RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CX3CL1P78423 397 aa12.49□□□□□ -0.41
VARS2-201ENST00000321897 OR10J3Q5JRS4 329 aa12.49□□□□□ -0.41
VARS2-201ENST00000321897 TMEM136Q6ZRR5 245 aa12.49□□□□□ -0.41
VARS2-201ENST00000321897 SFXN3Q9BWM7 321 aa12.49□□□□□ -0.41
VARS2-201ENST00000321897 J3QW42 95 aa12.48□□□□□ -0.41
VARS2-201ENST00000321897 IFI27L2Q9H2X8 130 aa12.48□□□□□ -0.41
VARS2-201ENST00000321897 POLQO75417 2590 aa12.48□□□□□ -0.41
VARS2-201ENST00000321897 DSPP15924 2871 aaKnown RBP12.48□□□□□ -0.41
VARS2-201ENST00000321897 MUC22E2RYF6 1773 aaPredicted RBP12.48□□□□□ -0.41
VARS2-201ENST00000321897 YPEL1O60688 119 aa12.48□□□□□ -0.41
VARS2-201ENST00000321897 SLAQ13239 276 aa12.48□□□□□ -0.41
VARS2-201ENST00000321897 MBNL2Q5VZF2 373 aaKnown RBP12.48□□□□□ -0.41
VARS2-201ENST00000321897 YPEL2Q96QA6 119 aa12.48□□□□□ -0.41
VARS2-201ENST00000321897 NAV2Q8IVL1 2488 aa12.48□□□□□ -0.41
VARS2-201ENST00000321897 TRAV30A0A087WSZ9 112 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 TGFAP01135 160 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 RPL15P61313 204 aaKnown RBP12.47□□□□□ -0.41
VARS2-201ENST00000321897 SRSF9Q13242 221 aaKnown RBP eCLIP12.47□□□□□ -0.41
VARS2-201ENST00000321897 TWIST1Q15672 202 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 GRAMD2BQ96HH9 432 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 PLSCR4Q9NRQ2 329 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 TP73-AS1Q9UF72 201 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 C15orf61A6NNL5 157 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 NBEAP1P0C6P0 100 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 PYGO2Q9BRQ0 406 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 NDFIP1Q9BT67 221 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 TRAV9-1A0A075B6T8 112 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 IGKV3-15P01624 115 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 RPL7P18124 248 aaKnown RBP12.47□□□□□ -0.41
VARS2-201ENST00000321897 SLC25A33Q9BSK2 321 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 IL4P05112 153 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 HTN1P15515 57 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 COL8A2P25067 703 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 C18orf32Q8TCD1 76 aa12.47□□□□□ -0.41
VARS2-201ENST00000321897 COL25A1Q9BXS0 654 aaPredicted RBP12.47□□□□□ -0.41
VARS2-201ENST00000321897 MBNL3Q9NUK0 354 aaKnown RBP12.47□□□□□ -0.41
VARS2-201ENST00000321897 GFRA3O60609 400 aa12.46□□□□□ -0.41
VARS2-201ENST00000321897 CACNG7P62955 275 aa12.46□□□□□ -0.41
VARS2-201ENST00000321897 PSG9Q00887 426 aa12.46□□□□□ -0.41
VARS2-201ENST00000321897 MTURNQ8N3F0 131 aa12.46□□□□□ -0.41
VARS2-201ENST00000321897 NHP2Q9NX24 153 aaKnown RBP12.46□□□□□ -0.41
VARS2-201ENST00000321897 HIGD1AQ9Y241 93 aa12.46□□□□□ -0.41
VARS2-201ENST00000321897 SPTBN5Q9NRC6 3674 aaKnown RBP12.46□□□□□ -0.41
VARS2-201ENST00000321897 ZNF414Q96IQ9 312 aa12.46□□□□□ -0.41
VARS2-201ENST00000321897 TRAV8-1A0A0A6YYK1 113 aa12.46□□□□□ -0.42
VARS2-201ENST00000321897 H7C2G1 150 aa12.46□□□□□ -0.42
VARS2-201ENST00000321897 DIAPH2-AS1Q14236 149 aa12.46□□□□□ -0.42
VARS2-201ENST00000321897 C1orf162Q8NEQ5 155 aaPredicted RBP12.46□□□□□ -0.42
VARS2-201ENST00000321897 NUP35Q8NFH5 326 aa12.46□□□□□ -0.42
VARS2-201ENST00000321897 FAM57AQ8TBR7 257 aa12.46□□□□□ -0.42
VARS2-201ENST00000321897 LINC00527Q9UJ94 153 aa12.46□□□□□ -0.42
VARS2-201ENST00000321897 TRBV20OR9-2A0A075B6H5 130 aa12.45□□□□□ -0.42
VARS2-201ENST00000321897 ITGB1BP1O14713 200 aa12.45□□□□□ -0.42
VARS2-201ENST00000321897 S100A4P26447 101 aaKnown RBP12.45□□□□□ -0.42
VARS2-201ENST00000321897 YPEL4Q96NS1 127 aa12.45□□□□□ -0.42
VARS2-201ENST00000321897 FOXA2Q9Y261 457 aaPredicted RBP12.45□□□□□ -0.42
VARS2-201ENST00000321897 YPEL3P61236 119 aaPredicted RBP12.45□□□□□ -0.42
VARS2-201ENST00000321897 OR52E5Q8NH55 327 aa12.45□□□□□ -0.42
VARS2-201ENST00000321897 HIST1H4GQ99525 98 aa12.45□□□□□ -0.42
VARS2-201ENST00000321897 C19orf67A6NJJ6 358 aa12.44□□□□□ -0.42
VARS2-201ENST00000321897 RPP21Q9H633 154 aaKnown RBP12.44□□□□□ -0.42
VARS2-201ENST00000321897 TMEM160Q9NX00 188 aa12.44□□□□□ -0.42
VARS2-201ENST00000321897 JKAMPQ9P055 326 aa12.44□□□□□ -0.42
VARS2-201ENST00000321897 UPK2O00526 184 aa12.44□□□□□ -0.42
VARS2-201ENST00000321897 WNT2P09544 360 aa12.44□□□□□ -0.42
VARS2-201ENST00000321897 STXBP6Q8NFX7 210 aa12.44□□□□□ -0.42
VARS2-201ENST00000321897 ZNF502Q8TBZ5 544 aa12.44□□□□□ -0.42
VARS2-201ENST00000321897 A0A0G2JNJ9 132 aa12.43□□□□□ -0.42
VARS2-201ENST00000321897 Q0VG73 95 aa12.43□□□□□ -0.42
VARS2-201ENST00000321897 TMEM144Q7Z5S9 345 aa12.43□□□□□ -0.42
VARS2-201ENST00000321897 OR1N2Q8NGR9 330 aa12.43□□□□□ -0.42
VARS2-201ENST00000321897 Q9UFV3 132 aa12.43□□□□□ -0.42
VARS2-201ENST00000321897 K7EN84 100 aa12.43□□□□□ -0.42
VARS2-201ENST00000321897 CEACAM3P40198 252 aa12.43□□□□□ -0.42
VARS2-201ENST00000321897 LY6DQ14210 128 aa12.43□□□□□ -0.42
VARS2-201ENST00000321897 UTF1Q5T230 341 aa12.43□□□□□ -0.42
VARS2-201ENST00000321897 RPUSD1Q9UJJ7 312 aaKnown RBP12.43□□□□□ -0.42
VARS2-201ENST00000321897 NACAE9PAV3 2078 aa12.43□□□□□ -0.42
VARS2-201ENST00000321897 A0A1B0GWB2 263 aa12.43□□□□□ -0.42
VARS2-201ENST00000321897 SYS1-DBNDD2H3BUS1 97 aa12.43□□□□□ -0.42
VARS2-201ENST00000321897 SMIM13P0DJ93 91 aa12.43□□□□□ -0.42
VARS2-201ENST00000321897 LY6EQ16553 131 aa12.43□□□□□ -0.42
VARS2-201ENST00000321897 TMEM200BQ69YZ2 307 aa12.43□□□□□ -0.42
VARS2-201ENST00000321897 ERVK11-1P61568 191 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 HIST1H1AQ02539 215 aaPredicted RBP12.42□□□□□ -0.42
VARS2-201ENST00000321897 KLRD1Q13241 179 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 GUSBP1Q15486 140 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 VWC2Q2TAL6 325 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 RNASE6Q93091 150 aaKnown RBP12.42□□□□□ -0.42
VARS2-201ENST00000321897 ST20Q9HBF5 79 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 RAXQ9Y2V3 346 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 A0A1B0GV72 72 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 MC5RP33032 325 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 LRRK2Q5S007 2527 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 TMEM189A5PLL7 270 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 FAM231BA6NCW3 169 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 SAP30O75446 220 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 FAM169BQ8N8A8 192 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 FAM168AQ92567 244 aa12.42□□□□□ -0.42
VARS2-201ENST00000321897 GPR82Q96P67 336 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms