RNA–Protein interactions for RNA: ENST00000331194.8

CCDC88C-201, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 5 BASIC

Gene CCDC88C, Length 3,104 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-201ENST00000331194 APOHP02749 345 aaPredicted RBP10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 ORM2P19652 201 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 CD69Q07108 199 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 LINC01545Q5VT33 79 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 OR2Z1Q8NG97 314 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 OR10AG1Q8NH19 301 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 ITLN1Q8WWA0 313 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 B4GALT7Q9UBV7 327 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 SMPXQ9UHP9 88 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 EPDR1Q9UM22 224 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 ZNF257Q9Y2Q1 563 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 TPRP12270 2363 aaKnown RBP10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 CKS1BP61024 79 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 RTL8BQ17RB0 113 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 C10orf55Q5SWW7 151 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 GTF2H5Q6ZYL4 71 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 OR2K2Q8NGT1 345 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 ZNF48Q96MX3 618 aaPredicted RBP10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 MS4A6AQ9H2W1 248 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 MGST3O14880 152 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 FGF6P10767 208 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 LINC00305Q7Z4B0 112 aa10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 CIARTQ8N365 385 aaPredicted RBP10.84□□□□□ -0.67
CCDC88C-201ENST00000331194 LOC389332A0A1B0GUA5 103 aa10.83□□□□□ -0.68
CCDC88C-201ENST00000331194 K7EP34 96 aa10.83□□□□□ -0.68
CCDC88C-201ENST00000331194 C17orf58Q2M2W7 97 aa10.83□□□□□ -0.68
CCDC88C-201ENST00000331194 SIGMAR1Q99720 223 aa10.83□□□□□ -0.68
CCDC88C-201ENST00000331194 PLCE1Q9P212 2302 aa10.83□□□□□ -0.68
CCDC88C-201ENST00000331194 SPTA1P02549 2419 aa10.83□□□□□ -0.68
CCDC88C-201ENST00000331194 IGHV3-21A0A0B4J1V1 117 aa10.83□□□□□ -0.68
CCDC88C-201ENST00000331194 UPK2O00526 184 aa10.83□□□□□ -0.68
CCDC88C-201ENST00000331194 ZNF747Q9BV97 191 aa10.83□□□□□ -0.68
CCDC88C-201ENST00000331194 F11RQ9Y624 299 aaKnown RBP10.83□□□□□ -0.68
CCDC88C-201ENST00000331194 ANKRD11Q6UB99 2663 aaPredicted RBP10.83□□□□□ -0.68
CCDC88C-201ENST00000331194 A8MWL6 223 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 K7EMI3 77 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 RNFT1Q5M7Z0 435 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 ABHD17BQ5VST6 288 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 NEGR1Q7Z3B1 354 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 FLYWCH2Q96CP2 140 aaKnown RBP10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 GPR82Q96P67 336 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 HSPB8Q9UJY1 196 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 APC2O95996 2303 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 FSTL3O95633 263 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 SAA1P0DJI8 122 aaPredicted RBP10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 APELAP0DMC3 54 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 SEC11AP67812 179 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 MLST8Q9BVC4 326 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 TPPP3Q9BW30 176 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 PRSS22Q9GZN4 317 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 A0A1W2PNU3 283 aaPredicted RBP10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 ZNF788Q6ZQV5 615 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 PDPNQ86YL7 162 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 C19orf24Q9BVV8 132 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 MRPL32Q9BYC8 188 aaKnown RBP10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 PRNDQ9UKY0 176 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 SPCS1Q9Y6A9 102 aa10.82□□□□□ -0.68
CCDC88C-201ENST00000331194 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 H3BRM9 83 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 F2RL2O00254 374 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 KIR2DS2P43631 304 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 C2orf83Q53S99 150 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 RBPMS2Q6ZRY4 209 aaKnown RBP10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 WFDC3Q8IUB2 231 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 PCP2Q8IVA1 136 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 DEFB108BQ8NET1 73 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 NDFIP1Q9BT67 221 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 NPFFR1Q9GZQ6 430 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 CHD8Q9HCK8 2581 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 TEX48A0A1B0GUV7 120 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 CT45A6P0DMU7 189 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 CT45A5P0DMU8 189 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 CT45A7P0DMV0 189 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 MYCNOSP40205 109 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 FAM162BQ5T6X4 162 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 ATP1A1-AS1Q5TC04 95 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 DAZAP1Q96EP5 407 aaKnown RBP10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 AP5S1Q9NUS5 200 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 DSCAML1Q8TD84 2053 aa10.81□□□□□ -0.68
CCDC88C-201ENST00000331194 IGKV1D-37A0A075B6S9 117 aa10.8□□□□□ -0.68
CCDC88C-201ENST00000331194 CDX4O14627 284 aaPredicted RBP10.8□□□□□ -0.68
CCDC88C-201ENST00000331194 ARMS2P0C7Q2 107 aa10.8□□□□□ -0.68
CCDC88C-201ENST00000331194 FAM87AP0C7U9 286 aa10.8□□□□□ -0.68
CCDC88C-201ENST00000331194 GCSAMQ8N6F7 178 aa10.8□□□□□ -0.68
CCDC88C-201ENST00000331194 SPRR3Q9UBC9 169 aa10.8□□□□□ -0.68
CCDC88C-201ENST00000331194 C19orf71A6NCJ1 209 aa10.8□□□□□ -0.68
CCDC88C-201ENST00000331194 IFI27P40305 119 aaPredicted RBP10.8□□□□□ -0.68
CCDC88C-201ENST00000331194 MEOX1P50221 254 aa10.8□□□□□ -0.68
CCDC88C-201ENST00000331194 MSMPQ1L6U9 139 aa10.8□□□□□ -0.68
CCDC88C-201ENST00000331194 RBMXL3Q8N7X1 1067 aaKnown RBP10.8□□□□□ -0.68
CCDC88C-201ENST00000331194 TTTY13Q9BZ97 58 aa10.8□□□□□ -0.68
CCDC88C-201ENST00000331194 JKAMPQ9P055 326 aa10.8□□□□□ -0.68
CCDC88C-201ENST00000331194 PEAR1Q5VY43 1037 aaPredicted RBP10.8□□□□□ -0.68
CCDC88C-201ENST00000331194 PRSS3P2Q8NHM4 247 aa10.8□□□□□ -0.68
CCDC88C-201ENST00000331194 IGF2RP11717 2491 aa10.79□□□□□ -0.68
CCDC88C-201ENST00000331194 COL8A1P27658 744 aa10.79□□□□□ -0.68
CCDC88C-201ENST00000331194 CFHR2P36980 270 aa10.79□□□□□ -0.68
CCDC88C-201ENST00000331194 CNEP1R1Q8N9A8 125 aa10.79□□□□□ -0.68
CCDC88C-201ENST00000331194 INSIG2Q9Y5U4 225 aa10.79□□□□□ -0.68
CCDC88C-201ENST00000331194 NTN3O00634 580 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms