RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 TXN2Q99757 166 aa13.24□□□□□ -0.29
DDX41-201ENST00000330503 TMEM14CQ9P0S9 112 aa13.24□□□□□ -0.29
DDX41-201ENST00000330503 LY96Q9Y6Y9 160 aa13.24□□□□□ -0.29
DDX41-201ENST00000330503 TENM4Q6N022 2769 aa13.24□□□□□ -0.29
DDX41-201ENST00000330503 H3BRN7 92 aa13.23□□□□□ -0.29
DDX41-201ENST00000330503 TGFAP01135 160 aa13.23□□□□□ -0.29
DDX41-201ENST00000330503 CD99P14209 185 aa13.23□□□□□ -0.29
DDX41-201ENST00000330503 RPS10P46783 165 aaKnown RBP13.23□□□□□ -0.29
DDX41-201ENST00000330503 RHOGP84095 191 aa13.23□□□□□ -0.29
DDX41-201ENST00000330503 ZNF502Q8TBZ5 544 aa13.23□□□□□ -0.29
DDX41-201ENST00000330503 CHRDL1Q9BU40 450 aa13.23□□□□□ -0.29
DDX41-201ENST00000330503 ABCA12Q86UK0 2595 aa13.23□□□□□ -0.29
DDX41-201ENST00000330503 TRBV24-1A0A075B6N3 115 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 J3QLI3 93 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 ADMP35318 185 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 GALR1P47211 349 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 CRIP2P52943 208 aaPredicted RBP13.22□□□□□ -0.29
DDX41-201ENST00000330503 USF2Q15853 346 aaPredicted RBP13.22□□□□□ -0.29
DDX41-201ENST00000330503 C15orf32Q32M92 178 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 C1QL4Q86Z23 238 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 SFRP2Q96HF1 295 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 FAM210BQ96KR6 192 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 LINC00479Q96M42 142 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 PYGO2Q9BRQ0 406 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 H3BTX0 84 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 IGHV4-31P0DP07 118 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 RAB5BP61020 215 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 CENPWQ5EE01 88 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 Q5PR19 223 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 ZNF586Q9NXT0 402 aa13.22□□□□□ -0.29
DDX41-201ENST00000330503 MDFIC2A0A1B0GVS7 189 aa13.21□□□□□ -0.29
DDX41-201ENST00000330503 GNG4P50150 75 aa13.21□□□□□ -0.29
DDX41-201ENST00000330503 HIST2H2BCQ6DN03 193 aa13.21□□□□□ -0.29
DDX41-201ENST00000330503 TEX38Q6PEX7 206 aa13.21□□□□□ -0.29
DDX41-201ENST00000330503 IGF2BP2-AS1Q96M15 143 aa13.21□□□□□ -0.29
DDX41-201ENST00000330503 MS4A10Q96PG2 267 aa13.21□□□□□ -0.29
DDX41-201ENST00000330503 LINC00527Q9UJ94 153 aa13.21□□□□□ -0.29
DDX41-201ENST00000330503 TRAV41A0A0B4J266 112 aa13.21□□□□□ -0.3
DDX41-201ENST00000330503 PGPA6NDG6 321 aa13.21□□□□□ -0.3
DDX41-201ENST00000330503 IGLV2-8P01709 118 aa13.21□□□□□ -0.3
DDX41-201ENST00000330503 HIST1H1EP10412 219 aaKnown RBP13.21□□□□□ -0.3
DDX41-201ENST00000330503 KRTAP1-3Q8IUG1 177 aa13.21□□□□□ -0.3
DDX41-201ENST00000330503 EPDR1Q9UM22 224 aa13.21□□□□□ -0.3
DDX41-201ENST00000330503 CR1P17927 2039 aa13.2□□□□□ -0.3
DDX41-201ENST00000330503 J3QKU1 62 aa13.2□□□□□ -0.3
DDX41-201ENST00000330503 PEX7O00628 323 aa13.2□□□□□ -0.3
DDX41-201ENST00000330503 GNG5P63218 68 aa13.2□□□□□ -0.3
DDX41-201ENST00000330503 C9orf152Q5JTZ5 239 aa13.2□□□□□ -0.3
DDX41-201ENST00000330503 OR5B12Q96R08 314 aa13.2□□□□□ -0.3
DDX41-201ENST00000330503 NAV2Q8IVL1 2488 aa13.2□□□□□ -0.3
DDX41-201ENST00000330503 ZNF98A6NK75 572 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 PPP1R2P9O14990 202 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 MRPS12O15235 138 aaKnown RBP13.19□□□□□ -0.3
DDX41-201ENST00000330503 OR5I1Q13606 314 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 PSMG3-AS1Q96PY0 264 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 NBPF19A0A087WUL8 3843 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 APCP25054 2843 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 IGHG2P01859 326 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 CLEC3BP05452 202 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 SRP14P37108 136 aaKnown RBP13.19□□□□□ -0.3
DDX41-201ENST00000330503 TAS2R60P59551 318 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 BLCAPP62952 87 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 DEFB112Q30KQ8 113 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 Q6ZS46 218 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 OR10G8Q8NGN5 311 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 MBD6Q96DN6 1003 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 CCDC140Q96MF4 163 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 Q9H3A6 140 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 CDC42EP3Q9UKI2 254 aa13.19□□□□□ -0.3
DDX41-201ENST00000330503 CSPG4Q6UVK1 2322 aa13.18□□□□□ -0.3
DDX41-201ENST00000330503 TRAV34A0A0B4J273 112 aa13.18□□□□□ -0.3
DDX41-201ENST00000330503 IGF1P05019 195 aa13.18□□□□□ -0.3
DDX41-201ENST00000330503 SLC25A5P05141 298 aaKnown RBP13.18□□□□□ -0.3
DDX41-201ENST00000330503 GPR183P32249 361 aa13.18□□□□□ -0.3
DDX41-201ENST00000330503 C17orf77Q96MU5 243 aa13.18□□□□□ -0.3
DDX41-201ENST00000330503 TCEAL7Q9BRU2 100 aa13.18□□□□□ -0.3
DDX41-201ENST00000330503 GGCTO75223 188 aaKnown RBP13.18□□□□□ -0.3
DDX41-201ENST00000330503 IGLC2P0DOY2 106 aa13.18□□□□□ -0.3
DDX41-201ENST00000330503 S100PP25815 95 aa13.18□□□□□ -0.3
DDX41-201ENST00000330503 FAM3BP58499 235 aaPredicted RBP13.18□□□□□ -0.3
DDX41-201ENST00000330503 BPIFA4PQ86YQ2 179 aa13.18□□□□□ -0.3
DDX41-201ENST00000330503 Q96MF0 132 aa13.18□□□□□ -0.3
DDX41-201ENST00000330503 FSHBP01225 129 aa13.17□□□□□ -0.3
DDX41-201ENST00000330503 GCGP01275 180 aa13.17□□□□□ -0.3
DDX41-201ENST00000330503 CNN1P51911 297 aaKnown RBP13.17□□□□□ -0.3
DDX41-201ENST00000330503 SAV1Q9H4B6 383 aaPredicted RBP13.17□□□□□ -0.3
DDX41-201ENST00000330503 BIN3Q9NQY0 253 aa13.17□□□□□ -0.3
DDX41-201ENST00000330503 PITPNC1Q9UKF7 332 aa13.17□□□□□ -0.3
DDX41-201ENST00000330503 KLF12Q9Y4X4 402 aa13.17□□□□□ -0.3
DDX41-201ENST00000330503 ZANQ9Y493 2812 aa13.17□□□□□ -0.3
DDX41-201ENST00000330503 M0QZK8 103 aa13.16□□□□□ -0.3
DDX41-201ENST00000330503 ISLRO14498 428 aa13.16□□□□□ -0.3
DDX41-201ENST00000330503 CLEC19AQ6UXS0 136 aa13.16□□□□□ -0.3
DDX41-201ENST00000330503 IMMP2LQ96T52 175 aa13.16□□□□□ -0.3
DDX41-201ENST00000330503 OTORQ9NRC9 128 aa13.16□□□□□ -0.3
DDX41-201ENST00000330503 DOPEY2Q9Y3R5 2298 aa13.16□□□□□ -0.3
DDX41-201ENST00000330503 TRBV19A0A075B6N1 114 aa13.16□□□□□ -0.3
DDX41-201ENST00000330503 IGHV3-35A0A0C4DH35 117 aa13.16□□□□□ -0.3
DDX41-201ENST00000330503 TRGC2P03986 189 aa13.16□□□□□ -0.3
DDX41-201ENST00000330503 PPIFP30405 207 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms