RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 SELENOTP62341 195 aa10.66□□□□□ -0.7
PMS1-201ENST00000342075 TXN2Q99757 166 aa10.66□□□□□ -0.7
PMS1-201ENST00000342075 CLPSL1A2RUU4 121 aa10.66□□□□□ -0.7
PMS1-201ENST00000342075 RNF152Q8N8N0 203 aa10.66□□□□□ -0.7
PMS1-201ENST00000342075 KLHL30-AS1Q8NEE0 82 aa10.66□□□□□ -0.7
PMS1-201ENST00000342075 SLC25A2Q9BXI2 301 aa10.66□□□□□ -0.7
PMS1-201ENST00000342075 PEF1Q9UBV8 284 aaKnown RBP10.66□□□□□ -0.7
PMS1-201ENST00000342075 TRAV30A0A087WSZ9 112 aa10.65□□□□□ -0.7
PMS1-201ENST00000342075 WI2-2373I1.2A0A1W2PRP0 233 aa10.65□□□□□ -0.7
PMS1-201ENST00000342075 ZNF320A2RRD8 509 aa10.65□□□□□ -0.7
PMS1-201ENST00000342075 HYPMO75409 117 aa10.65□□□□□ -0.7
PMS1-201ENST00000342075 RAB5CP51148 216 aa10.65□□□□□ -0.7
PMS1-201ENST00000342075 Q8WTZ3 238 aa10.65□□□□□ -0.7
PMS1-201ENST00000342075 ACTR3CQ9C0K3 210 aaPredicted RBP10.65□□□□□ -0.7
PMS1-201ENST00000342075 FUT9Q9Y231 359 aa10.65□□□□□ -0.7
PMS1-201ENST00000342075 SEC14L6B5MCN3 397 aa10.65□□□□□ -0.71
PMS1-201ENST00000342075 I3L521 148 aa10.65□□□□□ -0.71
PMS1-201ENST00000342075 NDUFA7O95182 113 aa10.65□□□□□ -0.71
PMS1-201ENST00000342075 COMMD7Q86VX2 200 aa10.65□□□□□ -0.71
PMS1-201ENST00000342075 SAT2Q96F10 170 aaPredicted RBP10.65□□□□□ -0.71
PMS1-201ENST00000342075 UBE2E2Q96LR5 201 aa10.65□□□□□ -0.71
PMS1-201ENST00000342075 KCNIP2Q9NS61 270 aa10.65□□□□□ -0.71
PMS1-201ENST00000342075 CTXND1A0A1B0GTU2 59 aa10.64□□□□□ -0.71
PMS1-201ENST00000342075 SLURP1P55000 103 aa10.64□□□□□ -0.71
PMS1-201ENST00000342075 ZNF600Q6ZNG1 722 aa10.64□□□□□ -0.71
PMS1-201ENST00000342075 OR4F5Q8NH21 305 aa10.64□□□□□ -0.71
PMS1-201ENST00000342075 FAM167A-AS1Q96KT0 104 aa10.64□□□□□ -0.71
PMS1-201ENST00000342075 CITED4Q96RK1 184 aa10.64□□□□□ -0.71
PMS1-201ENST00000342075 RARRES2Q99969 163 aa10.64□□□□□ -0.71
PMS1-201ENST00000342075 SLC25A39Q9BZJ4 359 aaPredicted RBP10.64□□□□□ -0.71
PMS1-201ENST00000342075 MRPL27Q9P0M9 148 aaKnown RBP10.64□□□□□ -0.71
PMS1-201ENST00000342075 MBP02144 154 aa10.64□□□□□ -0.71
PMS1-201ENST00000342075 LGALS1P09382 135 aaKnown RBP10.64□□□□□ -0.71
PMS1-201ENST00000342075 HAGHQ16775 308 aa10.64□□□□□ -0.71
PMS1-201ENST00000342075 HIGD1AQ9Y241 93 aa10.64□□□□□ -0.71
PMS1-201ENST00000342075 OR7C2O60412 319 aa10.63□□□□□ -0.71
PMS1-201ENST00000342075 UBE2G2P60604 165 aa10.63□□□□□ -0.71
PMS1-201ENST00000342075 RHOBP62745 196 aa10.63□□□□□ -0.71
PMS1-201ENST00000342075 BLOC1S1P78537 153 aa10.63□□□□□ -0.71
PMS1-201ENST00000342075 TM4SF20Q53R12 229 aa10.63□□□□□ -0.71
PMS1-201ENST00000342075 LYPD6BQ8NI32 183 aa10.63□□□□□ -0.71
PMS1-201ENST00000342075 GNG13Q9P2W3 67 aa10.63□□□□□ -0.71
PMS1-201ENST00000342075 NUDT19A8MXV4 375 aa10.63□□□□□ -0.71
PMS1-201ENST00000342075 OR11H1Q8NG94 326 aa10.63□□□□□ -0.71
PMS1-201ENST00000342075 NOTCH3Q9UM47 2321 aa10.63□□□□□ -0.71
PMS1-201ENST00000342075 TMEM89A2RUT3 159 aa10.63□□□□□ -0.71
PMS1-201ENST00000342075 STAG3L2P0CL84 134 aa10.63□□□□□ -0.71
PMS1-201ENST00000342075 STAG3L3P0CL85 134 aa10.63□□□□□ -0.71
PMS1-201ENST00000342075 KRTAP24-1Q3LI83 254 aa10.63□□□□□ -0.71
PMS1-201ENST00000342075 MBD3L1Q8WWY6 194 aa10.63□□□□□ -0.71
PMS1-201ENST00000342075 C9JQL5 133 aa10.62□□□□□ -0.71
PMS1-201ENST00000342075 HOXD3P31249 432 aaPredicted RBP10.62□□□□□ -0.71
PMS1-201ENST00000342075 SYNJ2BPP57105 145 aa10.62□□□□□ -0.71
PMS1-201ENST00000342075 PLP1P60201 277 aa10.62□□□□□ -0.71
PMS1-201ENST00000342075 NSUN5P1Q3KNT7 163 aa10.62□□□□□ -0.71
PMS1-201ENST00000342075 TOR2AQ5JU69 321 aa10.62□□□□□ -0.71
PMS1-201ENST00000342075 DPPA3Q6W0C5 159 aa10.62□□□□□ -0.71
PMS1-201ENST00000342075 LINC00862A6NCI5 91 aa10.61□□□□□ -0.71
PMS1-201ENST00000342075 GGCTO75223 188 aaKnown RBP10.61□□□□□ -0.71
PMS1-201ENST00000342075 CDX1P47902 265 aaPredicted RBP10.61□□□□□ -0.71
PMS1-201ENST00000342075 RPEL1Q2QD12 228 aa10.61□□□□□ -0.71
PMS1-201ENST00000342075 OR1L4Q8NGR5 311 aa10.61□□□□□ -0.71
PMS1-201ENST00000342075 C17orf77Q96MU5 243 aa10.61□□□□□ -0.71
PMS1-201ENST00000342075 PFDN5Q99471 154 aa10.61□□□□□ -0.71
PMS1-201ENST00000342075 SORL1Q92673 2214 aa10.61□□□□□ -0.71
PMS1-201ENST00000342075 PKD1L1Q8TDX9 2849 aa10.61□□□□□ -0.71
PMS1-201ENST00000342075 LRRC20Q8TCA0 184 aa10.61□□□□□ -0.71
PMS1-201ENST00000342075 RAX2Q96IS3 184 aa10.61□□□□□ -0.71
PMS1-201ENST00000342075 ELOA3CA0A087WX78 387 aaPredicted RBP10.6□□□□□ -0.71
PMS1-201ENST00000342075 ADARB2-AS1A8MUL3 147 aa10.6□□□□□ -0.71
PMS1-201ENST00000342075 H3BRN7 92 aa10.6□□□□□ -0.71
PMS1-201ENST00000342075 RELQ04864 619 aaPredicted RBP10.6□□□□□ -0.71
PMS1-201ENST00000342075 C4orf3Q8WVX3 66 aa10.6□□□□□ -0.71
PMS1-201ENST00000342075 GAR1Q9NY12 217 aaKnown RBP10.6□□□□□ -0.71
PMS1-201ENST00000342075 ZNF98A6NK75 572 aa10.6□□□□□ -0.71
PMS1-201ENST00000342075 FABP1P07148 127 aa10.6□□□□□ -0.71
PMS1-201ENST00000342075 C8orf88P0DMB2 117 aa10.6□□□□□ -0.71
PMS1-201ENST00000342075 BLNKQ8WV28 456 aa10.6□□□□□ -0.71
PMS1-201ENST00000342075 SHANK2-AS3Q9BTD1 123 aa10.6□□□□□ -0.71
PMS1-201ENST00000342075 RABAC1Q9UI14 185 aa10.6□□□□□ -0.71
PMS1-201ENST00000342075 H3BQ15 152 aa10.6□□□□□ -0.71
PMS1-201ENST00000342075 GCHFRP30047 84 aa10.6□□□□□ -0.71
PMS1-201ENST00000342075 IL34Q6ZMJ4 242 aa10.6□□□□□ -0.71
PMS1-201ENST00000342075 COMMD1Q8N668 190 aa10.6□□□□□ -0.71
PMS1-201ENST00000342075 PFDN2Q9UHV9 154 aa10.6□□□□□ -0.71
PMS1-201ENST00000342075 GP9P14770 177 aa10.59□□□□□ -0.71
PMS1-201ENST00000342075 WFDC12Q8WWY7 111 aa10.59□□□□□ -0.71
PMS1-201ENST00000342075 TMEM190Q8WZ59 177 aa10.59□□□□□ -0.71
PMS1-201ENST00000342075 YTHDF2Q9Y5A9 579 aaKnown RBP10.59□□□□□ -0.71
PMS1-201ENST00000342075 NDUFA4O00483 81 aa10.59□□□□□ -0.71
PMS1-201ENST00000342075 UBE2L3P68036 154 aaKnown RBP10.59□□□□□ -0.71
PMS1-201ENST00000342075 MARC2Q969Z3 335 aa10.59□□□□□ -0.71
PMS1-201ENST00000342075 EIF5A2Q9GZV4 153 aaKnown RBP10.59□□□□□ -0.71
PMS1-201ENST00000342075 TECRQ9NZ01 308 aaKnown RBP10.59□□□□□ -0.71
PMS1-201ENST00000342075 IGKV3-7A0A075B6H7 116 aa10.58□□□□□ -0.72
PMS1-201ENST00000342075 PAGE4O60829 102 aa10.58□□□□□ -0.72
PMS1-201ENST00000342075 ATP6V1G1O75348 118 aa10.58□□□□□ -0.72
PMS1-201ENST00000342075 SCGB2A1O75556 95 aa10.58□□□□□ -0.72
PMS1-201ENST00000342075 ATP5G3P48201 142 aa10.58□□□□□ -0.72
PMS1-201ENST00000342075 IGFL4Q6B9Z1 124 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms