RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 PUSL1Q8N0Z8 303 aaKnown RBP10.15□□□□□ -0.79
FN1-202ENST00000336916 FOXC2Q99958 501 aa10.15□□□□□ -0.79
FN1-202ENST00000336916 RAMP3O60896 148 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 MDS2Q8NDY4 140 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 IGHV3-49A0A0A0MS15 119 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 DMRT1Q9Y5R6 373 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 IGHV3-35A0A0C4DH35 117 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 BUB1B-PAK6H3BSN5 160 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 HOXA3O43365 443 aaPredicted RBP10.14□□□□□ -0.79
FN1-202ENST00000336916 NAPSAO96009 420 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 IGHV3-23P01764 117 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 RFNGQ9Y644 331 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 IGHV3-66A0A0C4DH42 116 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 ZNF525Q8N782 197 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 FLVCR1-AS1Q8TAF5 88 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 VWCEQ96DN2 955 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 F11RQ9Y624 299 aaKnown RBP10.14□□□□□ -0.79
FN1-202ENST00000336916 EFNB1P98172 346 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 TMEM200BQ69YZ2 307 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 LRP4O75096 1905 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 CRIPAKQ8N1N5 446 aa10.14□□□□□ -0.79
FN1-202ENST00000336916 GZMBP10144 247 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 SUPT4H1P63272 117 aaKnown RBP10.13□□□□□ -0.79
FN1-202ENST00000336916 TFF3Q07654 80 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 IGHV1-3A0A0C4DH29 117 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 Q6ZS49 121 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 RMI2Q96E14 147 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 GPHA2Q96T91 129 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 CHCHD5Q9BSY4 110 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 CD28P10747 220 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 NSUN5P1Q3KNT7 163 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 A0A1B0GWJ7 208 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 EFNB3Q15768 340 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 IGFL3Q6UXB1 125 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 TRAV9-2A0A087WT02 112 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 SNRPCP09234 159 aaKnown RBP10.13□□□□□ -0.79
FN1-202ENST00000336916 CEACAM8P31997 349 aaPredicted RBP10.13□□□□□ -0.79
FN1-202ENST00000336916 FAM90A2PQ658T7 463 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 KLHL30-AS1Q8NEE0 82 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 DAZ1Q9NQZ3 744 aaKnown RBP10.13□□□□□ -0.79
FN1-202ENST00000336916 CCL3L1P16619 93 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 IL17RELQ6ZVW7 336 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 WFDC6Q9BQY6 131 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 DNAJC30Q96LL9 226 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 RCHY1Q96PM5 261 aa10.13□□□□□ -0.79
FN1-202ENST00000336916 SLC25A39Q9BZJ4 359 aaPredicted RBP10.13□□□□□ -0.79
FN1-202ENST00000336916 TRAV1-1A0A0B4J248 108 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 IGHG3P01860 377 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 TSKUQ8WUA8 353 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 ZNF98A6NK75 572 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 C18orf15Q96N68 181 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 DMRTA2Q96SC8 542 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 PSG8Q9UQ74 426 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 VCYO14598 125 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 RHODO00212 210 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 IGHV3-11P01762 117 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.12□□□□□ -0.79
FN1-202ENST00000336916 PLEKHB2Q96CS7 222 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 MS4A6AQ9H2W1 248 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 JPT2Q9H910 190 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 BEX4Q9NWD9 120 aaPredicted RBP10.12□□□□□ -0.79
FN1-202ENST00000336916 COL5A1P20908 1838 aaPredicted RBP10.12□□□□□ -0.79
FN1-202ENST00000336916 TGFBR3LH3BV60 316 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 TOMM40O96008 361 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 LINC00614P0C842 121 aa10.12□□□□□ -0.79
FN1-202ENST00000336916 PARD6GQ9BYG4 376 aaPredicted RBP10.12□□□□□ -0.79
FN1-202ENST00000336916 MYO9AB2RTY4 2548 aa10.11□□□□□ -0.79
FN1-202ENST00000336916 CRYGSP22914 178 aa10.11□□□□□ -0.79
FN1-202ENST00000336916 SS18Q15532 418 aa10.11□□□□□ -0.79
FN1-202ENST00000336916 NCOR1P1Q9H4R4 102 aa10.11□□□□□ -0.79
FN1-202ENST00000336916 CST9LQ9H4G1 147 aa10.11□□□□□ -0.79
FN1-202ENST00000336916 J3QRE1 110 aa10.11□□□□□ -0.79
FN1-202ENST00000336916 NDUFA3O95167 84 aa10.11□□□□□ -0.79
FN1-202ENST00000336916 ERCC8Q13216 396 aa10.11□□□□□ -0.79
FN1-202ENST00000336916 GLRX5Q86SX6 157 aa10.11□□□□□ -0.79
FN1-202ENST00000336916 PIP4P2Q8N4L2 257 aa10.11□□□□□ -0.79
FN1-202ENST00000336916 ZFHX2Q9C0A1 2572 aaPredicted RBP10.11□□□□□ -0.79
FN1-202ENST00000336916 IGHV3OR16-13A0A075B7E8 117 aa10.11□□□□□ -0.79
FN1-202ENST00000336916 IGHV3-74A0A0B4J1X5 117 aa10.11□□□□□ -0.79
FN1-202ENST00000336916 FBLN7Q53RD9 439 aa10.11□□□□□ -0.79
FN1-202ENST00000336916 MIR17HGQ75NE6 70 aa10.1□□□□□ -0.79
FN1-202ENST00000336916 A0A1B0GV72 72 aa10.1□□□□□ -0.79
FN1-202ENST00000336916 MSMBP08118 114 aa10.1□□□□□ -0.79
FN1-202ENST00000336916 PGPEP1LA6NFU8 196 aa10.1□□□□□ -0.79
FN1-202ENST00000336916 TCF21O43680 179 aa10.1□□□□□ -0.79
FN1-202ENST00000336916 SRP19P09132 144 aaKnown RBP10.1□□□□□ -0.79
FN1-202ENST00000336916 LY96Q9Y6Y9 160 aa10.1□□□□□ -0.79
FN1-202ENST00000336916 F8WEM9 126 aa10.1□□□□□ -0.79
FN1-202ENST00000336916 HOXD3P31249 432 aaPredicted RBP10.1□□□□□ -0.79
FN1-202ENST00000336916 SLAQ13239 276 aa10.1□□□□□ -0.79
FN1-202ENST00000336916 ZMAT4Q9H898 229 aa10.1□□□□□ -0.79
FN1-202ENST00000336916 H3BUX3 64 aa10.1□□□□□ -0.79
FN1-202ENST00000336916 CHTOPQ9Y3Y2 248 aaKnown RBP10.1□□□□□ -0.79
FN1-202ENST00000336916 PAX2Q02962 417 aa10.09□□□□□ -0.79
FN1-202ENST00000336916 LGALS1P09382 135 aaKnown RBP10.09□□□□□ -0.79
FN1-202ENST00000336916 UBE2E1P51965 193 aa10.09□□□□□ -0.79
FN1-202ENST00000336916 C5orf30Q96GV9 206 aa10.09□□□□□ -0.79
FN1-202ENST00000336916 DEPPQ9NTK1 212 aa10.09□□□□□ -0.79
FN1-202ENST00000336916 IGKV1D-43A0A0B4J1Z2 117 aa10.09□□□□□ -0.79
FN1-202ENST00000336916 KIAA1644Q3SXP7 199 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms