RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 IGLC1P0CG04 106 aa11.59□□□□□ -0.55
TDP2-201ENST00000341060 RAB4AP20338 218 aa11.59□□□□□ -0.55
TDP2-201ENST00000341060 COX7A1P24310 79 aa11.59□□□□□ -0.55
TDP2-201ENST00000341060 ATP5L2Q7Z4Y8 100 aa11.59□□□□□ -0.55
TDP2-201ENST00000341060 VAMP8Q9BV40 100 aa11.59□□□□□ -0.55
TDP2-201ENST00000341060 Q9H3A6 140 aa11.59□□□□□ -0.55
TDP2-201ENST00000341060 HIGD1AQ9Y241 93 aa11.59□□□□□ -0.55
TDP2-201ENST00000341060 M0R143 59 aa11.58□□□□□ -0.56
TDP2-201ENST00000341060 SIAH2O43255 324 aa11.58□□□□□ -0.56
TDP2-201ENST00000341060 TCRAP04437 139 aa11.58□□□□□ -0.56
TDP2-201ENST00000341060 PMCHP20382 165 aa11.58□□□□□ -0.56
TDP2-201ENST00000341060 KRTDAPP60985 99 aa11.58□□□□□ -0.56
TDP2-201ENST00000341060 FBXL19-AS1Q494R0 122 aa11.58□□□□□ -0.56
TDP2-201ENST00000341060 ZNF672Q499Z4 452 aaPredicted RBP11.58□□□□□ -0.56
TDP2-201ENST00000341060 LEMD1Q68G75 181 aa11.58□□□□□ -0.56
TDP2-201ENST00000341060 Q8N976 141 aa11.58□□□□□ -0.56
TDP2-201ENST00000341060 SGK494Q96LW2 274 aa11.58□□□□□ -0.56
TDP2-201ENST00000341060 GSX1Q9H4S2 264 aaPredicted RBP11.58□□□□□ -0.56
TDP2-201ENST00000341060 RPH3ALQ9UNE2 315 aa11.58□□□□□ -0.56
TDP2-201ENST00000341060 PAM16Q9Y3D7 125 aa11.58□□□□□ -0.56
TDP2-201ENST00000341060 NBASA2RRP1 2371 aa11.58□□□□□ -0.56
TDP2-201ENST00000341060 I3L2K1 104 aa11.57□□□□□ -0.56
TDP2-201ENST00000341060 PSG1P11464 419 aa11.57□□□□□ -0.56
TDP2-201ENST00000341060 NUTF2P61970 127 aaKnown RBP11.57□□□□□ -0.56
TDP2-201ENST00000341060 GDF5OSQ5U4N7 250 aa11.57□□□□□ -0.56
TDP2-201ENST00000341060 SRSF8Q9BRL6 282 aaKnown RBP11.57□□□□□ -0.56
TDP2-201ENST00000341060 PRSS22Q9GZN4 317 aa11.57□□□□□ -0.56
TDP2-201ENST00000341060 ARHGAP32A7KAX9 2087 aa11.57□□□□□ -0.56
TDP2-201ENST00000341060 A0A1B0GXF2 115 aa11.57□□□□□ -0.56
TDP2-201ENST00000341060 DIRC3C9JPN6 131 aa11.57□□□□□ -0.56
TDP2-201ENST00000341060 OR2J3O76001 311 aa11.57□□□□□ -0.56
TDP2-201ENST00000341060 CT83Q5H943 113 aa11.57□□□□□ -0.56
TDP2-201ENST00000341060 MRPL52Q86TS9 123 aaKnown RBP11.57□□□□□ -0.56
TDP2-201ENST00000341060 NIT1Q86X76 327 aa11.57□□□□□ -0.56
TDP2-201ENST00000341060 OR4B1Q8NGF8 309 aa11.57□□□□□ -0.56
TDP2-201ENST00000341060 OR8B3Q8NGG8 313 aa11.57□□□□□ -0.56
TDP2-201ENST00000341060 OR8B2Q96RD0 313 aa11.57□□□□□ -0.56
TDP2-201ENST00000341060 MIEN1Q9BRT3 115 aa11.57□□□□□ -0.56
TDP2-201ENST00000341060 RPP21Q9H633 154 aaKnown RBP11.57□□□□□ -0.56
TDP2-201ENST00000341060 TMEM14CQ9P0S9 112 aa11.57□□□□□ -0.56
TDP2-201ENST00000341060 ABCA4P78363 2273 aa11.56□□□□□ -0.56
TDP2-201ENST00000341060 FAM90A27PA6NNH2 459 aa11.56□□□□□ -0.56
TDP2-201ENST00000341060 VWC2LB2RUY7 222 aa11.56□□□□□ -0.56
TDP2-201ENST00000341060 GRNP28799 593 aaKnown RBP11.56□□□□□ -0.56
TDP2-201ENST00000341060 LYZP61626 148 aa11.56□□□□□ -0.56
TDP2-201ENST00000341060 LY6DQ14210 128 aa11.56□□□□□ -0.56
TDP2-201ENST00000341060 PLGLAQ15195 96 aa11.56□□□□□ -0.56
TDP2-201ENST00000341060 LY6G5BQ8NDX9 201 aa11.56□□□□□ -0.56
TDP2-201ENST00000341060 RBM14Q96PK6 669 aaKnown RBP11.56□□□□□ -0.56
TDP2-201ENST00000341060 RASL11BQ9BPW5 248 aa11.56□□□□□ -0.56
TDP2-201ENST00000341060 SLC25A39Q9BZJ4 359 aaPredicted RBP11.56□□□□□ -0.56
TDP2-201ENST00000341060 ZNF492Q9P255 531 aa11.56□□□□□ -0.56
TDP2-201ENST00000341060 C19orf71A6NCJ1 209 aa11.56□□□□□ -0.56
TDP2-201ENST00000341060 LIPFP07098 398 aa11.56□□□□□ -0.56
TDP2-201ENST00000341060 KLF5Q13887 457 aaPredicted RBP11.56□□□□□ -0.56
TDP2-201ENST00000341060 LINC00322Q6ZN03 302 aaPredicted RBP11.56□□□□□ -0.56
TDP2-201ENST00000341060 PRORYQ9H606 182 aa11.56□□□□□ -0.56
TDP2-201ENST00000341060 ONECUT1Q9UBC0 465 aa11.56□□□□□ -0.56
TDP2-201ENST00000341060 H3BTX0 84 aa11.55□□□□□ -0.56
TDP2-201ENST00000341060 TIMM23O14925 209 aa11.55□□□□□ -0.56
TDP2-201ENST00000341060 LDLRAD2Q5SZI1 272 aa11.55□□□□□ -0.56
TDP2-201ENST00000341060 ZNF705AQ6ZN79 300 aaPredicted RBP11.55□□□□□ -0.56
TDP2-201ENST00000341060 WNT10AQ9GZT5 417 aa11.55□□□□□ -0.56
TDP2-201ENST00000341060 OTORQ9NRC9 128 aa11.55□□□□□ -0.56
TDP2-201ENST00000341060 A8MWL6 223 aa11.54□□□□□ -0.56
TDP2-201ENST00000341060 IGKV1-17P01599 117 aa11.54□□□□□ -0.56
TDP2-201ENST00000341060 P01737 135 aa11.54□□□□□ -0.56
TDP2-201ENST00000341060 FAM19A2Q8N3H0 131 aa11.54□□□□□ -0.56
TDP2-201ENST00000341060 ALKBH7Q9BT30 221 aaPredicted RBP11.54□□□□□ -0.56
TDP2-201ENST00000341060 SSBP4Q9BWG4 385 aaPredicted RBP11.54□□□□□ -0.56
TDP2-201ENST00000341060 COL6A6A6NMZ7 2263 aa11.54□□□□□ -0.56
TDP2-201ENST00000341060 C3orf79P0CE67 100 aa11.54□□□□□ -0.56
TDP2-201ENST00000341060 CAMPP49913 170 aa11.54□□□□□ -0.56
TDP2-201ENST00000341060 HBBP68871 147 aa11.54□□□□□ -0.56
TDP2-201ENST00000341060 KLRB1Q12918 225 aa11.54□□□□□ -0.56
TDP2-201ENST00000341060 MMDQ15546 238 aa11.54□□□□□ -0.56
TDP2-201ENST00000341060 Q86TA4 180 aa11.54□□□□□ -0.56
TDP2-201ENST00000341060 GFRA4Q9GZZ7 299 aa11.54□□□□□ -0.56
TDP2-201ENST00000341060 SOX21Q9Y651 276 aaPredicted RBP11.54□□□□□ -0.56
TDP2-201ENST00000341060 K7EIM0 57 aa11.53□□□□□ -0.56
TDP2-201ENST00000341060 M0QZK8 103 aa11.53□□□□□ -0.56
TDP2-201ENST00000341060 CNIH1O95406 144 aa11.53□□□□□ -0.56
TDP2-201ENST00000341060 HTR1DP28221 377 aa11.53□□□□□ -0.56
TDP2-201ENST00000341060 CTRLP40313 264 aa11.53□□□□□ -0.56
TDP2-201ENST00000341060 TCF24Q7RTU0 167 aa11.53□□□□□ -0.56
TDP2-201ENST00000341060 OR11H6Q8NGC7 330 aa11.53□□□□□ -0.56
TDP2-201ENST00000341060 GTSF1Q8WW33 167 aa11.53□□□□□ -0.56
TDP2-201ENST00000341060 NPIPB6E9PJ23 425 aa11.53□□□□□ -0.56
TDP2-201ENST00000341060 HOXB4P17483 251 aaPredicted RBP11.53□□□□□ -0.56
TDP2-201ENST00000341060 NTF3P20783 257 aa11.53□□□□□ -0.56
TDP2-201ENST00000341060 TMEM190Q8WZ59 177 aa11.53□□□□□ -0.56
TDP2-201ENST00000341060 BORCS7Q96B45 105 aa11.53□□□□□ -0.56
TDP2-201ENST00000341060 HRNRQ86YZ3 2850 aaPredicted RBP11.52□□□□□ -0.56
TDP2-201ENST00000341060 FAM231BA6NCW3 169 aa11.52□□□□□ -0.57
TDP2-201ENST00000341060 NBR2O15453 112 aa11.52□□□□□ -0.57
TDP2-201ENST00000341060 GPR6P46095 362 aaPredicted RBP11.52□□□□□ -0.57
TDP2-201ENST00000341060 OR2D3Q8NGH3 330 aa11.52□□□□□ -0.57
TDP2-201ENST00000341060 CFHR4Q92496 578 aa11.52□□□□□ -0.57
TDP2-201ENST00000341060 DPM3Q9P2X0 92 aa11.52□□□□□ -0.57
TDP2-201ENST00000341060 HSBP1O75506 76 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms