RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 RITA1Q96K30 269 aa9.38□□□□□ -0.91
ZNF648-201ENST00000339948 FAM167A-AS1Q96KT0 104 aa9.38□□□□□ -0.91
ZNF648-201ENST00000339948 ATRXP46100 2492 aa9.38□□□□□ -0.91
ZNF648-201ENST00000339948 TRAV8-6A0A0B4J262 113 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 C2orf70A6NJV1 201 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 SMKR1H3BMG3 65 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 HLA-DRB1P01911 266 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 CRYABP02511 175 aaKnown RBP9.37□□□□□ -0.91
ZNF648-201ENST00000339948 WT1P19544 449 aaPredicted RBP9.37□□□□□ -0.91
ZNF648-201ENST00000339948 TMPRSS3P57727 454 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 RAB9BQ9NP90 201 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 AP5S1Q9NUS5 200 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 LY96Q9Y6Y9 160 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 M0R3E3 92 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 ARMS2P0C7Q2 107 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 FOXE3Q13461 319 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 RPUSD1Q9UJJ7 312 aaKnown RBP9.37□□□□□ -0.91
ZNF648-201ENST00000339948 ANKRD11Q6UB99 2663 aaPredicted RBP9.37□□□□□ -0.91
ZNF648-201ENST00000339948 IGHV3-23P01764 117 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 GPR183P32249 361 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 OCIAD2Q56VL3 154 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 IGFL4Q6B9Z1 124 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 SMIM15Q7Z3B0 74 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 GTSF1Q8WW33 167 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 DYNLRB1Q9NP97 96 aa9.37□□□□□ -0.91
ZNF648-201ENST00000339948 F2RL2O00254 374 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 NCR2O95944 276 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 HES1Q14469 280 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 TMEM249Q2WGJ8 235 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 BVES-AS1Q5T3Y7 98 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 C12orf54Q6X4T0 127 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 DDB2Q92466 427 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 MRPL27Q9P0M9 148 aaKnown RBP9.36□□□□□ -0.91
ZNF648-201ENST00000339948 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.36□□□□□ -0.91
ZNF648-201ENST00000339948 SPAARA0A1B0GVQ0 90 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 CFHR2P36980 270 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 KLF17Q5JT82 389 aaPredicted RBP9.36□□□□□ -0.91
ZNF648-201ENST00000339948 C17orf77Q96MU5 243 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 TCRBV4S1A1TA0A5B7 111 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 LYNX1G3V0Z9 82 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 LYNX1P0DP58 116 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 VMA21Q3ZAQ7 101 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 OR4F17Q8NGA8 305 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 ZNF714Q96N38 554 aa9.36□□□□□ -0.91
ZNF648-201ENST00000339948 IGHV2-70DA0A0C4DH43 119 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 TAX1BP3O14907 124 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 FAM106CPP0CH98 169 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 PPIFP30405 207 aaKnown RBP9.35□□□□□ -0.91
ZNF648-201ENST00000339948 CACNG7P62955 275 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 FAM106AQ4KMX7 169 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 C2orf83Q53S99 150 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 FXYD5Q96DB9 178 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 MRPL32Q9BYC8 188 aaKnown RBP9.35□□□□□ -0.91
ZNF648-201ENST00000339948 IGHV3OR16-13A0A075B7E8 117 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 IGHV3-74A0A0B4J1X5 117 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 J3QW42 95 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 TNFRSF1AP19438 455 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 GCSHP23434 173 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 GUSBP1Q15486 140 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 RBPMS2Q6ZRY4 209 aaKnown RBP9.35□□□□□ -0.91
ZNF648-201ENST00000339948 MTURNQ8N3F0 131 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 FBXL15Q9H469 300 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 A0A1W2PPI3 338 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 PRR33A8MZF0 331 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 H0YJW9 148 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 K7ERU9 68 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 ZNF207O43670 478 aaKnown RBP9.35□□□□□ -0.91
ZNF648-201ENST00000339948 IGHV1-46P01743 117 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 LIPFP07098 398 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 CT45A10P0DMU9 189 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 MRPL52Q86TS9 123 aaKnown RBP9.35□□□□□ -0.91
ZNF648-201ENST00000339948 GAFA1Q96PS6 74 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 TTTY13Q9BZ97 58 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 HSPB8Q9UJY1 196 aa9.35□□□□□ -0.91
ZNF648-201ENST00000339948 SPENQ96T58 3664 aaKnown RBP9.34□□□□□ -0.91
ZNF648-201ENST00000339948 FAM231BA6NCW3 169 aa9.34□□□□□ -0.91
ZNF648-201ENST00000339948 FAM90A9PA6NNJ1 464 aa9.34□□□□□ -0.91
ZNF648-201ENST00000339948 LYPD2Q6UXB3 125 aa9.34□□□□□ -0.91
ZNF648-201ENST00000339948 OR4C13Q8NGP0 309 aa9.34□□□□□ -0.91
ZNF648-201ENST00000339948 ZNF71Q9NQZ8 489 aaPredicted RBP9.34□□□□□ -0.91
ZNF648-201ENST00000339948 ANKHD1Q8IWZ3 2542 aaKnown RBP9.34□□□□□ -0.91
ZNF648-201ENST00000339948 TRAV30A0A087WSZ9 112 aa9.34□□□□□ -0.91
ZNF648-201ENST00000339948 J3KRW8 73 aa9.34□□□□□ -0.91
ZNF648-201ENST00000339948 IFI27P40305 119 aaPredicted RBP9.34□□□□□ -0.91
ZNF648-201ENST00000339948 RPL27AP46776 148 aaKnown RBP9.34□□□□□ -0.91
ZNF648-201ENST00000339948 C16orf54Q6UWD8 224 aa9.34□□□□□ -0.91
ZNF648-201ENST00000339948 C22orf34Q6ZV56 151 aa9.34□□□□□ -0.91
ZNF648-201ENST00000339948 DEFB104AQ8WTQ1 72 aa9.34□□□□□ -0.91
ZNF648-201ENST00000339948 URB1-AS1Q96HZ7 61 aa9.34□□□□□ -0.91
ZNF648-201ENST00000339948 CHODLQ9H9P2 273 aa9.34□□□□□ -0.91
ZNF648-201ENST00000339948 CGB1A6NKQ9 187 aa9.33□□□□□ -0.92
ZNF648-201ENST00000339948 NDUFB3O43676 98 aa9.33□□□□□ -0.92
ZNF648-201ENST00000339948 FCGR2BP31994 310 aaPredicted RBP9.33□□□□□ -0.92
ZNF648-201ENST00000339948 CSN1S1P47710 185 aa9.33□□□□□ -0.92
ZNF648-201ENST00000339948 MBD6Q96DN6 1003 aa9.33□□□□□ -0.92
ZNF648-201ENST00000339948 HIGD1AQ9Y241 93 aa9.33□□□□□ -0.92
ZNF648-201ENST00000339948 TCRAP04437 139 aa9.33□□□□□ -0.92
ZNF648-201ENST00000339948 AARDQ4LEZ3 155 aa9.33□□□□□ -0.92
ZNF648-201ENST00000339948 PNKDQ8N490 385 aa9.33□□□□□ -0.92
ZNF648-201ENST00000339948 RASL11BQ9BPW5 248 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms