RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 NBASA2RRP1 2371 aa9.36□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 LAMA5O15230 3695 aa9.36□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 TCRAP04437 139 aa9.36□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 C3orf79P0CE67 100 aa9.36□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 ZNF25P17030 456 aaPredicted RBP9.36□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 SPACA3Q8IXA5 215 aa9.36□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 PRSS33Q8NF86 280 aa9.36□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 PGLYRP4Q96LB8 373 aa9.36□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 RBM14Q96PK6 669 aaKnown RBP9.36□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 VKORC1Q9BQB6 163 aa9.36□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 CRYGCP07315 174 aa9.36□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 S100A7AQ86SG5 101 aa9.36□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 TLN1Q9Y490 2541 aaKnown RBP9.36□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 HNRNPA3P51991 378 aaKnown RBP9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 Q6ZN92 141 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 PRNTQ86SH4 94 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 TOMM40O96008 361 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 IGLV1-47P01700 117 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 LIPFP07098 398 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 GOLT1AQ6ZVE7 132 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 SCNM1Q9BWG6 230 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 UQCR10Q9UDW1 63 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 RNF24Q9Y225 148 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 HILPDAQ9Y5L2 63 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 MUC6Q6W4X9 2439 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 ANKHD1Q8IWZ3 2542 aaKnown RBP9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 CEP295Q9C0D2 2601 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 HTR1DP28221 377 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 PMCHL1Q16048 86 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 Q56UQ5 140 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 BPIFA4PQ86YQ2 179 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 MBD6Q96DN6 1003 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 ADGRG4Q8IZF6 3080 aa9.35□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 CEACAM3P40198 252 aa9.34□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 MRPL52Q86TS9 123 aaKnown RBP9.34□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 ATOH7Q8N100 152 aa9.34□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 SLC25A39Q9BZJ4 359 aaPredicted RBP9.34□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 OTORQ9NRC9 128 aa9.34□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 SOX21Q9Y651 276 aaPredicted RBP9.34□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 FOXA3P55318 350 aaPredicted RBP9.34□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 C11orf42Q8N5U0 333 aa9.34□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 SPENQ96T58 3664 aaKnown RBP9.34□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 TIMM23O14925 209 aa9.34□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 GP9P14770 177 aa9.34□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 ARF6P62330 175 aa9.34□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 RBPMS2Q6ZRY4 209 aaKnown RBP9.34□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 RAB1BQ9H0U4 201 aa9.34□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 KLF12Q9Y4X4 402 aa9.34□□□□□ -0.91
CSPG4P4Y-201ENST00000333235 MYCNOSP40205 109 aa9.33□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 RNF5Q99942 180 aa9.33□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 TIMM8BQ9Y5J9 83 aaPredicted RBP9.33□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 AKAP13Q12802 2813 aa9.33□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 TRAV8-1A0A0A6YYK1 113 aa9.33□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 IGLC1P0CG04 106 aa9.33□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 ZNF672Q499Z4 452 aaPredicted RBP9.33□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 ALKBH7Q9BT30 221 aaPredicted RBP9.33□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 TPPP3Q9BW30 176 aa9.33□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 C20orf202A1L168 122 aa9.33□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 BTF3P20290 206 aaKnown RBP9.33□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 COL5A1-AS1Q5SY13 56 aa9.33□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 RUSC1-AS1Q66K80 236 aa9.33□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 EXOC3-AS1Q8N2X6 119 aa9.33□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 DPM3Q9P2X0 92 aa9.33□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 A0A1W2PRD5 423 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 A0A1W2PRF3 423 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 A0A1W2PRM7 423 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 GNG7O60262 68 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 FSTL3O95633 263 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 CT45A10P0DMU9 189 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 PLP1P60201 277 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 CT83Q5H943 113 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 PRR31Q5SQ13 230 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 NIT1Q86X76 327 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 RNF114Q9Y508 228 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 CCL21O00585 134 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 LTAP01374 205 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 IL4P05112 153 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 FAM181BA6NEQ2 426 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 TEX22C9J3V5 150 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 LCN12Q6JVE5 192 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 ZNF492Q9P255 531 aa9.32□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 SCGB2A1O75556 95 aa9.31□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 OR2J3O76001 311 aa9.31□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 CRYGBP07316 175 aa9.31□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 GDF5OSQ5U4N7 250 aa9.31□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 CIARTQ8N365 385 aaPredicted RBP9.31□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 AAMDCQ9H7C9 122 aa9.31□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 NCBP2LA6PVI3 153 aaKnown RBP9.31□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 NBR2O15453 112 aa9.31□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 CSN1S1P47710 185 aa9.31□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 MRGPRG-AS1Q2M3A8 158 aa9.31□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 ZNF841Q6ZN19 808 aa9.31□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 MLST8Q9BVC4 326 aa9.31□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.31□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 FCGR2BP31994 310 aaPredicted RBP9.31□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 Q86TA4 180 aa9.31□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 HSBP1L1C9JCN9 74 aa9.3□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 K7ENP7 123 aa9.3□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 CD24P25063 80 aa9.3□□□□□ -0.92
CSPG4P4Y-201ENST00000333235 KLF5Q13887 457 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms