RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 CCR6P51684 374 aa11.18□□□□□ -0.62
LINC01116-202ENST00000339037 EMP1P54849 157 aa11.18□□□□□ -0.62
LINC01116-202ENST00000339037 LGALS9BQ3B8N2 356 aa11.18□□□□□ -0.62
LINC01116-202ENST00000339037 DTD1Q8TEA8 209 aa11.18□□□□□ -0.62
LINC01116-202ENST00000339037 NPIPB3Q92617 1050 aa11.18□□□□□ -0.62
LINC01116-202ENST00000339037 NEU1Q99519 415 aa11.18□□□□□ -0.62
LINC01116-202ENST00000339037 MUC4Q99102 2169 aa11.18□□□□□ -0.62
LINC01116-202ENST00000339037 ZNF705FA8MVS1 300 aaPredicted RBP11.17□□□□□ -0.62
LINC01116-202ENST00000339037 TOMM40O96008 361 aa11.17□□□□□ -0.62
LINC01116-202ENST00000339037 IFNA21P01568 189 aa11.17□□□□□ -0.62
LINC01116-202ENST00000339037 ZNF705DP0CH99 300 aaPredicted RBP11.17□□□□□ -0.62
LINC01116-202ENST00000339037 ZNF705BP0CI00 300 aaPredicted RBP11.17□□□□□ -0.62
LINC01116-202ENST00000339037 NKX2-1P43699 371 aaPredicted RBP11.17□□□□□ -0.62
LINC01116-202ENST00000339037 ZNF79Q15937 498 aa11.17□□□□□ -0.62
LINC01116-202ENST00000339037 PYDC2Q56P42 97 aa11.17□□□□□ -0.62
LINC01116-202ENST00000339037 TMED4Q7Z7H5 227 aa11.17□□□□□ -0.62
LINC01116-202ENST00000339037 UBE2DNLQ8IWF7 75 aa11.17□□□□□ -0.62
LINC01116-202ENST00000339037 LGI3Q8N145 548 aa11.17□□□□□ -0.62
LINC01116-202ENST00000339037 CACFD1Q9UGQ2 172 aa11.17□□□□□ -0.62
LINC01116-202ENST00000339037 HSPG2P98160 4391 aa11.16□□□□□ -0.62
LINC01116-202ENST00000339037 IGHV3OR16-12A0A075B7B8 117 aa11.16□□□□□ -0.62
LINC01116-202ENST00000339037 SMIM9A6NGZ8 99 aa11.16□□□□□ -0.62
LINC01116-202ENST00000339037 IGKV3-20P01619 116 aa11.16□□□□□ -0.62
LINC01116-202ENST00000339037 PSG1P11464 419 aa11.16□□□□□ -0.62
LINC01116-202ENST00000339037 ANXA3P12429 323 aa11.16□□□□□ -0.62
LINC01116-202ENST00000339037 FAUP35544 74 aaKnown RBP11.16□□□□□ -0.62
LINC01116-202ENST00000339037 NUP62P37198 522 aaPredicted RBP11.16□□□□□ -0.62
LINC01116-202ENST00000339037 SRPXP78539 464 aa11.16□□□□□ -0.62
LINC01116-202ENST00000339037 NOXA1Q86UR1 476 aa11.16□□□□□ -0.62
LINC01116-202ENST00000339037 TOMM5Q8N4H5 51 aa11.16□□□□□ -0.62
LINC01116-202ENST00000339037 OR1S1Q8NH92 325 aa11.16□□□□□ -0.62
LINC01116-202ENST00000339037 FAM210BQ96KR6 192 aa11.16□□□□□ -0.62
LINC01116-202ENST00000339037 U3KQ87 197 aa11.16□□□□□ -0.62
LINC01116-202ENST00000339037 IGLV2-18A0A075B6J9 118 aa11.15□□□□□ -0.62
LINC01116-202ENST00000339037 TEX48A0A1B0GUV7 120 aa11.15□□□□□ -0.62
LINC01116-202ENST00000339037 GDF5OSQ5U4N7 250 aa11.15□□□□□ -0.62
LINC01116-202ENST00000339037 OR51G1Q8NGK1 321 aa11.15□□□□□ -0.62
LINC01116-202ENST00000339037 RNF125Q96EQ8 232 aa11.15□□□□□ -0.62
LINC01116-202ENST00000339037 PBDC1Q9BVG4 233 aa11.15□□□□□ -0.62
LINC01116-202ENST00000339037 RFNGQ9Y644 331 aa11.15□□□□□ -0.62
LINC01116-202ENST00000339037 CCDC160A6NGH7 325 aa11.14□□□□□ -0.63
LINC01116-202ENST00000339037 PITX3O75364 302 aa11.14□□□□□ -0.63
LINC01116-202ENST00000339037 FXYD7P58549 80 aa11.14□□□□□ -0.63
LINC01116-202ENST00000339037 AP3S2P59780 193 aa11.14□□□□□ -0.63
LINC01116-202ENST00000339037 DEFB1P60022 68 aa11.14□□□□□ -0.63
LINC01116-202ENST00000339037 TMEM128Q5BJH2 165 aa11.14□□□□□ -0.63
LINC01116-202ENST00000339037 SOHLH1Q5JUK2 328 aa11.14□□□□□ -0.63
LINC01116-202ENST00000339037 FOXI2Q6ZQN5 318 aa11.14□□□□□ -0.63
LINC01116-202ENST00000339037 LINC00052Q96N35 136 aa11.14□□□□□ -0.63
LINC01116-202ENST00000339037 SAV1Q9H4B6 383 aaPredicted RBP11.14□□□□□ -0.63
LINC01116-202ENST00000339037 DKK2Q9UBU2 259 aa11.14□□□□□ -0.63
LINC01116-202ENST00000339037 IGKV1D-37A0A075B6S9 117 aa11.13□□□□□ -0.63
LINC01116-202ENST00000339037 DUXBA0A1W2PPF3 345 aa11.13□□□□□ -0.63
LINC01116-202ENST00000339037 ID1P41134 155 aa11.13□□□□□ -0.63
LINC01116-202ENST00000339037 ZNF90Q03938 601 aa11.13□□□□□ -0.63
LINC01116-202ENST00000339037 GAMTQ14353 236 aa11.13□□□□□ -0.63
LINC01116-202ENST00000339037 FAM222AQ5U5X8 452 aa11.13□□□□□ -0.63
LINC01116-202ENST00000339037 OR8G2PQ6IF36 304 aa11.13□□□□□ -0.63
LINC01116-202ENST00000339037 Q6ZR54 194 aa11.13□□□□□ -0.63
LINC01116-202ENST00000339037 CCDC190Q86UF4 302 aa11.13□□□□□ -0.63
LINC01116-202ENST00000339037 ZNF709Q8N972 641 aa11.13□□□□□ -0.63
LINC01116-202ENST00000339037 COQ8AQ8NI60 647 aa11.13□□□□□ -0.63
LINC01116-202ENST00000339037 NIPSNAP3BQ9BS92 247 aa11.13□□□□□ -0.63
LINC01116-202ENST00000339037 WDR12Q9GZL7 423 aaKnown RBP11.13□□□□□ -0.63
LINC01116-202ENST00000339037 RBM38Q9H0Z9 239 aaKnown RBP11.13□□□□□ -0.63
LINC01116-202ENST00000339037 IAPPP10997 89 aa11.12□□□□□ -0.63
LINC01116-202ENST00000339037 HTN3P15516 51 aa11.12□□□□□ -0.63
LINC01116-202ENST00000339037 S100A5P33763 92 aa11.12□□□□□ -0.63
LINC01116-202ENST00000339037 PSMB3P49720 205 aa11.12□□□□□ -0.63
LINC01116-202ENST00000339037 PPP1R1AQ13522 171 aa11.12□□□□□ -0.63
LINC01116-202ENST00000339037 LRTM2Q8N967 370 aa11.12□□□□□ -0.63
LINC01116-202ENST00000339037 OR4B1Q8NGF8 309 aa11.12□□□□□ -0.63
LINC01116-202ENST00000339037 SLC35E1Q96K37 410 aa11.12□□□□□ -0.63
LINC01116-202ENST00000339037 CLUHP3Q96NS8 147 aa11.12□□□□□ -0.63
LINC01116-202ENST00000339037 ZFP92A6NM28 416 aa11.11□□□□□ -0.63
LINC01116-202ENST00000339037 GPX4P36969 197 aaPredicted RBP11.11□□□□□ -0.63
LINC01116-202ENST00000339037 ATP5IP56385 69 aaPredicted RBP11.11□□□□□ -0.63
LINC01116-202ENST00000339037 RNF212Q495C1 297 aa11.11□□□□□ -0.63
LINC01116-202ENST00000339037 SLC25A21Q9BQT8 299 aaPredicted RBP11.11□□□□□ -0.63
LINC01116-202ENST00000339037 SLC35B3Q9H1N7 401 aa11.11□□□□□ -0.63
LINC01116-202ENST00000339037 GOLT1BQ9Y3E0 138 aa11.11□□□□□ -0.63
LINC01116-202ENST00000339037 PIGBOS1A0A0B4J2F0 54 aa11.1□□□□□ -0.63
LINC01116-202ENST00000339037 LOC102723971A0A1B0GUV8 181 aa11.1□□□□□ -0.63
LINC01116-202ENST00000339037 SOCS3O14543 225 aa11.1□□□□□ -0.63
LINC01116-202ENST00000339037 SFT2D2O95562 160 aa11.1□□□□□ -0.63
LINC01116-202ENST00000339037 HBE1P02100 147 aa11.1□□□□□ -0.63
LINC01116-202ENST00000339037 C1orf194Q5T5A4 169 aa11.1□□□□□ -0.63
LINC01116-202ENST00000339037 SPATA31B1PQ5VZV4 182 aa11.1□□□□□ -0.63
LINC01116-202ENST00000339037 C7orf50Q9BRJ6 194 aaKnown RBP11.1□□□□□ -0.63
LINC01116-202ENST00000339037 MAGT1Q9H0U3 335 aa11.1□□□□□ -0.63
LINC01116-202ENST00000339037 YTHDF2Q9Y5A9 579 aaKnown RBP11.1□□□□□ -0.63
LINC01116-202ENST00000339037 IGKV1OR2-108A0A075B7D4 117 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 ISLRO14498 428 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 FABP1P07148 127 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 HOXB5P09067 269 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 SLC25A6P12236 298 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 LYZP61626 148 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 PSG9Q00887 426 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 OR2F1Q13607 317 aa11.09□□□□□ -0.63
LINC01116-202ENST00000339037 OXA1LQ15070 435 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms