RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 UNQ5815/PRO19632Q6UWF5 114 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 TMEM219Q86XT9 240 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 C5orf56Q8N8D9 126 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 IMMP2LQ96T52 175 aa14.4□□□□□ -0.1
CCDC43-201ENST00000315286 SOX21Q9Y651 276 aaPredicted RBP14.4□□□□□ -0.1
CCDC43-201ENST00000315286 PGPA6NDG6 321 aa14.39□□□□□ -0.11
CCDC43-201ENST00000315286 PPP5D1E7EU14 171 aa14.39□□□□□ -0.11
CCDC43-201ENST00000315286 PEX7O00628 323 aa14.39□□□□□ -0.11
CCDC43-201ENST00000315286 IL4P05112 153 aa14.39□□□□□ -0.11
CCDC43-201ENST00000315286 DSCR9P59020 149 aa14.39□□□□□ -0.11
CCDC43-201ENST00000315286 YPEL3P61236 119 aaPredicted RBP14.39□□□□□ -0.11
CCDC43-201ENST00000315286 FOXL1Q12952 345 aa14.39□□□□□ -0.11
CCDC43-201ENST00000315286 RNF125Q96EQ8 232 aa14.39□□□□□ -0.11
CCDC43-201ENST00000315286 FBXL7Q9UJT9 491 aa14.39□□□□□ -0.11
CCDC43-201ENST00000315286 WI2-2373I1.2A0A1W2PRP0 233 aa14.38□□□□□ -0.11
CCDC43-201ENST00000315286 SLC17A3O00476 420 aa14.38□□□□□ -0.11
CCDC43-201ENST00000315286 GNG5P63218 68 aa14.38□□□□□ -0.11
CCDC43-201ENST00000315286 FAM110DQ8TAY7 271 aaPredicted RBP14.38□□□□□ -0.11
CCDC43-201ENST00000315286 MEGF9Q9H1U4 602 aa14.38□□□□□ -0.11
CCDC43-201ENST00000315286 CDC42EP3Q9UKI2 254 aa14.38□□□□□ -0.11
CCDC43-201ENST00000315286 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.38□□□□□ -0.113e-9■■■□□ 18.1
CCDC43-201ENST00000315286 TRGC1P0CF51 173 aa14.38□□□□□ -0.11
CCDC43-201ENST00000315286 TAS2R60P59551 318 aa14.38□□□□□ -0.11
CCDC43-201ENST00000315286 ERVFC1-1P60608 527 aa14.38□□□□□ -0.11
CCDC43-201ENST00000315286 SHANK2-AS3Q9BTD1 123 aa14.38□□□□□ -0.11
CCDC43-201ENST00000315286 TMEM14CQ9P0S9 112 aa14.38□□□□□ -0.11
CCDC43-201ENST00000315286 USP9YO00507 2555 aaPredicted RBP14.37□□□□□ -0.11
CCDC43-201ENST00000315286 TRAV34A0A0B4J273 112 aa14.37□□□□□ -0.11
CCDC43-201ENST00000315286 SLC25A5P05141 298 aaKnown RBP14.37□□□□□ -0.11
CCDC43-201ENST00000315286 CNN1P51911 297 aaKnown RBP14.37□□□□□ -0.11
CCDC43-201ENST00000315286 NDUFA6P56556 154 aa14.37□□□□□ -0.11
CCDC43-201ENST00000315286 BCL6BQ8N143 479 aaPredicted RBP14.37□□□□□ -0.11
CCDC43-201ENST00000315286 HIF1ANQ9NWT6 349 aa14.37□□□□□ -0.11
CCDC43-201ENST00000315286 ZNF586Q9NXT0 402 aa14.37□□□□□ -0.11
CCDC43-201ENST00000315286 EPDR1Q9UM22 224 aa14.37□□□□□ -0.11
CCDC43-201ENST00000315286 OR2T8A6NH00 312 aa14.37□□□□□ -0.11
CCDC43-201ENST00000315286 B4DSR2 109 aa14.37□□□□□ -0.11
CCDC43-201ENST00000315286 G3V318 75 aa14.37□□□□□ -0.11
CCDC43-201ENST00000315286 H3BRN7 92 aa14.37□□□□□ -0.11
CCDC43-201ENST00000315286 GCGP01275 180 aa14.37□□□□□ -0.11
CCDC43-201ENST00000315286 USF2Q15853 346 aaPredicted RBP14.37□□□□□ -0.11
CCDC43-201ENST00000315286 PTPN13Q12923 2485 aa14.36□□□□□ -0.11
CCDC43-201ENST00000315286 AMY1AP04745 511 aa14.36□□□□□ -0.11
CCDC43-201ENST00000315286 TYMSP04818 313 aa14.36□□□□□ -0.11
CCDC43-201ENST00000315286 HIST1H1EP10412 219 aaKnown RBP14.36□□□□□ -0.11
CCDC43-201ENST00000315286 NHLRC2Q8NBF2 726 aa14.36□□□□□ -0.11
CCDC43-201ENST00000315286 TCEAL7Q9BRU2 100 aa14.36□□□□□ -0.11
CCDC43-201ENST00000315286 RNASE7Q9H1E1 156 aaKnown RBP14.36□□□□□ -0.11
CCDC43-201ENST00000315286 Q9H3A6 140 aa14.36□□□□□ -0.11
CCDC43-201ENST00000315286 ZNF320A2RRD8 509 aa14.35□□□□□ -0.11
CCDC43-201ENST00000315286 ISLRO14498 428 aa14.35□□□□□ -0.11
CCDC43-201ENST00000315286 AVPP01185 164 aa14.35□□□□□ -0.11
CCDC43-201ENST00000315286 CTSGP08311 255 aa14.35□□□□□ -0.11
CCDC43-201ENST00000315286 MGST1P10620 155 aaKnown RBP14.35□□□□□ -0.11
CCDC43-201ENST00000315286 HIST1H1BP16401 226 aaKnown RBP14.35□□□□□ -0.11
CCDC43-201ENST00000315286 FCGR2BP31994 310 aaPredicted RBP14.35□□□□□ -0.11
CCDC43-201ENST00000315286 LINC00518Q8N0U6 118 aa14.35□□□□□ -0.11
CCDC43-201ENST00000315286 TMEM68Q96MH6 324 aa14.35□□□□□ -0.11
CCDC43-201ENST00000315286 IL36BQ9NZH7 164 aa14.35□□□□□ -0.11
CCDC43-201ENST00000315286 MOB4Q9Y3A3 225 aa14.35□□□□□ -0.11
CCDC43-201ENST00000315286 V9GYV3 84 aa14.35□□□□□ -0.11
CCDC43-201ENST00000315286 SLC25A16P16260 332 aa14.35□□□□□ -0.11
CCDC43-201ENST00000315286 COL8A1P27658 744 aa14.35□□□□□ -0.11
CCDC43-201ENST00000315286 KLK9Q2XQG4 91 aa14.35□□□□□ -0.11
CCDC43-201ENST00000315286 KLK9Q9UKQ9 250 aa14.35□□□□□ -0.11
CCDC43-201ENST00000315286 CSPG4Q6UVK1 2322 aa14.34□□□□□ -0.11
CCDC43-201ENST00000315286 C15orf32Q32M92 178 aa14.34□□□□□ -0.11
CCDC43-201ENST00000315286 VN1R17PQ8TDU5 208 aa14.34□□□□□ -0.11
CCDC43-201ENST00000315286 CHRDL1Q9BU40 450 aa14.34□□□□□ -0.11
CCDC43-201ENST00000315286 RPH3ALQ9UNE2 315 aa14.34□□□□□ -0.11
CCDC43-201ENST00000315286 HOXA5P20719 270 aa14.34□□□□□ -0.11
CCDC43-201ENST00000315286 KRTAP10-9P60411 292 aa14.34□□□□□ -0.11
CCDC43-201ENST00000315286 RHOGP84095 191 aa14.34□□□□□ -0.11
CCDC43-201ENST00000315286 BAGE2Q86Y30 109 aa14.34□□□□□ -0.11
CCDC43-201ENST00000315286 BPIFA4PQ86YQ2 179 aa14.34□□□□□ -0.11
CCDC43-201ENST00000315286 C5orf17Q8NAS9 161 aa14.34□□□□□ -0.11
CCDC43-201ENST00000315286 SGK494Q96LW2 274 aa14.34□□□□□ -0.11
CCDC43-201ENST00000315286 TXN2Q99757 166 aa14.34□□□□□ -0.11
CCDC43-201ENST00000315286 OSTCQ9NRP0 149 aa14.34□□□□□ -0.11
CCDC43-201ENST00000315286 TRBV9A0A0B4J1U6 114 aa14.33□□□□□ -0.12
CCDC43-201ENST00000315286 ZNF98A6NK75 572 aa14.33□□□□□ -0.12
CCDC43-201ENST00000315286 ADMP35318 185 aa14.33□□□□□ -0.12
CCDC43-201ENST00000315286 TMEM183BQ1AE95 376 aa14.33□□□□□ -0.12
CCDC43-201ENST00000315286 ZNF502Q8TBZ5 544 aa14.32□□□□□ -0.12
CCDC43-201ENST00000315286 C17orf77Q96MU5 243 aa14.32□□□□□ -0.12
CCDC43-201ENST00000315286 ATG101Q9BSB4 218 aa14.32□□□□□ -0.12
CCDC43-201ENST00000315286 KLF12Q9Y4X4 402 aa14.32□□□□□ -0.12
CCDC43-201ENST00000315286 A0A096LNT2 108 aa14.32□□□□□ -0.12
CCDC43-201ENST00000315286 TRAV20A0A0B4J274 112 aa14.32□□□□□ -0.12
CCDC43-201ENST00000315286 MRPS12O15235 138 aaKnown RBP14.32□□□□□ -0.12
CCDC43-201ENST00000315286 IGLC2P0DOY2 106 aa14.32□□□□□ -0.12
CCDC43-201ENST00000315286 LY6EQ16553 131 aa14.32□□□□□ -0.12
CCDC43-201ENST00000315286 EXOC3-AS1Q8N2X6 119 aa14.32□□□□□ -0.12
CCDC43-201ENST00000315286 BTF3L4Q96K17 158 aa14.32□□□□□ -0.12
CCDC43-201ENST00000315286 OTORQ9NRC9 128 aa14.32□□□□□ -0.12
CCDC43-201ENST00000315286 ABCA12Q86UK0 2595 aa14.31□□□□□ -0.12
CCDC43-201ENST00000315286 H3BUX3 64 aa14.31□□□□□ -0.12
CCDC43-201ENST00000315286 TCRAP04437 139 aa14.31□□□□□ -0.12
CCDC43-201ENST00000315286 UBE2G1P62253 170 aa14.31□□□□□ -0.12
CCDC43-201ENST00000315286 ACTL10Q5JWF8 245 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms