RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 FAM231BA6NCW3 169 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 CD33P20138 364 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 RNF125Q96EQ8 232 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 SNHG12Q9BXW3 62 aa5.18□□□□□ -1.58
CSMD1-201ENST00000335551 ITGBL1O95965 494 aaPredicted RBP5.17□□□□□ -1.58
CSMD1-201ENST00000335551 NPC2P61916 151 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 OCC1Q8TAD7 63 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 ITLN2Q8WWU7 325 aaPredicted RBP5.17□□□□□ -1.58
CSMD1-201ENST00000335551 PRADC1Q9BSG0 188 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 C1orf210Q8IVY1 113 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 IGHV3-64A0A075B6Q5 118 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 MMP23AO75900 390 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 FAM214BQ7L5A3 538 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 PYY3Q5JQD4 70 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 INS-IGF2F8WCM5 200 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 INSP01308 110 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 FOXL2P58012 376 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 SPATA25Q9BR10 227 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 GFRA4Q9GZZ7 299 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 PLAC1Q9HBJ0 212 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 PEMTQ9UBM1 199 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 PTPRBP23467 1997 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 AHRRA9YTQ3 701 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 CCL1P22362 96 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 ERCC8Q13216 396 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 KLF14Q8TD94 323 aaPredicted RBP5.17□□□□□ -1.58
CSMD1-201ENST00000335551 RNF115Q9Y4L5 304 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 ZIC3O60481 467 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 DUSP14O95147 198 aaKnown RBP5.17□□□□□ -1.58
CSMD1-201ENST00000335551 EFNB3Q15768 340 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 ZNF664Q8N3J9 261 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 VCYO14598 125 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 ZNF826PQ6ZT77 177 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 PIN1P1O15428 100 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 ZFP36L2P47974 494 aaKnown RBP5.17□□□□□ -1.58
CSMD1-201ENST00000335551 ZAR1Q86SH2 424 aa5.17□□□□□ -1.58
CSMD1-201ENST00000335551 RPUSD1Q9UJJ7 312 aaKnown RBP5.16□□□□□ -1.58
CSMD1-201ENST00000335551 SETD2Q9BYW2 2564 aaPredicted RBP5.16□□□□□ -1.58
CSMD1-201ENST00000335551 ACANP16112 2415 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 IGKV1D-16P01601 117 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 C9orf50Q5SZB4 431 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 LEAP2Q969E1 77 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 SPSB2Q99619 263 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 FAM166AQ6J272 317 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 LINC01551Q86U37 167 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 DSCR8Q96T75 97 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 FBXL15Q9H469 300 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 KIAA1549LQ6ZVL6 1849 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 OVOL1O14753 267 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 DRD3P35462 400 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 CHCHD5Q9BSY4 110 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 PSG8Q9UQ74 426 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 TRIP6Q15654 476 aaKnown RBP5.16□□□□□ -1.58
CSMD1-201ENST00000335551 SHANK3Q9BYB0 1731 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 IGHV1-24A0A0C4DH33 117 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 NOTCH4Q99466 2003 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 IGHV3OR16-13A0A075B7E8 117 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 IGHV3-74A0A0B4J1X5 117 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 CCL21O00585 134 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 OR11H6Q8NGC7 330 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 FAM60AQ9NP50 221 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 GREM1O60565 184 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 C3orf79P0CE67 100 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 NUP35Q8NFH5 326 aa5.16□□□□□ -1.58
CSMD1-201ENST00000335551 FOXH1O75593 365 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 ZC2HC1BQ5TFG8 222 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 C19orf48Q6RUI8 117 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 PILRAQ9UKJ1 303 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 TRGV4A0A0C4DH28 118 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 C17orf98A8MV24 154 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 AMN1Q8IY45 258 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 FNDC1Q4ZHG4 1894 aaPredicted RBP5.15□□□□□ -1.58
CSMD1-201ENST00000335551 B9A039 149 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 BTCP35070 178 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 SIP14410 1827 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 A0A1W2PPM0 123 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 CISD3P0C7P0 127 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 C1orf53Q5VUE5 145 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 ANKRD29Q8N6D5 301 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 LY6G5BQ8NDX9 201 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 MBNL3Q9NUK0 354 aaKnown RBP5.15□□□□□ -1.58
CSMD1-201ENST00000335551 NLRC5Q86WI3 1866 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 LY6G6FQ5SQ64 297 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 C8orf46Q8TAG6 207 aa5.15□□□□□ -1.58
CSMD1-201ENST00000335551 SLAQ13239 276 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 LCN12Q6JVE5 192 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 SS18L2Q9UHA2 77 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 IGHV3-49A0A0A0MS15 119 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 IGHV3-66A0A0C4DH42 116 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 RNF126Q9BV68 326 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 ZNF106Q9H2Y7 1883 aaKnown RBP5.15□□□□□ -1.59
CSMD1-201ENST00000335551 C12orf77C9JDV5 145 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 IGHG3P01860 377 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 GLRXP35754 106 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 DMRTC2Q8IXT2 367 aaPredicted RBP5.15□□□□□ -1.59
CSMD1-201ENST00000335551 ZNF625Q96I27 306 aaPredicted RBP5.15□□□□□ -1.59
CSMD1-201ENST00000335551 AMELYQ99218 206 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 DTX4Q9Y2E6 619 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 LINC00312Q9Y6C7 94 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 A0A1B0GWJ7 208 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms