RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 LILRA1O75019 489 aa10.76□□□□□ -0.69
HLCS-201ENST00000336648 C1orf43Q9BWL3 253 aa10.76□□□□□ -0.69
HLCS-201ENST00000336648 A0A0A6YYD4 124 aa10.76□□□□□ -0.69
HLCS-201ENST00000336648 IGHV1-8P0DP01 117 aa10.76□□□□□ -0.69
HLCS-201ENST00000336648 NDUFS6O75380 124 aaKnown RBP10.76□□□□□ -0.69
HLCS-201ENST00000336648 DMRTC2Q8IXT2 367 aaPredicted RBP10.76□□□□□ -0.69
HLCS-201ENST00000336648 RFNGQ9Y644 331 aa10.76□□□□□ -0.69
HLCS-201ENST00000336648 TUBGCP6Q96RT7 1819 aa10.76□□□□□ -0.69
HLCS-201ENST00000336648 FAM223BA6NKX1 122 aa10.75□□□□□ -0.69
HLCS-201ENST00000336648 FAM223AQ8IWN6 122 aa10.75□□□□□ -0.69
HLCS-201ENST00000336648 FLVCR1-AS1Q8TAF5 88 aa10.75□□□□□ -0.69
HLCS-201ENST00000336648 PPDPFLQ8WWR9 84 aa10.75□□□□□ -0.69
HLCS-201ENST00000336648 SEC16AO15027 2179 aa10.75□□□□□ -0.69
HLCS-201ENST00000336648 D6R8Y8 96 aa10.75□□□□□ -0.69
HLCS-201ENST00000336648 PPIFP30405 207 aaKnown RBP10.75□□□□□ -0.69
HLCS-201ENST00000336648 ARFGEF1Q9Y6D6 1849 aa10.75□□□□□ -0.69
HLCS-201ENST00000336648 Q6ZS49 121 aa10.75□□□□□ -0.69
HLCS-201ENST00000336648 LINC01551Q86U37 167 aa10.75□□□□□ -0.69
HLCS-201ENST00000336648 SNHG12Q9BXW3 62 aa10.75□□□□□ -0.69
HLCS-201ENST00000336648 TSSC4Q9Y5U2 329 aaPredicted RBP10.75□□□□□ -0.69
HLCS-201ENST00000336648 CXCL1P09341 107 aa10.75□□□□□ -0.69
HLCS-201ENST00000336648 C15orf32Q32M92 178 aa10.75□□□□□ -0.69
HLCS-201ENST00000336648 ZNF114Q8NC26 417 aa10.75□□□□□ -0.69
HLCS-201ENST00000336648 RBM3P98179 157 aaKnown RBP10.75□□□□□ -0.69
HLCS-201ENST00000336648 UBR3Q6ZT12 1888 aa10.75□□□□□ -0.69
HLCS-201ENST00000336648 IGHV1-3A0A0C4DH29 117 aa10.74□□□□□ -0.69
HLCS-201ENST00000336648 COLCA2A8K830 154 aa10.74□□□□□ -0.69
HLCS-201ENST00000336648 FOXF2Q12947 444 aa10.74□□□□□ -0.69
HLCS-201ENST00000336648 ZNF876PQ49A33 203 aa10.74□□□□□ -0.69
HLCS-201ENST00000336648 NMSQ5H8A3 153 aa10.74□□□□□ -0.69
HLCS-201ENST00000336648 NTN3O00634 580 aaPredicted RBP10.74□□□□□ -0.69
HLCS-201ENST00000336648 ZNF672Q499Z4 452 aaPredicted RBP10.74□□□□□ -0.69
HLCS-201ENST00000336648 NEGR1Q7Z3B1 354 aa10.74□□□□□ -0.69
HLCS-201ENST00000336648 GFRA4Q9GZZ7 299 aa10.74□□□□□ -0.69
HLCS-201ENST00000336648 SPRR3Q9UBC9 169 aa10.74□□□□□ -0.69
HLCS-201ENST00000336648 PMS2P5A8MQ11 134 aa10.74□□□□□ -0.69
HLCS-201ENST00000336648 VWCEQ96DN2 955 aa10.74□□□□□ -0.69
HLCS-201ENST00000336648 SELENOKQ9Y6D0 94 aa10.74□□□□□ -0.69
HLCS-201ENST00000336648 SYS1-DBNDD2H3BUS1 97 aa10.74□□□□□ -0.69
HLCS-201ENST00000336648 C5orf47Q569G3 176 aa10.74□□□□□ -0.69
HLCS-201ENST00000336648 TIMM21Q9BVV7 248 aa10.74□□□□□ -0.69
HLCS-201ENST00000336648 TRAV40A0A0B4J280 105 aa10.73□□□□□ -0.69
HLCS-201ENST00000336648 SCRT1Q9BWW7 348 aa10.73□□□□□ -0.69
HLCS-201ENST00000336648 ADAMTSL1Q8N6G6 1762 aa10.73□□□□□ -0.69
HLCS-201ENST00000336648 LYZL1Q6UWQ5 148 aa10.73□□□□□ -0.69
HLCS-201ENST00000336648 CYTL1Q9NRR1 136 aa10.73□□□□□ -0.69
HLCS-201ENST00000336648 B4DSR2 109 aa10.73□□□□□ -0.69
HLCS-201ENST00000336648 TMEM178BH3BS89 294 aa10.73□□□□□ -0.69
HLCS-201ENST00000336648 C6orf226Q5I0X4 101 aa10.73□□□□□ -0.69
HLCS-201ENST00000336648 NABP1Q96AH0 204 aa10.73□□□□□ -0.69
HLCS-201ENST00000336648 ATG2BQ96BY7 2078 aa10.73□□□□□ -0.69
HLCS-201ENST00000336648 TRIP12Q14669 1992 aaPredicted RBP10.73□□□□□ -0.69
HLCS-201ENST00000336648 C3orf79P0CE67 100 aa10.73□□□□□ -0.69
HLCS-201ENST00000336648 ZNF319Q9P2F9 582 aa10.73□□□□□ -0.69
HLCS-201ENST00000336648 IGKV1-12A0A0C4DH73 117 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 GAGE12JA6NER3 117 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 IGKV1D-12P01611 117 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 GAGE1Q13065 139 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 GAGE4Q13068 117 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 GAGE5Q13069 117 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 GAGE6Q13070 117 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 ERCC8Q13216 396 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 PDE6HQ13956 83 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 VSIRQ9H7M9 311 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 C5orf64Q2M2E5 130 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 TMEM200BQ69YZ2 307 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 RNF166Q96A37 237 aaPredicted RBP10.72□□□□□ -0.69
HLCS-201ENST00000336648 GFI1Q99684 422 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 IGKV2-40A0A087WW87 121 aaPredicted RBP10.72□□□□□ -0.69
HLCS-201ENST00000336648 IGKV2D-40P01614 121 aaPredicted RBP10.72□□□□□ -0.69
HLCS-201ENST00000336648 VMO1Q7Z5L0 202 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 IGKV1D-8A0A087WSZ0 117 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 FCN3O75636 299 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 CKAP5Q14008 2032 aa10.72□□□□□ -0.69
HLCS-201ENST00000336648 RP1P56715 2156 aa10.71□□□□□ -0.69
HLCS-201ENST00000336648 F8W1H4 67 aa10.71□□□□□ -0.69
HLCS-201ENST00000336648 UBE2DNLQ8IWF7 75 aa10.71□□□□□ -0.69
HLCS-201ENST00000336648 ANKRD36A6QL64 1941 aa10.71□□□□□ -0.69
HLCS-201ENST00000336648 SH2D1AO60880 128 aa10.71□□□□□ -0.69
HLCS-201ENST00000336648 TCF15Q12870 199 aa10.71□□□□□ -0.69
HLCS-201ENST00000336648 LSM4Q9Y4Z0 139 aaKnown RBP10.71□□□□□ -0.69
HLCS-201ENST00000336648 SUPT4H1P63272 117 aaKnown RBP10.71□□□□□ -0.69
HLCS-201ENST00000336648 LY6G5BQ8NDX9 201 aa10.71□□□□□ -0.69
HLCS-201ENST00000336648 TNS1Q9HBL0 1735 aaKnown RBP10.71□□□□□ -0.7
HLCS-201ENST00000336648 H0YJW9 148 aa10.71□□□□□ -0.7
HLCS-201ENST00000336648 GGNQ86UU5 652 aa10.71□□□□□ -0.7
HLCS-201ENST00000336648 SAP30O75446 220 aa10.71□□□□□ -0.7
HLCS-201ENST00000336648 COL5A3P25940 1745 aaPredicted RBP10.7□□□□□ -0.7
HLCS-201ENST00000336648 FAM231BA6NCW3 169 aa10.7□□□□□ -0.7
HLCS-201ENST00000336648 SRRM4A7MD48 611 aaKnown RBP10.7□□□□□ -0.7
HLCS-201ENST00000336648 HAMPP81172 84 aa10.7□□□□□ -0.7
HLCS-201ENST00000336648 GAS1P54826 345 aa10.7□□□□□ -0.7
HLCS-201ENST00000336648 PRIMA1Q86XR5 153 aa10.7□□□□□ -0.7
HLCS-201ENST00000336648 RPP25LQ8N5L8 163 aaKnown RBP10.7□□□□□ -0.7
HLCS-201ENST00000336648 ASXL3Q9C0F0 2248 aa10.7□□□□□ -0.7
HLCS-201ENST00000336648 ICE1Q9Y2F5 2266 aa10.7□□□□□ -0.7
HLCS-201ENST00000336648 RBBP6Q7Z6E9 1792 aaKnown RBP10.7□□□□□ -0.7
HLCS-201ENST00000336648 SS18Q15532 418 aa10.7□□□□□ -0.7
HLCS-201ENST00000336648 NUP35Q8NFH5 326 aa10.7□□□□□ -0.7
HLCS-201ENST00000336648 DOCK5Q9H7D0 1870 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms