RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CENPWQ5EE01 88 aa10.27□□□□□ -0.76
LIN54-201ENST00000340417 BCL6BQ8N143 479 aaPredicted RBP10.27□□□□□ -0.76
LIN54-201ENST00000340417 MAP1LC3AQ9H492 121 aa10.27□□□□□ -0.76
LIN54-201ENST00000340417 ABCA1O95477 2261 aa10.27□□□□□ -0.76
LIN54-201ENST00000340417 CXCL2P19875 107 aa10.27□□□□□ -0.76
LIN54-201ENST00000340417 ZNF98A6NK75 572 aa10.27□□□□□ -0.77
LIN54-201ENST00000340417 FOXE3Q13461 319 aa10.27□□□□□ -0.77
LIN54-201ENST00000340417 IGKV1-5P01602 117 aa10.27□□□□□ -0.77
LIN54-201ENST00000340417 PTTG1IPP53801 180 aa10.27□□□□□ -0.77
LIN54-201ENST00000340417 GNG5P63218 68 aa10.27□□□□□ -0.77
LIN54-201ENST00000340417 IGFBPL1Q8WX77 278 aa10.27□□□□□ -0.77
LIN54-201ENST00000340417 TRBV20OR9-2A0A075B6H5 130 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 TSTD3H0UI37 97 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 C15orf65H3BRN8 121 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 H3BUA1 57 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 DAD1P61803 113 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 TMEM97Q5BJF2 176 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 ZNF705AQ6ZN79 300 aaPredicted RBP10.26□□□□□ -0.77
LIN54-201ENST00000340417 OR4C5Q8NGB2 326 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 XCL2Q9UBD3 114 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 MED13LQ71F56 2210 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 DOPEY2Q9Y3R5 2298 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 TNRC6AQ8NDV7 1962 aaKnown RBP10.26□□□□□ -0.77
LIN54-201ENST00000340417 TRAV12-3A0A0B4J271 114 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 IFITM3Q01628 133 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 TMEM183BQ1AE95 376 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 TMEM183AQ8IXX5 376 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 PRB4P10163 310 aaPredicted RBP10.26□□□□□ -0.77
LIN54-201ENST00000340417 SUPT4H1P63272 117 aaKnown RBP10.26□□□□□ -0.77
LIN54-201ENST00000340417 RCC1LQ96I51 464 aaKnown RBP10.26□□□□□ -0.77
LIN54-201ENST00000340417 AP5S1Q9NUS5 200 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 MUC21A0A0G2JKD1 596 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 MUC21A0A140T8X8 626 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 PMS2P11Q13670 270 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 TMEM86BQ8N661 226 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 SRRM4A7MD48 611 aaKnown RBP10.26□□□□□ -0.77
LIN54-201ENST00000340417 SCO1O75880 301 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 PRSS2P07478 247 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 BLCAPP62952 87 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 SRSF4Q08170 494 aaKnown RBP10.26□□□□□ -0.77
LIN54-201ENST00000340417 MALRD1Q5VYJ5 2156 aa10.26□□□□□ -0.77
LIN54-201ENST00000340417 ZNF324O75467 553 aaPredicted RBP10.25□□□□□ -0.77
LIN54-201ENST00000340417 IGHV3-53P01767 116 aa10.25□□□□□ -0.77
LIN54-201ENST00000340417 ID3Q02535 119 aa10.25□□□□□ -0.77
LIN54-201ENST00000340417 OR8A1Q8NGG7 326 aa10.25□□□□□ -0.77
LIN54-201ENST00000340417 NPIPB5A8MRT5 1133 aa10.25□□□□□ -0.77
LIN54-201ENST00000340417 NDUFA4O00483 81 aa10.25□□□□□ -0.77
LIN54-201ENST00000340417 LGALS1P09382 135 aaKnown RBP10.25□□□□□ -0.77
LIN54-201ENST00000340417 AWAT1Q58HT5 328 aa10.25□□□□□ -0.77
LIN54-201ENST00000340417 MRPL27Q9P0M9 148 aaKnown RBP10.25□□□□□ -0.77
LIN54-201ENST00000340417 GUSBP1Q15486 140 aa10.25□□□□□ -0.77
LIN54-201ENST00000340417 GEMIN7Q9H840 131 aaKnown RBP10.25□□□□□ -0.77
LIN54-201ENST00000340417 NRN1Q9NPD7 142 aa10.25□□□□□ -0.77
LIN54-201ENST00000340417 C10orf142B7Z368 130 aa10.25□□□□□ -0.77
LIN54-201ENST00000340417 RNASE2P10153 161 aaKnown RBP10.25□□□□□ -0.77
LIN54-201ENST00000340417 FAM24BQ8N5W8 94 aa10.25□□□□□ -0.77
LIN54-201ENST00000340417 SPG11Q96JI7 2443 aa10.24□□□□□ -0.77
LIN54-201ENST00000340417 IGKV2-40A0A087WW87 121 aaPredicted RBP10.24□□□□□ -0.77
LIN54-201ENST00000340417 IGKV2D-40P01614 121 aaPredicted RBP10.24□□□□□ -0.77
LIN54-201ENST00000340417 AMBPP02760 352 aa10.24□□□□□ -0.77
LIN54-201ENST00000340417 LHFPL1Q86WI0 220 aa10.24□□□□□ -0.77
LIN54-201ENST00000340417 C2CD4CQ8TF44 421 aa10.24□□□□□ -0.77
LIN54-201ENST00000340417 TRAV5A0A0B4J249 113 aa10.24□□□□□ -0.77
LIN54-201ENST00000340417 KLK15Q9H2R5 256 aa10.24□□□□□ -0.77
LIN54-201ENST00000340417 SMDT1Q9H4I9 107 aa10.24□□□□□ -0.77
LIN54-201ENST00000340417 F5H768 121 aa10.24□□□□□ -0.77
LIN54-201ENST00000340417 HOXD3P31249 432 aaPredicted RBP10.24□□□□□ -0.77
LIN54-201ENST00000340417 C19orf35Q6ZS72 473 aa10.24□□□□□ -0.77
LIN54-201ENST00000340417 PSG8Q9UQ74 426 aa10.24□□□□□ -0.77
LIN54-201ENST00000340417 IGKV1-6A0A0C4DH72 117 aa10.24□□□□□ -0.77
LIN54-201ENST00000340417 TREML4Q6UXN2 200 aa10.24□□□□□ -0.77
LIN54-201ENST00000340417 FER1L6-AS1Q8NA97 138 aa10.24□□□□□ -0.77
LIN54-201ENST00000340417 GP9P14770 177 aa10.24□□□□□ -0.77
LIN54-201ENST00000340417 TPSG1Q9NRR2 321 aa10.24□□□□□ -0.77
LIN54-201ENST00000340417 A0A087WX48 190 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 C8orf31Q8N9H6 132 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 PPP1R17O96001 155 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 OR4D5Q8NGN0 318 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 BBC3Q96PG8 261 aaPredicted RBP10.23□□□□□ -0.77
LIN54-201ENST00000340417 CHCHD5Q9BSY4 110 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 WDR83OSQ9Y284 106 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 SCGB1D4Q6XE38 83 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 REC114Q7Z4M0 266 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 LINC00477Q96M19 166 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 MAP1LC3CQ9BXW4 147 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 EPDR1Q9UM22 224 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 TMEM50AO95807 157 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 ZNF134P52741 427 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 SUMO2P61956 95 aaKnown RBP10.23□□□□□ -0.77
LIN54-201ENST00000340417 MALP21145 153 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 NMSQ5H8A3 153 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 PAPPA-AS1Q5QFB9 102 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 LRTM2Q8N967 370 aa10.23□□□□□ -0.77
LIN54-201ENST00000340417 FHITP49789 147 aa10.22□□□□□ -0.77
LIN54-201ENST00000340417 TP53BP1Q12888 1972 aaPredicted RBP10.22□□□□□ -0.77
LIN54-201ENST00000340417 SCO2A0A1W2PP80 73 aa10.22□□□□□ -0.77
LIN54-201ENST00000340417 IGLV3-1P01715 115 aa10.22□□□□□ -0.77
LIN54-201ENST00000340417 LMO4P61968 165 aa10.22□□□□□ -0.77
LIN54-201ENST00000340417 IGFL4Q6B9Z1 124 aa10.22□□□□□ -0.77
LIN54-201ENST00000340417 ZNF256Q9Y2P7 627 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms