RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 NEUROG1Q92886 237 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 TRGV9Q99603 122 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 MMP23AO75900 390 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 TYMSP04818 313 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 LCN12Q6JVE5 192 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 EBLN2Q6P2I7 272 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 NIT1Q86X76 327 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 ZNF114Q8NC26 417 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 BEND2Q8NDZ0 799 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 A0A1W2PPI3 338 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 PDLIM4P50479 330 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 LYRM7Q5U5X0 104 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 DMRTA1Q5VZB9 504 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 C11orf53Q8IXP5 236 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 NCOR1P1Q9H4R4 102 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 NAV2Q8IVL1 2488 aa5.85□□□□□ -1.47
VCAN-202ENST00000342785 M0R3E3 92 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 COTL1Q14019 142 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 ATP5L2Q7Z4Y8 100 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 IGLV3-9A0A075B6K5 115 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 A1L4Q6 167 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 LY6HO94772 140 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 C3orf79P0CE67 100 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 FABP2P12104 132 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 RHOGP84095 191 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 C17orf58Q2M2W7 97 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 SLC25A39Q9BZJ4 359 aaPredicted RBP5.84□□□□□ -1.47
VCAN-202ENST00000342785 KRTAP27-1Q3LI81 207 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 FAM215AQ9Y5M1 114 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 TRAV8-6A0A0B4J262 113 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 IGHV3-11P01762 117 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 DNLZQ5SXM8 178 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 NUP35Q8NFH5 326 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 RNF5Q99942 180 aa5.84□□□□□ -1.47
VCAN-202ENST00000342785 OR11H12B2RN74 326 aa5.84□□□□□ -1.48
VCAN-202ENST00000342785 THBDP07204 575 aa5.84□□□□□ -1.48
VCAN-202ENST00000342785 OR11H1Q8NG94 326 aa5.84□□□□□ -1.48
VCAN-202ENST00000342785 OR11H2Q8NH07 326 aa5.84□□□□□ -1.48
VCAN-202ENST00000342785 RAXQ9Y2V3 346 aa5.84□□□□□ -1.48
VCAN-202ENST00000342785 OR5AN1Q8NGI8 311 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 PIMREGQ9BSJ6 248 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 NPIPB5A8MRT5 1133 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 PPIFP30405 207 aaKnown RBP5.83□□□□□ -1.48
VCAN-202ENST00000342785 CEACAM8P31997 349 aaPredicted RBP5.83□□□□□ -1.48
VCAN-202ENST00000342785 TMEM155Q4W5P6 130 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 KLF2Q9Y5W3 355 aaPredicted RBP5.83□□□□□ -1.48
VCAN-202ENST00000342785 COL8A2P25067 703 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 PSMB2P49721 201 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 C5orf64Q2M2E5 130 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 NDUFA4L2Q9NRX3 87 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 TMEM160Q9NX00 188 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 GGTLC3B5MD39 225 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 E7EQL1 145 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 IGHV2-70P01814 119 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 WT1-ASQ06250 92 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 FAM74A4Q5TZK3 123 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 IGFL3Q6UXB1 125 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 OR1N2Q8NGR9 330 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 SH2D7A6NKC9 451 aaPredicted RBP5.83□□□□□ -1.48
VCAN-202ENST00000342785 BUB1B-PAK6H3BSN5 160 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 WT1P19544 449 aaPredicted RBP5.83□□□□□ -1.48
VCAN-202ENST00000342785 KLRD1Q13241 179 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 TPTE2P1Q5T6R2 138 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 FAM159AQ6UWV7 190 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 CENPVQ7Z7K6 275 aaPredicted RBP5.83□□□□□ -1.48
VCAN-202ENST00000342785 HIST1H4GQ99525 98 aa5.83□□□□□ -1.48
VCAN-202ENST00000342785 PCDH15Q96QU1 1955 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 IGKV3-20P01619 116 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 Q8TCH9 128 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 ASCL2Q99929 193 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 SLC50A1Q9BRV3 221 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 LINC00527Q9UJ94 153 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 SRRM4A7MD48 611 aaKnown RBP5.82□□□□□ -1.48
VCAN-202ENST00000342785 YPEL3P61236 119 aaPredicted RBP5.82□□□□□ -1.48
VCAN-202ENST00000342785 C7orf69Q9H7B7 122 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 PEF1Q9UBV8 284 aaKnown RBP5.82□□□□□ -1.48
VCAN-202ENST00000342785 DYNLRB2Q8TF09 96 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 SPRY4Q9C004 299 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 LOXP28300 417 aaPredicted RBP5.82□□□□□ -1.48
VCAN-202ENST00000342785 RASL11AQ6T310 242 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 FOXC2Q99958 501 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 A8MWP6 167 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 POU2AF1Q16633 256 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 ERASQ7Z444 233 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 KIR2DL4Q99706 377 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 C2orf88Q9BSF0 95 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 CEP350Q5VT06 3117 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 KIAA1671Q9BY89 1806 aa5.82□□□□□ -1.48
VCAN-202ENST00000342785 ATP5LO75964 103 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 HBDP02042 147 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 RPL15P61313 204 aaKnown RBP5.81□□□□□ -1.48
VCAN-202ENST00000342785 PRR20EP86478 221 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 PRR20CP86479 221 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 PRR20DP86480 221 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 PRR20BP86481 221 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 PRR20AP86496 221 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 Q0VG73 95 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 FAM71F2Q6NXP2 309 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 VMO1Q7Z5L0 202 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 A0A0G2JLM5 398 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms