RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 ATP5L2Q7Z4Y8 100 aa15.09■□□□□ 0.01
PSPC1-201ENST00000338910 OR2T6Q8NHC8 308 aa15.09■□□□□ 0.01
PSPC1-201ENST00000338910 MRPL32Q9BYC8 188 aaKnown RBP15.09■□□□□ 0.01
PSPC1-201ENST00000338910 TRAV5A0A0B4J249 113 aa15.09■□□□□ 0.01
PSPC1-201ENST00000338910 OR2T8A6NH00 312 aa15.09■□□□□ 0.01
PSPC1-201ENST00000338910 J3QR06 171 aa15.09■□□□□ 0.01
PSPC1-201ENST00000338910 NDUFB3O43676 98 aa15.09■□□□□ 0.01
PSPC1-201ENST00000338910 POU2AF1Q16633 256 aa15.09■□□□□ 0.01
PSPC1-201ENST00000338910 ZNF714Q96N38 554 aa15.09■□□□□ 0.01
PSPC1-201ENST00000338910 VPS25Q9BRG1 176 aa15.09■□□□□ 0.01
PSPC1-201ENST00000338910 SYS1-DBNDD2H3BUS1 97 aa15.08■□□□□ 0.01
PSPC1-201ENST00000338910 CT45A6P0DMU7 189 aa15.08■□□□□ 0.01
PSPC1-201ENST00000338910 CT45A5P0DMU8 189 aa15.08■□□□□ 0.01
PSPC1-201ENST00000338910 CT45A7P0DMV0 189 aa15.08■□□□□ 0.01
PSPC1-201ENST00000338910 PRCDQ00LT1 54 aa15.08■□□□□ 0.01
PSPC1-201ENST00000338910 MEF2CQ06413 473 aaPredicted RBP15.08■□□□□ 0.01
PSPC1-201ENST00000338910 SMIM15Q7Z3B0 74 aa15.08■□□□□ 0.01
PSPC1-201ENST00000338910 C7orf69Q9H7B7 122 aa15.08■□□□□ 0.01
PSPC1-201ENST00000338910 CTSZQ9UBR2 303 aa15.08■□□□□ 0.01
PSPC1-201ENST00000338910 hDV102S1A0JD36 115 aa15.08■□□□□ 0
PSPC1-201ENST00000338910 TNFRSF13BO14836 293 aaPredicted RBP15.08■□□□□ 0
PSPC1-201ENST00000338910 REG1BP48304 166 aa15.08■□□□□ 0
PSPC1-201ENST00000338910 MLANAQ16655 118 aa15.08■□□□□ 0
PSPC1-201ENST00000338910 CHRDL1Q9BU40 450 aa15.08■□□□□ 0
PSPC1-201ENST00000338910 PRNDQ9UKY0 176 aa15.08■□□□□ 0
PSPC1-201ENST00000338910 ZNF257Q9Y2Q1 563 aa15.08■□□□□ 0
PSPC1-201ENST00000338910 MUC21A0A0G2JKD1 596 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 MUC21A0A140T8X8 626 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 CBY3A6NI87 242 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 LYNX1G3V0Z9 82 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 PEX7O00628 323 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 IGKV1-16P04430 117 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 LYNX1P0DP58 116 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 MUC21Q5SSG8 566 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 FAM162BQ5T6X4 162 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 SLC25A34Q6PIV7 304 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 LINC00173Q6ZV60 143 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 ADTRPQ96IZ2 230 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 ACACBO00763 2458 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 HRNRQ86YZ3 2850 aaPredicted RBP15.07■□□□□ 0
PSPC1-201ENST00000338910 B9A039 149 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 CORTO00230 105 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 C2orf83Q53S99 150 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 ZNF329Q86UD4 541 aa15.07■□□□□ 0
PSPC1-201ENST00000338910 IGHV1-24A0A0C4DH33 117 aa15.06■□□□□ 0
PSPC1-201ENST00000338910 HIST1H1EP10412 219 aaKnown RBP15.06■□□□□ 0
PSPC1-201ENST00000338910 PRR27Q6MZM9 219 aa15.06■□□□□ 0
PSPC1-201ENST00000338910 C12orf54Q6X4T0 127 aa15.06■□□□□ 0
PSPC1-201ENST00000338910 AMMECR1LQ6DCA0 310 aa15.06■□□□□ 0
PSPC1-201ENST00000338910 TOX4O94842 621 aa15.05■□□□□ 0
PSPC1-201ENST00000338910 PYYP10082 97 aa15.05■□□□□ 0
PSPC1-201ENST00000338910 ATP5IP56385 69 aaPredicted RBP15.05■□□□□ 0
PSPC1-201ENST00000338910 TMEM30BQ3MIR4 351 aa15.05■□□□□ 0
PSPC1-201ENST00000338910 PRR31Q5SQ13 230 aa15.05■□□□□ 0
PSPC1-201ENST00000338910 ZNF841Q6ZN19 808 aa15.05■□□□□ 0
PSPC1-201ENST00000338910 CHCHD1Q96BP2 118 aaKnown RBP15.05■□□□□ 0
PSPC1-201ENST00000338910 CFAP46Q8IYW2 2715 aa15.05■□□□□ -0
PSPC1-201ENST00000338910 SRRM4A7MD48 611 aaKnown RBP15.05■□□□□ -0
PSPC1-201ENST00000338910 UPK2O00526 184 aa15.05■□□□□ -0
PSPC1-201ENST00000338910 CD69Q07108 199 aa15.05■□□□□ -0
PSPC1-201ENST00000338910 SCRT2Q9NQ03 307 aa15.05■□□□□ -0
PSPC1-201ENST00000338910 A6NJY4 79 aa15.04■□□□□ -0
PSPC1-201ENST00000338910 HLA-DRB1P01911 266 aa15.04■□□□□ -0
PSPC1-201ENST00000338910 RNASE2P10153 161 aaKnown RBP15.04■□□□□ -0
PSPC1-201ENST00000338910 HBBP68871 147 aa15.04■□□□□ -0
PSPC1-201ENST00000338910 LEPROTL1O95214 131 aa15.04■□□□□ -0
PSPC1-201ENST00000338910 LOXP28300 417 aaPredicted RBP15.04■□□□□ -0
PSPC1-201ENST00000338910 FOXA3P55318 350 aaPredicted RBP15.04■□□□□ -0
PSPC1-201ENST00000338910 OR1L8Q8NGR8 309 aa15.04■□□□□ -0
PSPC1-201ENST00000338910 TEX50A0A1B0GTY4 177 aa15.03■□□□□ -0
PSPC1-201ENST00000338910 PSG9Q00887 426 aa15.03■□□□□ -0
PSPC1-201ENST00000338910 PAXXQ9BUH6 204 aa15.03■□□□□ -0
PSPC1-201ENST00000338910 MRPL20Q9BYC9 149 aaKnown RBP15.03■□□□□ -0
PSPC1-201ENST00000338910 TMEM191AQ9H0A3 160 aa15.03■□□□□ -0
PSPC1-201ENST00000338910 CD5LO43866 347 aa15.03■□□□□ -0
PSPC1-201ENST00000338910 DIAPH2-AS1Q14236 149 aa15.02■□□□□ -0
PSPC1-201ENST00000338910 ZNF672Q499Z4 452 aaPredicted RBP15.02■□□□□ -0
PSPC1-201ENST00000338910 ZNF833PQ6ZTB9 187 aa15.02■□□□□ -0
PSPC1-201ENST00000338910 TCF24Q7RTU0 167 aa15.02■□□□□ -0
PSPC1-201ENST00000338910 CSTL1Q9H114 145 aa15.02■□□□□ -0
PSPC1-201ENST00000338910 KAAG1Q9UBP8 84 aa15.02■□□□□ -0
PSPC1-201ENST00000338910 CD24P25063 80 aa15.02□□□□□ -0.01
PSPC1-201ENST00000338910 OR10X1Q8NGY0 326 aa15.02□□□□□ -0.01
PSPC1-201ENST00000338910 MYCNOSP40205 109 aa15.01□□□□□ -0.01
PSPC1-201ENST00000338910 FAM71F2Q6NXP2 309 aa15.01□□□□□ -0.01
PSPC1-201ENST00000338910 CACNG8Q8WXS5 425 aa15.01□□□□□ -0.01
PSPC1-201ENST00000338910 IGSF10Q6WRI0 2623 aa15.01□□□□□ -0.01
PSPC1-201ENST00000338910 GAGE12BA1L429 117 aa15.01□□□□□ -0.01
PSPC1-201ENST00000338910 GNG5P63218 68 aa15.01□□□□□ -0.01
PSPC1-201ENST00000338910 FXYD5Q96DB9 178 aa15.01□□□□□ -0.01
PSPC1-201ENST00000338910 TACC2O95359 2948 aa15□□□□□ -0.01
PSPC1-201ENST00000338910 TRAV8-6A0A0B4J262 113 aa15□□□□□ -0.01
PSPC1-201ENST00000338910 HIST1H1AQ02539 215 aaPredicted RBP15□□□□□ -0.01
PSPC1-201ENST00000338910 PATE2Q6UY27 113 aa15□□□□□ -0.01
PSPC1-201ENST00000338910 OR10W1Q8NGF6 305 aa15□□□□□ -0.01
PSPC1-201ENST00000338910 MS4A6AQ9H2W1 248 aa15□□□□□ -0.01
PSPC1-201ENST00000338910 COX7A2P2O60397 106 aa15□□□□□ -0.01
PSPC1-201ENST00000338910 FSTL3O95633 263 aa15□□□□□ -0.01
PSPC1-201ENST00000338910 UQCRFS1P47985 274 aa15□□□□□ -0.01
PSPC1-201ENST00000338910 SSBP2P81877 361 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms