGCA-202ENST00000344627 SAV1Q9H4B6 383 aaPredicted RBP8.96□□□□□ -0.98
SGCA-202ENST00000344627 DOK5Q9P104 306 aa8.96□□□□□ -0.98
SGCA-202ENST00000344627 TEX48A0A1B0GUV7 120 aa8.95□□□□□ -0.98
SGCA-202ENST00000344627 TMEM189A5PLL7 270 aa8.95□□□□□ -0.98
SGCA-202ENST00000344627 ZNF98A6NK75 572 aa8.95□□□□□ -0.98
SGCA-202ENST00000344627 AMBPP02760 352 aa8.95□□□□□ -0.98
SGCA-202ENST00000344627 IL5P05113 134 aa8.95□□□□□ -0.98
SGCA-202ENST00000344627 RRAS2P62070 204 aaPredicted RBP8.95□□□□□ -0.98
SGCA-202ENST00000344627 FGL1Q08830 312 aa8.95□□□□□ -0.98
SGCA-202ENST00000344627 ACOT7LQ6ZUV0 252 aa8.95□□□□□ -0.98
SGCA-202ENST00000344627 FAM210BQ96KR6 192 aa8.95□□□□□ -0.98
SGCA-202ENST00000344627 SLC25A32Q9H2D1 315 aa8.95□□□□□ -0.98
SGCA-202ENST00000344627 RPRMQ9NS64 109 aa8.95□□□□□ -0.98
SGCA-202ENST00000344627 GSKIPQ9P0R6 139 aa8.95□□□□□ -0.98
SGCA-202ENST00000344627 CELA1Q9UNI1 258 aa8.95□□□□□ -0.98
SGCA-202ENST00000344627 IGHV4-4A0A075B6R2 117 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 DEFB131BA0A096LNP1 70 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 SMIM9A6NGZ8 99 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 F6UB75 175 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 ISLRO14498 428 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 UPK1BO75841 260 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 IL7P13232 177 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 MEOX2P50222 304 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 PSG9Q00887 426 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 ID3Q02535 119 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 FAM78BQ5VT40 261 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 SAMD13Q5VXD3 122 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 MZT2BQ6NZ67 158 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 TMEM182Q6ZP80 229 aaPredicted RBP8.94□□□□□ -0.98
SGCA-202ENST00000344627 CYP2G1PQ6ZSU1 146 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 TMEM144Q7Z5S9 345 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 NEU1Q99519 415 aa8.94□□□□□ -0.98
SGCA-202ENST00000344627 PRSS46E5RG02 174 aa8.93□□□□□ -0.98
SGCA-202ENST00000344627 SOCS3O14543 225 aa8.93□□□□□ -0.98
SGCA-202ENST00000344627 METTL15P1P0C7V9 234 aa8.93□□□□□ -0.98
SGCA-202ENST00000344627 RAP2BP61225 183 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms