RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 PDPNQ86YL7 162 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 TEX45Q8NA69 505 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 AAMDCQ9H7C9 122 aa6.38□□□□□ -1.39
VMA21-201ENST00000330374 ADGRG4Q8IZF6 3080 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 MGAQ8IWI9 3026 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 P01737 135 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 CT45A6P0DMU7 189 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 CT45A5P0DMU8 189 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 CT45A7P0DMV0 189 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 PRB3Q04118 309 aaPredicted RBP6.37□□□□□ -1.39
VMA21-201ENST00000330374 LRRC10Q5BKY1 277 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 GSX1Q9H4S2 264 aaPredicted RBP6.37□□□□□ -1.39
VMA21-201ENST00000330374 TRAV8-6A0A0B4J262 113 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 SAP30O75446 220 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 ERHP84090 104 aaKnown RBP6.37□□□□□ -1.39
VMA21-201ENST00000330374 PATE2Q6UY27 113 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 C9orf106Q8NAJ2 232 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 TMEM191AQ9H0A3 160 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 FNDC4Q9H6D8 234 aaPredicted RBP6.37□□□□□ -1.39
VMA21-201ENST00000330374 IGHV1-18A0A0C4DH31 117 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 KBTBD11-OT1A0A1B0GTJ5 212 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 MRPL20Q9BYC9 149 aaKnown RBP6.37□□□□□ -1.39
VMA21-201ENST00000330374 HILPDAQ9Y5L2 63 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 CACNA1BQ00975 2339 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 IGHV3-72A0A0B4J1Y9 119 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 SP9P0CG40 484 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 GTSF1Q8WW33 167 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 ATMQ13315 3056 aa6.37□□□□□ -1.39
VMA21-201ENST00000330374 A0A1W2PRD5 423 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 A0A1W2PRF3 423 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 A0A1W2PRM7 423 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 GAGE12BA1L429 117 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 LAMTOR5O43504 91 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 IGKV3-15P01624 115 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 HTR1DP28221 377 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 CCL11P51671 97 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 FAM120AOSQ5T036 256 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 RUSC1-AS1Q66K80 236 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 RAB37Q96AX2 223 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 MAP1LC3CQ9BXW4 147 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 LOC389332A0A1B0GUA5 103 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 hADV38S2A0JD32 116 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 ENSAO43768 121 aaKnown RBP6.36□□□□□ -1.39
VMA21-201ENST00000330374 ARF6P62330 175 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 DIAPH2-AS1Q14236 149 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 ZCCHC24Q8N2G6 241 aaKnown RBP6.36□□□□□ -1.39
VMA21-201ENST00000330374 CIARTQ8N365 385 aaPredicted RBP6.36□□□□□ -1.39
VMA21-201ENST00000330374 MDS2Q8NDY4 140 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 COL25A1Q9BXS0 654 aaPredicted RBP6.36□□□□□ -1.39
VMA21-201ENST00000330374 RPP21Q9H633 154 aaKnown RBP6.36□□□□□ -1.39
VMA21-201ENST00000330374 EPDR1Q9UM22 224 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 CSMD1Q96PZ7 3565 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 KIR2DL2P43627 348 aaPredicted RBP6.36□□□□□ -1.39
VMA21-201ENST00000330374 SMIM15Q7Z3B0 74 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 OR8A1Q8NGG7 326 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 ATP6V0BQ99437 205 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 MEGF9Q9H1U4 602 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 ST20Q9HBF5 79 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 JKAMPQ9P055 326 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 ZNF257Q9Y2Q1 563 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 CACNA1HO95180 2353 aa6.36□□□□□ -1.39
VMA21-201ENST00000330374 CCL3L1P16619 93 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 KLF5Q13887 457 aaPredicted RBP6.35□□□□□ -1.39
VMA21-201ENST00000330374 ANXA2RQ3ZCQ2 193 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 C2orf83Q53S99 150 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 PRNTQ86SH4 94 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 WIPF2Q8TF74 440 aaPredicted RBP6.35□□□□□ -1.39
VMA21-201ENST00000330374 FXYD5Q96DB9 178 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 CHRDL1Q9BU40 450 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 COL8A1P27658 744 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 WT1-ASQ06250 92 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 SARAFQ96BY9 339 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 AP1S3Q96PC3 154 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 MRPL32Q9BYC8 188 aaKnown RBP6.35□□□□□ -1.39
VMA21-201ENST00000330374 ZNF430Q9H8G1 570 aaPredicted RBP6.35□□□□□ -1.39
VMA21-201ENST00000330374 C7orf71A4D174 169 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 A8MWL6 223 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 C12orf54Q6X4T0 127 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 DMXL1Q9Y485 3027 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 GPR183P32249 361 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 DEFB125Q8N687 156 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 STXBP6Q8NFX7 210 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 OR1L8Q8NGR8 309 aa6.35□□□□□ -1.39
VMA21-201ENST00000330374 H1FXQ92522 213 aaKnown RBP6.35□□□□□ -1.39
VMA21-201ENST00000330374 TMSB15BA0A087X1C1 80 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 OR2J3O76001 311 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 NBEAP1P0C6P0 100 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 SRSF6Q13247 344 aaKnown RBP6.34□□□□□ -1.39
VMA21-201ENST00000330374 WFDC3Q8IUB2 231 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 OR1L4Q8NGR5 311 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 ADTRPQ96IZ2 230 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 GPR82Q96P67 336 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 TPSG1Q9NRR2 321 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 MED13LQ71F56 2210 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 PIEZO2Q9H5I5 2752 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 SERTM2A0A1B0GWG4 89 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 GAGE10A6NGK3 116 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 NCR2O95944 276 aa6.34□□□□□ -1.39
VMA21-201ENST00000330374 APOHP02749 345 aaPredicted RBP6.34□□□□□ -1.39
VMA21-201ENST00000330374 ACP1P24666 158 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms