RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 C22orf46C9J442 243 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 COTL1Q14019 142 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 NDUFB3O43676 98 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 MC5RP33032 325 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 ZNF138P52744 262 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 C3orf36Q3SXR2 165 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 IGFL2Q6UWQ7 119 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 PRNTQ86SH4 94 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 ZADH2Q8N4Q0 377 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 NDFIP1Q9BT67 221 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 IGHV3-72A0A0B4J1Y9 119 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 C19orf71A6NCJ1 209 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 HLA-DRB1P01911 266 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 CD40P25942 277 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 CEACAM8P31997 349 aaPredicted RBP11.72□□□□□ -0.53
SSBP3-201ENST00000326956 CDKN1BP46527 198 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 LYZP61626 148 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 HIGD1AQ9Y241 93 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 MUC21A0A0G2JKD1 596 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 MUC21A0A140T8X8 626 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 FAM231BA6NCW3 169 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 RPL27AP46776 148 aaKnown RBP11.72□□□□□ -0.53
SSBP3-201ENST00000326956 MUC21Q5SSG8 566 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 BVES-AS1Q5T3Y7 98 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 GUCD1Q96NT3 240 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 MCRIP2Q9BUT9 160 aaKnown RBP11.72□□□□□ -0.53
SSBP3-201ENST00000326956 TPSG1Q9NRR2 321 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 RNF24Q9Y225 148 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 CEP250Q9BV73 2442 aa11.72□□□□□ -0.53
SSBP3-201ENST00000326956 TRAV8-1A0A0A6YYK1 113 aa11.71□□□□□ -0.53
SSBP3-201ENST00000326956 FAM27E3Q08E93 113 aa11.71□□□□□ -0.53
SSBP3-201ENST00000326956 PLA2G2CQ5R387 149 aa11.71□□□□□ -0.53
SSBP3-201ENST00000326956 C8orf46Q8TAG6 207 aa11.71□□□□□ -0.53
SSBP3-201ENST00000326956 SH3BGRL2Q9UJC5 107 aa11.71□□□□□ -0.53
SSBP3-201ENST00000326956 PPIAL4EA0A075B759 164 aa11.71□□□□□ -0.54
SSBP3-201ENST00000326956 PPIAL4DF5H284 164 aa11.71□□□□□ -0.54
SSBP3-201ENST00000326956 IGLV2-23P01705 113 aa11.71□□□□□ -0.54
SSBP3-201ENST00000326956 PPIAL4FP0DN26 164 aa11.71□□□□□ -0.54
SSBP3-201ENST00000326956 LGALS7P47929 136 aa11.71□□□□□ -0.54
SSBP3-201ENST00000326956 FAM71F2Q6NXP2 309 aa11.71□□□□□ -0.54
SSBP3-201ENST00000326956 GOLT1AQ6ZVE7 132 aa11.71□□□□□ -0.54
SSBP3-201ENST00000326956 CIARTQ8N365 385 aaPredicted RBP11.71□□□□□ -0.54
SSBP3-201ENST00000326956 RPRMLQ8N4K4 120 aa11.71□□□□□ -0.54
SSBP3-201ENST00000326956 VPS25Q9BRG1 176 aa11.71□□□□□ -0.54
SSBP3-201ENST00000326956 MS4A6AQ9H2W1 248 aa11.71□□□□□ -0.54
SSBP3-201ENST00000326956 TAX1BP3O14907 124 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 GP9P14770 177 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 CCL17Q92583 94 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 PMCHL2Q9BQD1 86 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 TMUB1Q9BVT8 246 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 OTORQ9NRC9 128 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 WT1P19544 449 aaPredicted RBP11.7□□□□□ -0.54
SSBP3-201ENST00000326956 FA2HQ7L5A8 372 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 Q86TA4 180 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 AP5S1Q9NUS5 200 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 A0A1B0GUT8 65 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 OR2T8A6NH00 312 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 RIGQ13278 110 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 TMEM108Q6UXF1 575 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 DEFB125Q8N687 156 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 PRSS3P2Q8NHM4 247 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 TPPP3Q9BW30 176 aa11.7□□□□□ -0.54
SSBP3-201ENST00000326956 CSN1S1P47710 185 aa11.69□□□□□ -0.54
SSBP3-201ENST00000326956 HIST1H1AQ02539 215 aaPredicted RBP11.69□□□□□ -0.54
SSBP3-201ENST00000326956 C1orf185Q5T7R7 199 aa11.69□□□□□ -0.54
SSBP3-201ENST00000326956 SRSF12Q8WXF0 261 aaKnown RBP11.69□□□□□ -0.54
SSBP3-201ENST00000326956 HAX1O00165 279 aa11.69□□□□□ -0.54
SSBP3-201ENST00000326956 CRYGCP07315 174 aa11.69□□□□□ -0.54
SSBP3-201ENST00000326956 ARF6P62330 175 aa11.69□□□□□ -0.54
SSBP3-201ENST00000326956 LDLRAD2Q5SZI1 272 aa11.69□□□□□ -0.54
SSBP3-201ENST00000326956 AMMECR1LQ6DCA0 310 aa11.69□□□□□ -0.54
SSBP3-201ENST00000326956 TMEM116Q8NCL8 245 aa11.69□□□□□ -0.54
SSBP3-201ENST00000326956 SCRT2Q9NQ03 307 aa11.69□□□□□ -0.54
SSBP3-201ENST00000326956 A0A087X0K7 114 aa11.68□□□□□ -0.54
SSBP3-201ENST00000326956 C17orf100A8MU93 164 aa11.68□□□□□ -0.54
SSBP3-201ENST00000326956 APOHP02749 345 aaPredicted RBP11.68□□□□□ -0.54
SSBP3-201ENST00000326956 LINC00311Q8N616 119 aa11.68□□□□□ -0.54
SSBP3-201ENST00000326956 CHTOPQ9Y3Y2 248 aaKnown RBP11.68□□□□□ -0.54
SSBP3-201ENST00000326956 RUSC1-AS1Q66K80 236 aa11.68□□□□□ -0.54
SSBP3-201ENST00000326956 BPIFA4PQ86YQ2 179 aa11.68□□□□□ -0.54
SSBP3-201ENST00000326956 WFDC8Q8IUA0 241 aa11.68□□□□□ -0.54
SSBP3-201ENST00000326956 EXOC3-AS1Q8N2X6 119 aa11.68□□□□□ -0.54
SSBP3-201ENST00000326956 RITA1Q96K30 269 aa11.68□□□□□ -0.54
SSBP3-201ENST00000326956 FAM215AQ9Y5M1 114 aa11.68□□□□□ -0.54
SSBP3-201ENST00000326956 K7EQM0 130 aa11.67□□□□□ -0.54
SSBP3-201ENST00000326956 RBP4P02753 201 aa11.67□□□□□ -0.54
SSBP3-201ENST00000326956 PSG1P11464 419 aa11.67□□□□□ -0.54
SSBP3-201ENST00000326956 GPR183P32249 361 aa11.67□□□□□ -0.54
SSBP3-201ENST00000326956 RHOGP84095 191 aa11.67□□□□□ -0.54
SSBP3-201ENST00000326956 TEX45Q8NA69 505 aa11.67□□□□□ -0.54
SSBP3-201ENST00000326956 PKDREJQ9NTG1 2253 aa11.67□□□□□ -0.54
SSBP3-201ENST00000326956 CD5LO43866 347 aa11.66□□□□□ -0.54
SSBP3-201ENST00000326956 CLEC2AQ6UVW9 174 aa11.66□□□□□ -0.54
SSBP3-201ENST00000326956 OR10AG1Q8NH19 301 aa11.66□□□□□ -0.54
SSBP3-201ENST00000326956 AP1S3Q96PC3 154 aa11.66□□□□□ -0.54
SSBP3-201ENST00000326956 RASL11BQ9BPW5 248 aa11.66□□□□□ -0.54
SSBP3-201ENST00000326956 TPRP12270 2363 aaKnown RBP11.66□□□□□ -0.54
SSBP3-201ENST00000326956 NPIPB6E9PJ23 425 aa11.66□□□□□ -0.54
SSBP3-201ENST00000326956 LYPD2Q6UXB3 125 aa11.66□□□□□ -0.54
SSBP3-201ENST00000326956 C22orf34Q6ZV56 151 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms