RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 DLX1P56177 255 aa17.13■□□□□ 0.33
PTDSS1-201ENST00000337004 GTSF1Q8WW33 167 aa17.13■□□□□ 0.33
PTDSS1-201ENST00000337004 TMEM14CQ9P0S9 112 aa17.13■□□□□ 0.33
PTDSS1-201ENST00000337004 CNOT1A5YKK6 2376 aaKnown RBP17.12■□□□□ 0.33
PTDSS1-201ENST00000337004 IGLC1P0CG04 106 aa17.12■□□□□ 0.33
PTDSS1-201ENST00000337004 LCN12Q6JVE5 192 aa17.12■□□□□ 0.33
PTDSS1-201ENST00000337004 EBLN2Q6P2I7 272 aa17.12■□□□□ 0.33
PTDSS1-201ENST00000337004 ATOH7Q8N100 152 aa17.12■□□□□ 0.33
PTDSS1-201ENST00000337004 RPEQ96AT9 228 aa17.12■□□□□ 0.33
PTDSS1-201ENST00000337004 PGLYRP4Q96LB8 373 aa17.12■□□□□ 0.33
PTDSS1-201ENST00000337004 GOLT1BQ9Y3E0 138 aa17.12■□□□□ 0.33
PTDSS1-201ENST00000337004 FAM231BA6NCW3 169 aa17.11■□□□□ 0.33
PTDSS1-201ENST00000337004 RBPMS2Q6ZRY4 209 aaKnown RBP17.11■□□□□ 0.33
PTDSS1-201ENST00000337004 SRSF12Q8WXF0 261 aaKnown RBP17.11■□□□□ 0.33
PTDSS1-201ENST00000337004 RASL11BQ9BPW5 248 aa17.11■□□□□ 0.33
PTDSS1-201ENST00000337004 SLC25A39Q9BZJ4 359 aaPredicted RBP17.11■□□□□ 0.33
PTDSS1-201ENST00000337004 FBXL15Q9H469 300 aa17.11■□□□□ 0.33
PTDSS1-201ENST00000337004 PRB3Q04118 309 aaPredicted RBP17.11■□□□□ 0.33
PTDSS1-201ENST00000337004 RP1L1Q8IWN7 2480 aaPredicted RBP17.11■□□□□ 0.33
PTDSS1-201ENST00000337004 CD3EP07766 207 aa17.1■□□□□ 0.33
PTDSS1-201ENST00000337004 RBPJQ06330 500 aa17.1■□□□□ 0.33
PTDSS1-201ENST00000337004 RNF5Q99942 180 aa17.1■□□□□ 0.33
PTDSS1-201ENST00000337004 TRAV9-2A0A087WT02 112 aa17.1■□□□□ 0.33
PTDSS1-201ENST00000337004 C20orf202A1L168 122 aa17.1■□□□□ 0.33
PTDSS1-201ENST00000337004 PLGLAQ15195 96 aa17.1■□□□□ 0.33
PTDSS1-201ENST00000337004 Q56UQ5 140 aa17.1■□□□□ 0.33
PTDSS1-201ENST00000337004 PPIAL4CA0A0B4J2A2 164 aa17.09■□□□□ 0.33
PTDSS1-201ENST00000337004 C2orf70A6NJV1 201 aa17.09■□□□□ 0.33
PTDSS1-201ENST00000337004 I3L2K1 104 aa17.09■□□□□ 0.33
PTDSS1-201ENST00000337004 PPIAL4GP0DN37 164 aa17.09■□□□□ 0.33
PTDSS1-201ENST00000337004 COX7A1P24310 79 aa17.09■□□□□ 0.33
PTDSS1-201ENST00000337004 COL8A1P27658 744 aa17.09■□□□□ 0.33
PTDSS1-201ENST00000337004 LAMTOR2Q9Y2Q5 125 aa17.09■□□□□ 0.33
PTDSS1-201ENST00000337004 RBP4P02753 201 aa17.09■□□□□ 0.33
PTDSS1-201ENST00000337004 Q86TA4 180 aa17.09■□□□□ 0.33
PTDSS1-201ENST00000337004 NAV3Q8IVL0 2385 aa17.08■□□□□ 0.33
PTDSS1-201ENST00000337004 NPIPB6E9PJ23 425 aa17.08■□□□□ 0.33
PTDSS1-201ENST00000337004 CHCHD1Q96BP2 118 aaKnown RBP17.08■□□□□ 0.33
PTDSS1-201ENST00000337004 SRSF8Q9BRL6 282 aaKnown RBP17.08■□□□□ 0.33
PTDSS1-201ENST00000337004 ARFGEF3Q5TH69 2177 aa17.08■□□□□ 0.33
PTDSS1-201ENST00000337004 FOXA3P55318 350 aaPredicted RBP17.08■□□□□ 0.32
PTDSS1-201ENST00000337004 TMEM190Q8WZ59 177 aa17.08■□□□□ 0.32
PTDSS1-201ENST00000337004 LYNX1G3V0Z9 82 aa17.07■□□□□ 0.32
PTDSS1-201ENST00000337004 LYNX1P0DP58 116 aa17.07■□□□□ 0.32
PTDSS1-201ENST00000337004 MAJINQ3KP22 176 aa17.07■□□□□ 0.32
PTDSS1-201ENST00000337004 URB1-AS1Q96HZ7 61 aa17.07■□□□□ 0.32
PTDSS1-201ENST00000337004 TMEM70Q9BUB7 260 aa17.07■□□□□ 0.32
PTDSS1-201ENST00000337004 RNF24Q9Y225 148 aa17.07■□□□□ 0.32
PTDSS1-201ENST00000337004 TRAV8-1A0A0A6YYK1 113 aa17.07■□□□□ 0.32
PTDSS1-201ENST00000337004 CHEK1O14757 476 aa17.07■□□□□ 0.32
PTDSS1-201ENST00000337004 TFPI2P48307 235 aa17.07■□□□□ 0.32
PTDSS1-201ENST00000337004 GOLT1AQ6ZVE7 132 aa17.07■□□□□ 0.32
PTDSS1-201ENST00000337004 PRNTQ86SH4 94 aa17.07■□□□□ 0.32
PTDSS1-201ENST00000337004 EXOC3-AS1Q8N2X6 119 aa17.07■□□□□ 0.32
PTDSS1-201ENST00000337004 ZFP30Q9Y2G7 519 aa17.07■□□□□ 0.32
PTDSS1-201ENST00000337004 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.06■□□□□ 0.32
PTDSS1-201ENST00000337004 CNIH1O95406 144 aa17.06■□□□□ 0.32
PTDSS1-201ENST00000337004 CIARTQ8N365 385 aaPredicted RBP17.06■□□□□ 0.32
PTDSS1-201ENST00000337004 SCNM1Q9BWG6 230 aa17.06■□□□□ 0.32
PTDSS1-201ENST00000337004 MRPS16Q9Y3D3 137 aaKnown RBP17.06■□□□□ 0.32
PTDSS1-201ENST00000337004 NPSP0C0P6 89 aa17.06■□□□□ 0.32
PTDSS1-201ENST00000337004 TSPOP30536 169 aa17.06■□□□□ 0.32
PTDSS1-201ENST00000337004 PRR31Q5SQ13 230 aa17.06■□□□□ 0.32
PTDSS1-201ENST00000337004 TRBV6-1A0A0K0K1D8 114 aa17.05■□□□□ 0.32
PTDSS1-201ENST00000337004 IGLV2-11P01706 119 aa17.05■□□□□ 0.32
PTDSS1-201ENST00000337004 TCF15Q12870 199 aa17.05■□□□□ 0.32
PTDSS1-201ENST00000337004 BPIFA4PQ86YQ2 179 aa17.05■□□□□ 0.32
PTDSS1-201ENST00000337004 NDFIP1Q9BT67 221 aa17.05■□□□□ 0.32
PTDSS1-201ENST00000337004 LY6LH3BQJ8 138 aa17.04■□□□□ 0.32
PTDSS1-201ENST00000337004 IGKV1-17P01599 117 aa17.04■□□□□ 0.32
PTDSS1-201ENST00000337004 ROS1P08922 2347 aa17.04■□□□□ 0.32
PTDSS1-201ENST00000337004 HAX1O00165 279 aa17.04■□□□□ 0.32
PTDSS1-201ENST00000337004 LINC00614P0C842 121 aa17.04■□□□□ 0.32
PTDSS1-201ENST00000337004 HOXB4P17483 251 aaPredicted RBP17.04■□□□□ 0.32
PTDSS1-201ENST00000337004 PRR30Q53SZ7 412 aaPredicted RBP17.04■□□□□ 0.32
PTDSS1-201ENST00000337004 STPG4Q8N801 248 aa17.04■□□□□ 0.32
PTDSS1-201ENST00000337004 OR4F17Q8NGA8 305 aa17.04■□□□□ 0.32
PTDSS1-201ENST00000337004 CLEC5AQ9NY25 188 aa17.04■□□□□ 0.32
PTDSS1-201ENST00000337004 LOC102724200A0A096LPH7 203 aaPredicted RBP17.03■□□□□ 0.32
PTDSS1-201ENST00000337004 TOX4O94842 621 aa17.03■□□□□ 0.32
PTDSS1-201ENST00000337004 CD24P25063 80 aa17.03■□□□□ 0.32
PTDSS1-201ENST00000337004 MUC15Q8N387 334 aa17.03■□□□□ 0.32
PTDSS1-201ENST00000337004 SHANK2-AS3Q9BTD1 123 aa17.03■□□□□ 0.32
PTDSS1-201ENST00000337004 SMG1Q96Q15 3661 aaKnown RBP17.03■□□□□ 0.32
PTDSS1-201ENST00000337004 TTC28Q96AY4 2481 aa17.03■□□□□ 0.32
PTDSS1-201ENST00000337004 TRBV19A0A075B6N1 114 aa17.03■□□□□ 0.32
PTDSS1-201ENST00000337004 KIR3DL3Q8N743 410 aa17.03■□□□□ 0.32
PTDSS1-201ENST00000337004 VKORC1Q9BQB6 163 aa17.03■□□□□ 0.32
PTDSS1-201ENST00000337004 LAMA5O15230 3695 aa17.03■□□□□ 0.32
PTDSS1-201ENST00000337004 CRXO43186 299 aaPredicted RBP17.02■□□□□ 0.32
PTDSS1-201ENST00000337004 IGLL1P15814 213 aa17.02■□□□□ 0.32
PTDSS1-201ENST00000337004 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.02■□□□□ 0.31
PTDSS1-201ENST00000337004 IGHV1-24A0A0C4DH33 117 aa17.02■□□□□ 0.31
PTDSS1-201ENST00000337004 K7EQM0 130 aa17.02■□□□□ 0.31
PTDSS1-201ENST00000337004 M0QZ24 198 aa17.02■□□□□ 0.31
PTDSS1-201ENST00000337004 LEPROTL1O95214 131 aa17.02■□□□□ 0.31
PTDSS1-201ENST00000337004 FAM120AOSQ5T036 256 aa17.02■□□□□ 0.31
PTDSS1-201ENST00000337004 C16orf54Q6UWD8 224 aa17.02■□□□□ 0.31
PTDSS1-201ENST00000337004 C1RLQ9NZP8 487 aa17.02■□□□□ 0.31
PTDSS1-201ENST00000337004 ONECUT1Q9UBC0 465 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms