RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SCGB1A1P11684 91 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 KIR3DS1Q14943 382 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 FAM71F2Q6NXP2 309 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 RNASE6Q93091 150 aaKnown RBP6.61□□□□□ -1.35
UBE4B-202ENST00000343090 LINC00527Q9UJ94 153 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 SLC25A15Q9Y619 301 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 PLXNA2O75051 1894 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 K7EP13 123 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 COX6CP09669 75 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 IGLL1P15814 213 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 DUX5Q96PT3 197 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 ACACAQ13085 2346 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 DOCK7Q96N67 2140 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 ZNF407Q9C0G0 2248 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 IGKV3OR2-268A0A0C4DH90 116 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 LGALS3P17931 250 aaKnown RBP6.61□□□□□ -1.35
UBE4B-202ENST00000343090 YPEL3P61236 119 aaPredicted RBP6.61□□□□□ -1.35
UBE4B-202ENST00000343090 ZNF585BQ52M93 769 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 PROK2Q9HC23 129 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 SYS1-DBNDD2H3BUS1 97 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 RNASE4P34096 147 aaKnown RBP6.61□□□□□ -1.35
UBE4B-202ENST00000343090 RPL15P61313 204 aaKnown RBP6.61□□□□□ -1.35
UBE4B-202ENST00000343090 EXOC3-AS1Q8N2X6 119 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 CIARTQ8N365 385 aaPredicted RBP6.61□□□□□ -1.35
UBE4B-202ENST00000343090 FAM169BQ8N8A8 192 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 CHCHD1Q96BP2 118 aaKnown RBP6.61□□□□□ -1.35
UBE4B-202ENST00000343090 HEATR1Q9H583 2144 aaKnown RBP6.61□□□□□ -1.35
UBE4B-202ENST00000343090 MRPL27Q9P0M9 148 aaKnown RBP6.61□□□□□ -1.35
UBE4B-202ENST00000343090 PKDREJQ9NTG1 2253 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 C15orf62A8K5M9 175 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 PRSS47A8MTI9 375 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 MMP23AO75900 390 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 APOMO95445 188 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 ASCL4Q6XD76 172 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 CENPVQ7Z7K6 275 aaPredicted RBP6.6□□□□□ -1.35
UBE4B-202ENST00000343090 BEX4Q9NWD9 120 aaPredicted RBP6.6□□□□□ -1.35
UBE4B-202ENST00000343090 MRPL16Q9NX20 251 aaKnown RBP6.6□□□□□ -1.35
UBE4B-202ENST00000343090 FAM90A9PA6NNJ1 464 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 KLRD1Q13241 179 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 KLF17Q5JT82 389 aaPredicted RBP6.6□□□□□ -1.35
UBE4B-202ENST00000343090 ORMDL3Q8N138 153 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 RNF166Q96A37 237 aaPredicted RBP6.6□□□□□ -1.35
UBE4B-202ENST00000343090 ATP6V0BQ99437 205 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 ASCL2Q99929 193 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 PSG8Q9UQ74 426 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 LY6G6EA0A0G2JKS1 128 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 IGLC7A0M8Q6 106 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 ZNF503-AS2A6NEH8 195 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 PAX9P55771 341 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 GUSBP1Q15486 140 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 TMEM170BQ5T4T1 132 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 TTC9CQ8N5M4 171 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 NEU4Q8WWR8 484 aaPredicted RBP6.6□□□□□ -1.35
UBE4B-202ENST00000343090 MRAP2Q96G30 205 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 KIR2DL4Q99706 377 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 PYGO2Q9BRQ0 406 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 SCRT1Q9BWW7 348 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 U3KQA8 63 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 NBASA2RRP1 2371 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 NDUFA3O95167 84 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 EVI2AP22794 236 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 ADAMTSL5Q6ZMM2 481 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 WFDC12Q8WWY7 111 aa6.6□□□□□ -1.35
UBE4B-202ENST00000343090 TRBV6-6A0A0A6YYG2 114 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 OR11H12B2RN74 326 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 AZU1P20160 251 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 LEPP41159 167 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 ASIPP42127 132 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 OR11H1Q8NG94 326 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 OR11H2Q8NH07 326 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 TSSC4Q9Y5U2 329 aaPredicted RBP6.59□□□□□ -1.35
UBE4B-202ENST00000343090 PMS2P5A8MQ11 134 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 RSPO1Q2MKA7 263 aaPredicted RBP6.59□□□□□ -1.35
UBE4B-202ENST00000343090 ZNF114Q8NC26 417 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 GAFA1Q96PS6 74 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 CYSLTR1Q9Y271 337 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 SOX21Q9Y651 276 aaPredicted RBP6.59□□□□□ -1.35
UBE4B-202ENST00000343090 CEACAM4O75871 244 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 PF4P02776 101 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 IGKV1-16P04430 117 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 SNRPD3P62318 126 aaKnown RBP6.59□□□□□ -1.35
UBE4B-202ENST00000343090 CACNG7P62955 275 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 RHOGP84095 191 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 GAGE13Q4V321 117 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 SCGB3A1Q96QR1 104 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 C7orf69Q9H7B7 122 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 COL6A6A6NMZ7 2263 aa6.59□□□□□ -1.35
UBE4B-202ENST00000343090 INTS1Q8N201 2190 aaKnown RBP6.59□□□□□ -1.35
UBE4B-202ENST00000343090 LY6HO94772 140 aa6.59□□□□□ -1.36
UBE4B-202ENST00000343090 EMP1P54849 157 aa6.59□□□□□ -1.36
UBE4B-202ENST00000343090 HAPLN4Q86UW8 402 aa6.59□□□□□ -1.36
UBE4B-202ENST00000343090 SPACA3Q8IXA5 215 aa6.59□□□□□ -1.36
UBE4B-202ENST00000343090 ZNF479Q96JC4 524 aa6.59□□□□□ -1.36
UBE4B-202ENST00000343090 DIDO1Q9BTC0 2240 aaKnown RBP6.58□□□□□ -1.36
UBE4B-202ENST00000343090 IGKV2-40A0A087WW87 121 aaPredicted RBP6.58□□□□□ -1.36
UBE4B-202ENST00000343090 PSMB11A5LHX3 300 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 SMAD7O15105 426 aaKnown RBP6.58□□□□□ -1.36
UBE4B-202ENST00000343090 SAP30O75446 220 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 TGFAP01135 160 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 IGKV2D-40P01614 121 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms