RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 ZNF124Q15973 351 aa10.98□□□□□ -0.65
AFF3-201ENST00000317233 ZNF501Q96CX3 271 aaPredicted RBP10.98□□□□□ -0.65
AFF3-201ENST00000317233 VWC2Q2TAL6 325 aa10.98□□□□□ -0.65
AFF3-201ENST00000317233 RBM38Q9H0Z9 239 aaKnown RBP10.98□□□□□ -0.65
AFF3-201ENST00000317233 FXYD1O00168 92 aa10.98□□□□□ -0.65
AFF3-201ENST00000317233 CCL20P78556 96 aa10.98□□□□□ -0.65
AFF3-201ENST00000317233 TMEM187Q14656 261 aa10.98□□□□□ -0.65
AFF3-201ENST00000317233 TMEM133Q9H2Q1 129 aa10.98□□□□□ -0.65
AFF3-201ENST00000317233 OR9G9P0C7N8 305 aa10.98□□□□□ -0.65
AFF3-201ENST00000317233 SUPT4H1P63272 117 aaKnown RBP10.98□□□□□ -0.65
AFF3-201ENST00000317233 NEUROG3Q9Y4Z2 214 aa10.98□□□□□ -0.65
AFF3-201ENST00000317233 NGFRP08138 427 aa10.98□□□□□ -0.65
AFF3-201ENST00000317233 FUSP35637 526 aaKnown RBP eCLIP10.98□□□□□ -0.65
AFF3-201ENST00000317233 FAM90A1Q86YD7 464 aa10.98□□□□□ -0.65
AFF3-201ENST00000317233 ZNF660Q6AZW8 331 aaPredicted RBP10.98□□□□□ -0.65
AFF3-201ENST00000317233 SCN10AQ9Y5Y9 1956 aa10.97□□□□□ -0.65
AFF3-201ENST00000317233 PPP1R32Q7Z5V6 425 aa10.97□□□□□ -0.65
AFF3-201ENST00000317233 TMEM219Q86XT9 240 aa10.97□□□□□ -0.65
AFF3-201ENST00000317233 ATP5G3P48201 142 aa10.97□□□□□ -0.65
AFF3-201ENST00000317233 CTSBP07858 339 aa10.97□□□□□ -0.65
AFF3-201ENST00000317233 ZNF138P52744 262 aa10.97□□□□□ -0.65
AFF3-201ENST00000317233 CECR9P0C854 216 aa10.96□□□□□ -0.65
AFF3-201ENST00000317233 TIMM17AQ99595 171 aa10.96□□□□□ -0.65
AFF3-201ENST00000317233 WFDC6Q9BQY6 131 aa10.96□□□□□ -0.65
AFF3-201ENST00000317233 PKD1L3Q7Z443 1732 aa10.96□□□□□ -0.65
AFF3-201ENST00000317233 IGKV2-40A0A087WW87 121 aaPredicted RBP10.96□□□□□ -0.65
AFF3-201ENST00000317233 IL18BPO95998 194 aa10.96□□□□□ -0.65
AFF3-201ENST00000317233 IGKV2D-40P01614 121 aaPredicted RBP10.96□□□□□ -0.65
AFF3-201ENST00000317233 ZAR1Q86SH2 424 aa10.96□□□□□ -0.65
AFF3-201ENST00000317233 LHFPL6Q9Y693 200 aa10.96□□□□□ -0.65
AFF3-201ENST00000317233 AMBPP02760 352 aa10.96□□□□□ -0.65
AFF3-201ENST00000317233 MP68P56378 58 aa10.96□□□□□ -0.66
AFF3-201ENST00000317233 KIAA0040Q15053 153 aa10.96□□□□□ -0.66
AFF3-201ENST00000317233 BMPERQ8N8U9 685 aa10.96□□□□□ -0.66
AFF3-201ENST00000317233 TMEM190Q8WZ59 177 aa10.96□□□□□ -0.66
AFF3-201ENST00000317233 USMG5Q96IX5 58 aa10.96□□□□□ -0.66
AFF3-201ENST00000317233 MAJINQ3KP22 176 aa10.95□□□□□ -0.66
AFF3-201ENST00000317233 NEGR1Q7Z3B1 354 aa10.95□□□□□ -0.66
AFF3-201ENST00000317233 SHISA4Q96DD7 197 aa10.95□□□□□ -0.66
AFF3-201ENST00000317233 PILRAQ9UKJ1 303 aa10.95□□□□□ -0.66
AFF3-201ENST00000317233 SELENOKQ9Y6D0 94 aa10.95□□□□□ -0.66
AFF3-201ENST00000317233 PTPRFP10586 1907 aa10.95□□□□□ -0.66
AFF3-201ENST00000317233 D6R8Y8 96 aa10.95□□□□□ -0.66
AFF3-201ENST00000317233 NOVP48745 357 aa10.95□□□□□ -0.66
AFF3-201ENST00000317233 RPL15P61313 204 aaKnown RBP10.95□□□□□ -0.66
AFF3-201ENST00000317233 FAM216BQ8N7L0 139 aa10.95□□□□□ -0.66
AFF3-201ENST00000317233 MIXL1Q9H2W2 232 aa10.95□□□□□ -0.66
AFF3-201ENST00000317233 SRXN1Q9BYN0 137 aa10.95□□□□□ -0.66
AFF3-201ENST00000317233 PRB2P02812 416 aaPredicted RBP10.95□□□□□ -0.66
AFF3-201ENST00000317233 IFITM1P13164 125 aa10.95□□□□□ -0.66
AFF3-201ENST00000317233 RPUSD1Q9UJJ7 312 aaKnown RBP10.95□□□□□ -0.66
AFF3-201ENST00000317233 TAF1LQ8IZX4 1826 aa10.95□□□□□ -0.66
AFF3-201ENST00000317233 PRB4P10163 310 aaPredicted RBP10.95□□□□□ -0.66
AFF3-201ENST00000317233 RLFQ13129 1914 aa10.95□□□□□ -0.66
AFF3-201ENST00000317233 CFHR2P36980 270 aa10.95□□□□□ -0.66
AFF3-201ENST00000317233 NMBP08949 121 aa10.94□□□□□ -0.66
AFF3-201ENST00000317233 CFHR3Q02985 330 aa10.94□□□□□ -0.66
AFF3-201ENST00000317233 UTF1Q5T230 341 aa10.94□□□□□ -0.66
AFF3-201ENST00000317233 CCDC168Q8NDH2 2452 aa10.94□□□□□ -0.66
AFF3-201ENST00000317233 PRB1P04280 392 aa10.94□□□□□ -0.66
AFF3-201ENST00000317233 LIME1Q9H400 295 aa10.94□□□□□ -0.66
AFF3-201ENST00000317233 PAPPAQ13219 1627 aa10.94□□□□□ -0.66
AFF3-201ENST00000317233 A0A087WWC5 75 aa10.94□□□□□ -0.66
AFF3-201ENST00000317233 NHLRC3Q5JS37 347 aa10.94□□□□□ -0.66
AFF3-201ENST00000317233 TRPT1Q86TN4 253 aaKnown RBP10.94□□□□□ -0.66
AFF3-201ENST00000317233 ZNF503Q96F45 646 aa10.94□□□□□ -0.66
AFF3-201ENST00000317233 OSTCQ9NRP0 149 aa10.94□□□□□ -0.66
AFF3-201ENST00000317233 FOXG1P55316 489 aaPredicted RBP10.94□□□□□ -0.66
AFF3-201ENST00000317233 ATP1A1-AS1Q5TC04 95 aa10.94□□□□□ -0.66
AFF3-201ENST00000317233 TMEM170AQ8WVE7 144 aa10.94□□□□□ -0.66
AFF3-201ENST00000317233 SPANXCQ9NY87 97 aa10.94□□□□□ -0.66
AFF3-201ENST00000317233 SAA2-SAA4A0A096LPE2 208 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 IGHV2OR16-5A0A0B4J2B6 119 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 C17orf98A8MV24 154 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 SAA2P0DJI9 122 aaPredicted RBP10.93□□□□□ -0.66
AFF3-201ENST00000317233 LINC00527Q9UJ94 153 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 PRSS29PA6NIE9 313 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 ANGP03950 147 aaKnown RBP10.93□□□□□ -0.66
AFF3-201ENST00000317233 A0A1W2PQF6 199 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 PMS2P5A8MQ11 134 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 B4DSR2 109 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 FAM201AQ5SY85 155 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 MRPL14Q6P1L8 145 aaKnown RBP10.93□□□□□ -0.66
AFF3-201ENST00000317233 DSCAMO60469 2012 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 IFITM3Q01628 133 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 MBNL3Q9NUK0 354 aaKnown RBP10.93□□□□□ -0.66
AFF3-201ENST00000317233 STRCQ7RTU9 1775 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 SLC25A48Q6ZT89 311 aaKnown RBP10.93□□□□□ -0.66
AFF3-201ENST00000317233 TRBV20-1A0A075B6N2 111 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 TRAV13-2A0A0B4J235 113 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 A0A1W2PRE2 83 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 TCRBV5S1A1TA0A578 114 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 GUSBP1Q15486 140 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 TSKUQ8WUA8 353 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 R3HDMLQ9H3Y0 253 aa10.93□□□□□ -0.66
AFF3-201ENST00000317233 IGHG2P01859 326 aa10.92□□□□□ -0.66
AFF3-201ENST00000317233 C20orf204Q6ZNR8 217 aa10.92□□□□□ -0.66
AFF3-201ENST00000317233 EML5Q05BV3 1969 aa10.92□□□□□ -0.66
AFF3-201ENST00000317233 YPEL1O60688 119 aa10.92□□□□□ -0.66
AFF3-201ENST00000317233 COX6A1P12074 109 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms