RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 NPIPB5A8MRT5 1133 aa11.51□□□□□ -0.57
EPHB3-201ENST00000330394 SRRM5B3KS81 715 aa11.51□□□□□ -0.57
EPHB3-201ENST00000330394 D6R8Y8 96 aa11.51□□□□□ -0.57
EPHB3-201ENST00000330394 NPIPB11E5RHQ5 1161 aa11.51□□□□□ -0.57
EPHB3-201ENST00000330394 SSC4DQ8WTU2 575 aa11.51□□□□□ -0.57
EPHB3-201ENST00000330394 PHLDA3Q9Y5J5 127 aa11.51□□□□□ -0.57
EPHB3-201ENST00000330394 FRMD6-AS1P0C7T7 363 aa11.5□□□□□ -0.57
EPHB3-201ENST00000330394 GAGE1Q13065 139 aa11.5□□□□□ -0.57
EPHB3-201ENST00000330394 MRPL52Q86TS9 123 aaKnown RBP11.5□□□□□ -0.57
EPHB3-201ENST00000330394 BCL6BQ8N143 479 aaPredicted RBP11.5□□□□□ -0.57
EPHB3-201ENST00000330394 RNASE8Q8TDE3 154 aaKnown RBP11.5□□□□□ -0.57
EPHB3-201ENST00000330394 C1RLQ9NZP8 487 aa11.5□□□□□ -0.57
EPHB3-201ENST00000330394 LY96Q9Y6Y9 160 aa11.5□□□□□ -0.57
EPHB3-201ENST00000330394 CCL25O15444 150 aa11.5□□□□□ -0.57
EPHB3-201ENST00000330394 PCDH15Q96QU1 1955 aa11.5□□□□□ -0.57
EPHB3-201ENST00000330394 FAM90A1Q86YD7 464 aa11.5□□□□□ -0.57
EPHB3-201ENST00000330394 PROK2Q9HC23 129 aa11.5□□□□□ -0.57
EPHB3-201ENST00000330394 MRPS18CQ9Y3D5 142 aaKnown RBP11.5□□□□□ -0.57
EPHB3-201ENST00000330394 C9orf172C9J069 976 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 KIR3DS1Q14943 382 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 ATP5L2Q7Z4Y8 100 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 DEFB104AQ8WTQ1 72 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 SIGMAR1Q99720 223 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.49□□□□□ -0.57
EPHB3-201ENST00000330394 K7EN84 100 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 IGKV3-15P01624 115 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 RPS20P60866 119 aaKnown RBP11.49□□□□□ -0.57
EPHB3-201ENST00000330394 GTSCR1Q86UQ5 136 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 SPACA3Q8IXA5 215 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 FAM231BA6NCW3 169 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 F2RL2O00254 374 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 VWC2Q2TAL6 325 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 TMEM170BQ5T4T1 132 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 NEUROG1Q92886 237 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 VKORC1Q9BQB6 163 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 RAB1BQ9H0U4 201 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 MS4A6AQ9H2W1 248 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 FRMPD3Q5JV73 1810 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 TCRAP04437 139 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 FAM74A4Q5TZK3 123 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 WDR86Q86TI4 376 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 OR5AN1Q8NGI8 311 aa11.49□□□□□ -0.57
EPHB3-201ENST00000330394 SMKR1H3BMG3 65 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 HSD52Q0P140 79 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 MTURNQ8N3F0 131 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 FAM168AQ92567 244 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 OTORQ9NRC9 128 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 RPUSD1Q9UJJ7 312 aaKnown RBP11.48□□□□□ -0.57
EPHB3-201ENST00000330394 IGKV1D-17A0A075B6S4 117 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 IGHV1-18A0A0C4DH31 117 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 DLX6P56179 175 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 TIMM23BQ5SRD1 257 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 OR4X2Q8NGF9 303 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 ZNF479Q96JC4 524 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 MED12LQ86YW9 2145 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 FAM90A9PA6NNJ1 464 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 CD5LO43866 347 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 UBTD1Q9HAC8 227 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 LINC00312Q9Y6C7 94 aa11.48□□□□□ -0.57
EPHB3-201ENST00000330394 LMO1P25800 156 aa11.47□□□□□ -0.57
EPHB3-201ENST00000330394 ZFP36L1Q07352 338 aaKnown RBP11.47□□□□□ -0.57
EPHB3-201ENST00000330394 COLQQ9Y215 455 aaPredicted RBP11.47□□□□□ -0.57
EPHB3-201ENST00000330394 PTPRQQ9UMZ3 2332 aa11.47□□□□□ -0.57
EPHB3-201ENST00000330394 TM4SF5O14894 197 aa11.47□□□□□ -0.57
EPHB3-201ENST00000330394 SCGB3A1Q96QR1 104 aa11.47□□□□□ -0.57
EPHB3-201ENST00000330394 ARMS2P0C7Q2 107 aa11.46□□□□□ -0.57
EPHB3-201ENST00000330394 KLF17Q5JT82 389 aaPredicted RBP11.46□□□□□ -0.57
EPHB3-201ENST00000330394 JMJD8Q96S16 334 aa11.46□□□□□ -0.57
EPHB3-201ENST00000330394 FGF23Q9GZV9 251 aaPredicted RBP11.46□□□□□ -0.57
EPHB3-201ENST00000330394 LYNX1G3V0Z9 82 aa11.46□□□□□ -0.57
EPHB3-201ENST00000330394 LYNX1P0DP58 116 aa11.46□□□□□ -0.57
EPHB3-201ENST00000330394 TTC32Q5I0X7 151 aa11.46□□□□□ -0.57
EPHB3-201ENST00000330394 PPP1R27Q86WC6 154 aa11.46□□□□□ -0.57
EPHB3-201ENST00000330394 AMN1Q8IY45 258 aa11.46□□□□□ -0.57
EPHB3-201ENST00000330394 ITGB1BP1O14713 200 aa11.46□□□□□ -0.58
EPHB3-201ENST00000330394 RNASE2P10153 161 aaKnown RBP11.46□□□□□ -0.58
EPHB3-201ENST00000330394 IFI27P40305 119 aaPredicted RBP11.46□□□□□ -0.58
EPHB3-201ENST00000330394 LCNL1Q6ZST4 164 aa11.46□□□□□ -0.58
EPHB3-201ENST00000330394 OR5A1Q8NGJ0 315 aa11.46□□□□□ -0.58
EPHB3-201ENST00000330394 ATP5LO75964 103 aa11.46□□□□□ -0.58
EPHB3-201ENST00000330394 LYZL1Q6UWQ5 148 aa11.46□□□□□ -0.58
EPHB3-201ENST00000330394 PRSS57Q6UWY2 283 aa11.46□□□□□ -0.58
EPHB3-201ENST00000330394 RNF125Q96EQ8 232 aa11.46□□□□□ -0.58
EPHB3-201ENST00000330394 RANBP2P49792 3224 aaKnown RBP11.45□□□□□ -0.58
EPHB3-201ENST00000330394 VDAC2P45880 294 aaPredicted RBP11.45□□□□□ -0.58
EPHB3-201ENST00000330394 Q6AWC8 147 aa11.45□□□□□ -0.58
EPHB3-201ENST00000330394 RAXQ9Y2V3 346 aa11.45□□□□□ -0.58
EPHB3-201ENST00000330394 DSCAML1Q8TD84 2053 aa11.45□□□□□ -0.58
EPHB3-201ENST00000330394 PRRC2CQ9Y520 2896 aaKnown RBP11.45□□□□□ -0.58
EPHB3-201ENST00000330394 SLC25A48Q6ZT89 311 aaKnown RBP11.45□□□□□ -0.58
EPHB3-201ENST00000330394 IGKV3-20P01619 116 aa11.45□□□□□ -0.58
EPHB3-201ENST00000330394 IGFL4Q6B9Z1 124 aa11.45□□□□□ -0.58
EPHB3-201ENST00000330394 Q8TAT8 98 aa11.45□□□□□ -0.58
EPHB3-201ENST00000330394 C21orf62Q9NYP8 219 aa11.45□□□□□ -0.58
EPHB3-201ENST00000330394 IGKV2-40A0A087WW87 121 aaPredicted RBP11.44□□□□□ -0.58
EPHB3-201ENST00000330394 IGKV2D-40P01614 121 aaPredicted RBP11.44□□□□□ -0.58
EPHB3-201ENST00000330394 RASL11AQ6T310 242 aa11.44□□□□□ -0.58
EPHB3-201ENST00000330394 RNFT1Q5M7Z0 435 aa11.44□□□□□ -0.58
EPHB3-201ENST00000330394 CCDC144NLQ6NUI1 221 aa11.44□□□□□ -0.58
EPHB3-201ENST00000330394 PRR7Q8TB68 274 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms