RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 NMSQ5H8A3 153 aa13.29□□□□□ -0.28
SMARCA4-201ENST00000344626 TRAV3A0A0B4J244 114 aa13.28□□□□□ -0.28
SMARCA4-201ENST00000344626 PSG1P11464 419 aa13.28□□□□□ -0.28
SMARCA4-201ENST00000344626 RSPO1Q2MKA7 263 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-201ENST00000344626 ZNF581Q9P0T4 197 aa13.28□□□□□ -0.28
SMARCA4-201ENST00000344626 ZNF833PQ6ZTB9 187 aa13.28□□□□□ -0.28
SMARCA4-201ENST00000344626 A0A1B0GW15 77 aa13.28□□□□□ -0.28
SMARCA4-201ENST00000344626 IGHV2-70P01814 119 aa13.28□□□□□ -0.28
SMARCA4-201ENST00000344626 TREML4Q6UXN2 200 aa13.28□□□□□ -0.28
SMARCA4-201ENST00000344626 TMEM101Q96IK0 257 aa13.28□□□□□ -0.28
SMARCA4-201ENST00000344626 C22orf46C9J442 243 aa13.28□□□□□ -0.28
SMARCA4-201ENST00000344626 SCGB1C2P0DMR2 95 aa13.28□□□□□ -0.28
SMARCA4-201ENST00000344626 HBBP68871 147 aa13.28□□□□□ -0.28
SMARCA4-201ENST00000344626 FBXL19-AS1Q494R0 122 aa13.28□□□□□ -0.28
SMARCA4-201ENST00000344626 ZFP30Q9Y2G7 519 aa13.28□□□□□ -0.28
SMARCA4-201ENST00000344626 LY6G6FQ5SQ64 297 aa13.27□□□□□ -0.28
SMARCA4-201ENST00000344626 TRBV20OR9-2A0A075B6H5 130 aa13.27□□□□□ -0.28
SMARCA4-201ENST00000344626 EPDR1Q9UM22 224 aa13.27□□□□□ -0.28
SMARCA4-201ENST00000344626 IGHV4-59P01825 116 aa13.27□□□□□ -0.29
SMARCA4-201ENST00000344626 SYNJ2BPP57105 145 aa13.27□□□□□ -0.29
SMARCA4-201ENST00000344626 PRDM13Q9H4Q3 707 aa13.27□□□□□ -0.29
SMARCA4-201ENST00000344626 CD7P09564 240 aa13.27□□□□□ -0.29
SMARCA4-201ENST00000344626 C17orf58Q2M2W7 97 aa13.27□□□□□ -0.29
SMARCA4-201ENST00000344626 FAM120AOSQ5T036 256 aa13.27□□□□□ -0.29
SMARCA4-201ENST00000344626 SOX21Q9Y651 276 aaPredicted RBP13.27□□□□□ -0.29
SMARCA4-201ENST00000344626 SCO2A0A1W2PP80 73 aa13.26□□□□□ -0.29
SMARCA4-201ENST00000344626 C9orf139Q6ZV77 190 aa13.26□□□□□ -0.29
SMARCA4-201ENST00000344626 VN1R17PQ8TDU5 208 aa13.26□□□□□ -0.29
SMARCA4-201ENST00000344626 RPP21Q9H633 154 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-201ENST00000344626 RPL35AP18077 110 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-201ENST00000344626 LINC00205P59089 165 aa13.26□□□□□ -0.29
SMARCA4-201ENST00000344626 SUPT4H1P63272 117 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-201ENST00000344626 WFDC11Q8NEX6 87 aa13.26□□□□□ -0.29
SMARCA4-201ENST00000344626 MIEN1Q9BRT3 115 aa13.26□□□□□ -0.29
SMARCA4-201ENST00000344626 C1QTNF4Q9BXJ3 329 aa13.26□□□□□ -0.29
SMARCA4-201ENST00000344626 DSCAMO60469 2012 aa13.26□□□□□ -0.29
SMARCA4-201ENST00000344626 IGKV1-16P04430 117 aa13.26□□□□□ -0.29
SMARCA4-201ENST00000344626 RPL13AP40429 203 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-201ENST00000344626 OR11H12B2RN74 326 aa13.25□□□□□ -0.29
SMARCA4-201ENST00000344626 FER1L6-AS1Q8NA97 138 aa13.25□□□□□ -0.29
SMARCA4-201ENST00000344626 MCRIP2Q9BUT9 160 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-201ENST00000344626 PLXNB3Q9ULL4 1909 aa13.25□□□□□ -0.29
SMARCA4-201ENST00000344626 ATP6V0E1O15342 81 aa13.25□□□□□ -0.29
SMARCA4-201ENST00000344626 ATP5G3P48201 142 aa13.25□□□□□ -0.29
SMARCA4-201ENST00000344626 MRPL18Q9H0U6 180 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-201ENST00000344626 DAZ1Q9NQZ3 744 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-201ENST00000344626 LINC01619G3V211 115 aa13.25□□□□□ -0.29
SMARCA4-201ENST00000344626 FGF16O43320 207 aa13.25□□□□□ -0.29
SMARCA4-201ENST00000344626 IGLV3-1P01715 115 aa13.25□□□□□ -0.29
SMARCA4-201ENST00000344626 SLC25A39Q9BZJ4 359 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-201ENST00000344626 OBSL1O75147 1896 aa13.25□□□□□ -0.29
SMARCA4-201ENST00000344626 TOMM40O96008 361 aa13.25□□□□□ -0.29
SMARCA4-201ENST00000344626 WFDC12Q8WWY7 111 aa13.25□□□□□ -0.29
SMARCA4-201ENST00000344626 PYYP10082 97 aa13.24□□□□□ -0.29
SMARCA4-201ENST00000344626 A0A1B0GUT8 65 aa13.24□□□□□ -0.29
SMARCA4-201ENST00000344626 PSG8Q9UQ74 426 aa13.24□□□□□ -0.29
SMARCA4-201ENST00000344626 FOXL1Q12952 345 aa13.24□□□□□ -0.29
SMARCA4-201ENST00000344626 OR5AN1Q8NGI8 311 aa13.24□□□□□ -0.29
SMARCA4-201ENST00000344626 OR1N2Q8NGR9 330 aa13.24□□□□□ -0.29
SMARCA4-201ENST00000344626 GGTLC1Q9BX51 225 aa13.24□□□□□ -0.29
SMARCA4-201ENST00000344626 ZNF688P0C7X2 276 aa13.23□□□□□ -0.29
SMARCA4-201ENST00000344626 LYRM7Q5U5X0 104 aa13.23□□□□□ -0.29
SMARCA4-201ENST00000344626 TMEM14EPQ6UXP3 125 aa13.23□□□□□ -0.29
SMARCA4-201ENST00000344626 FNDC10F2Z333 226 aa13.23□□□□□ -0.29
SMARCA4-201ENST00000344626 G3V318 75 aa13.23□□□□□ -0.29
SMARCA4-201ENST00000344626 OVOL3O00110 214 aa13.23□□□□□ -0.29
SMARCA4-201ENST00000344626 H0YIZ8 118 aa13.23□□□□□ -0.29
SMARCA4-201ENST00000344626 RPL15P61313 204 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-201ENST00000344626 ZNF324O75467 553 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-201ENST00000344626 RHPN1-AS1Q9BWJ2 59 aa13.22□□□□□ -0.29
SMARCA4-201ENST00000344626 IGKV3OR2-268A0A0C4DH90 116 aa13.22□□□□□ -0.29
SMARCA4-201ENST00000344626 CCL20P78556 96 aa13.22□□□□□ -0.29
SMARCA4-201ENST00000344626 MUC21Q5SSG8 566 aa13.22□□□□□ -0.29
SMARCA4-201ENST00000344626 BIVMQ86UB2 503 aa13.22□□□□□ -0.29
SMARCA4-201ENST00000344626 RNASE2P10153 161 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-201ENST00000344626 REC114Q7Z4M0 266 aa13.22□□□□□ -0.29
SMARCA4-201ENST00000344626 SRSF9Q13242 221 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMARCA4-201ENST00000344626 DTX2Q86UW9 622 aa13.22□□□□□ -0.29
SMARCA4-201ENST00000344626 IGKV1-6A0A0C4DH72 117 aa13.21□□□□□ -0.29
SMARCA4-201ENST00000344626 ZNF98A6NK75 572 aa13.21□□□□□ -0.29
SMARCA4-201ENST00000344626 M0R3E3 92 aa13.21□□□□□ -0.29
SMARCA4-201ENST00000344626 TMEM158Q8WZ71 300 aa13.21□□□□□ -0.29
SMARCA4-201ENST00000344626 GNG5P63218 68 aa13.21□□□□□ -0.29
SMARCA4-201ENST00000344626 C8orf31Q8N9H6 132 aa13.21□□□□□ -0.29
SMARCA4-201ENST00000344626 ZNF502Q8TBZ5 544 aa13.21□□□□□ -0.29
SMARCA4-201ENST00000344626 GEMIN7Q9H840 131 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-201ENST00000344626 GRIFINA4D1Z8 144 aa13.21□□□□□ -0.29
SMARCA4-201ENST00000344626 CACNG7P62955 275 aa13.21□□□□□ -0.29
SMARCA4-201ENST00000344626 LCN12Q6JVE5 192 aa13.21□□□□□ -0.29
SMARCA4-201ENST00000344626 IL36BQ9NZH7 164 aa13.21□□□□□ -0.29
SMARCA4-201ENST00000344626 IGHV4-38-2P0DP08 117 aa13.21□□□□□ -0.3
SMARCA4-201ENST00000344626 NDPQ00604 133 aa13.21□□□□□ -0.3
SMARCA4-201ENST00000344626 TRGV4A0A0C4DH28 118 aa13.21□□□□□ -0.3
SMARCA4-201ENST00000344626 OR10AG1Q8NH19 301 aa13.21□□□□□ -0.3
SMARCA4-201ENST00000344626 VPREB3Q9UKI3 123 aa13.21□□□□□ -0.3
SMARCA4-201ENST00000344626 PMS2P5A8MQ11 134 aa13.2□□□□□ -0.3
SMARCA4-201ENST00000344626 MRAPQ8TCY5 172 aa13.2□□□□□ -0.3
SMARCA4-201ENST00000344626 TBX15Q96SF7 602 aa13.2□□□□□ -0.3
SMARCA4-201ENST00000344626 C15orf65H3BRN8 121 aa13.2□□□□□ -0.3
SMARCA4-201ENST00000344626 SRP19P09132 144 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms