RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 FBLN7Q53RD9 439 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 TMEM97Q5BJF2 176 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 IGFL4Q6B9Z1 124 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 TEX45Q8NA69 505 aa10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 FNDC4Q9H6D8 234 aaPredicted RBP10.12□□□□□ -0.79
SNRNP48-201ENST00000342415 TRAV8-6A0A0B4J262 113 aa10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 PSG1P11464 419 aa10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 PPP1R27Q86WC6 154 aa10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 RAB1BQ9H0U4 201 aa10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 IGHV3OR16-10A0A075B7F0 116 aa10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 TSPOP30536 169 aa10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 C18orf32Q8TCD1 76 aa10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 DEFB104AQ8WTQ1 72 aa10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 PRELID3AQ96N28 172 aa10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 PYGO2Q9BRQ0 406 aa10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 UBTD1Q9HAC8 227 aa10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 ANKRD11Q6UB99 2663 aaPredicted RBP10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 WNT2P09544 360 aa10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 RPL15P61313 204 aaKnown RBP10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 AMMECR1LQ6DCA0 310 aa10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 CDX4O14627 284 aaPredicted RBP10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 YPEL3P61236 119 aaPredicted RBP10.11□□□□□ -0.79
SNRNP48-201ENST00000342415 STPG4Q8N801 248 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 H3BUT2 72 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 NCR2O95944 276 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 SSBP2P81877 361 aaPredicted RBP10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 UTF1Q5T230 341 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 ZNF788Q6ZQV5 615 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 GAFA1Q96PS6 74 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 TMEM160Q9NX00 188 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 FAM90A9PA6NNJ1 464 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 NPIPB5A8MRT5 1133 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 SCGB1C2P0DMR2 95 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 SFTA2Q6UW10 78 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 ARL6IP6Q8N6S5 226 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 NEUROG1Q92886 237 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 ZNF414Q96IQ9 312 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 TPSG1Q9NRR2 321 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 TMEM14BQ9NUH8 114 aa10.1□□□□□ -0.79
SNRNP48-201ENST00000342415 SMIM17P0DL12 118 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 ZNF257Q9Y2Q1 563 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 ABCA2Q9BZC7 2435 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 MUC22E2RYF6 1773 aaPredicted RBP10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 RPL7P18124 248 aaKnown RBP10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 CNTFRP26992 372 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 MFAP4P55083 255 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 ATP5IP56385 69 aaPredicted RBP10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 PLP1P60201 277 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 CACNG7P62955 275 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 MORN5Q5VZ52 161 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 ZNF502Q8TBZ5 544 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 WDFY4Q6ZS81 3184 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 OR2T8A6NH00 312 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 H0YJW9 148 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 J3QR89 54 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 SRSF9Q13242 221 aaKnown RBP eCLIP10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 C17orf58Q2M2W7 97 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 MYOZ3Q8TDC0 251 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 C20orf144Q9BQM9 153 aa10.09□□□□□ -0.79
SNRNP48-201ENST00000342415 F2RL2O00254 374 aa10.08□□□□□ -0.8
SNRNP48-201ENST00000342415 IGFBPL1Q8WX77 278 aa10.08□□□□□ -0.8
SNRNP48-201ENST00000342415 NUP210LQ5VU65 1888 aa10.08□□□□□ -0.8
SNRNP48-201ENST00000342415 IGLC2P0DOY2 106 aa10.08□□□□□ -0.8
SNRNP48-201ENST00000342415 IGLC3P0DOY3 106 aa10.08□□□□□ -0.8
SNRNP48-201ENST00000342415 KRTAP27-1Q3LI81 207 aa10.08□□□□□ -0.8
SNRNP48-201ENST00000342415 EVI2AP22794 236 aa10.08□□□□□ -0.8
SNRNP48-201ENST00000342415 WT1-ASQ06250 92 aa10.08□□□□□ -0.8
SNRNP48-201ENST00000342415 DNLZQ5SXM8 178 aa10.08□□□□□ -0.8
SNRNP48-201ENST00000342415 FMC1Q96HJ9 113 aa10.08□□□□□ -0.8
SNRNP48-201ENST00000342415 PSG8Q9UQ74 426 aa10.08□□□□□ -0.8
SNRNP48-201ENST00000342415 A0A1W2PPI3 338 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 TCRAP04437 139 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 GPR183P32249 361 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 Q0VG73 95 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 COA6Q5JTJ3 125 aaKnown RBP10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 TPTE2P1Q5T6R2 138 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 SLC25A48Q6ZT89 311 aaKnown RBP10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 Q8TAT8 98 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 Q8TCH9 128 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 TMEM133Q9H2Q1 129 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 A1L4Q6 167 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 BRWD1-AS2P59051 145 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 MEF2CQ06413 473 aaPredicted RBP10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 CENPVQ7Z7K6 275 aaPredicted RBP10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 SPACA3Q8IXA5 215 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 SMKR1H3BMG3 65 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 TIMM23O14925 209 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 GOSR1O95249 250 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 IGLL1P15814 213 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 LOXL3P58215 753 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 TRANK1O15050 2925 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 PROP1O75360 226 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 Q1RN00 199 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 TMEM78Q5T7P6 136 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 YPEL4Q96NS1 127 aa10.07□□□□□ -0.8
SNRNP48-201ENST00000342415 SORL1Q92673 2214 aa10.06□□□□□ -0.8
SNRNP48-201ENST00000342415 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.06□□□□□ -0.8
SNRNP48-201ENST00000342415 ZNF329Q86UD4 541 aa10.06□□□□□ -0.8
SNRNP48-201ENST00000342415 RNASE6Q93091 150 aaKnown RBP10.06□□□□□ -0.8
SNRNP48-201ENST00000342415 RABAC1Q9UI14 185 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms