RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 TRAV34A0A0B4J273 112 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 FNDC10F2Z333 226 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 PRTN3P24158 256 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 TCL1AP56279 114 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 SELENOTP62341 195 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 PPP1R14DQ9NXH3 145 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 IGHV3OR16-10A0A075B7F0 116 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 GGTLC3B5MD39 225 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 FSTL3O95633 263 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 EAF1Q96JC9 268 aaPredicted RBP9.88□□□□□ -0.83
RNF4-201ENST00000314289 LINC00479Q96M42 142 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 SLC25A2Q9BXI2 301 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 NAT8BQ9UHF3 227 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 CBY1Q9Y3M2 126 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 TCRBV4S1A1TA0A5B7 111 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 DIRC3C9JPN6 131 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 RBP4P02753 201 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 PCP4P48539 62 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 AMTP48728 403 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 UBE2L3P68036 154 aaKnown RBP9.87□□□□□ -0.83
RNF4-201ENST00000314289 C10orf113Q5VZT2 155 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 KIR3DL3Q8N743 410 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 NHLRC2Q8NBF2 726 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 OR11H6Q8NGC7 330 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 CFHR4Q92496 578 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 WNT10AQ9GZT5 417 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 GNB4Q9HAV0 340 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 TBL2Q9Y4P3 447 aaKnown RBP9.87□□□□□ -0.83
RNF4-201ENST00000314289 PSMB11A5LHX3 300 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 GAGE1Q13065 139 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 FXYD3Q14802 87 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 RPEL1Q2QD12 228 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 TMEM249Q2WGJ8 235 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 LINC00305Q7Z4B0 112 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 SGK494Q96LW2 274 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 ZNF586Q9NXT0 402 aa9.87□□□□□ -0.83
RNF4-201ENST00000314289 INS-IGF2F8WCM5 200 aa9.86□□□□□ -0.83
RNF4-201ENST00000314289 C8orf88P0DMB2 117 aa9.86□□□□□ -0.83
RNF4-201ENST00000314289 EFNA4P52798 201 aa9.86□□□□□ -0.83
RNF4-201ENST00000314289 SPATA45Q537H7 98 aa9.86□□□□□ -0.83
RNF4-201ENST00000314289 BLNKQ8WV28 456 aa9.86□□□□□ -0.83
RNF4-201ENST00000314289 FAM167A-AS1Q96KT0 104 aa9.86□□□□□ -0.83
RNF4-201ENST00000314289 PTPN13Q12923 2485 aa9.86□□□□□ -0.83
RNF4-201ENST00000314289 NBR2O15453 112 aa9.86□□□□□ -0.83
RNF4-201ENST00000314289 ATP5IP56385 69 aaPredicted RBP9.86□□□□□ -0.83
RNF4-201ENST00000314289 COL5A1-AS1Q5SY13 56 aa9.86□□□□□ -0.83
RNF4-201ENST00000314289 NRGNQ92686 78 aa9.86□□□□□ -0.83
RNF4-201ENST00000314289 HOXB4P17483 251 aaPredicted RBP9.86□□□□□ -0.83
RNF4-201ENST00000314289 ATOH7Q8N100 152 aa9.86□□□□□ -0.83
RNF4-201ENST00000314289 RCHY1Q96PM5 261 aa9.86□□□□□ -0.83
RNF4-201ENST00000314289 TXN2Q99757 166 aa9.86□□□□□ -0.83
RNF4-201ENST00000314289 F11RQ9Y624 299 aaKnown RBP9.86□□□□□ -0.83
RNF4-201ENST00000314289 SH2D7A6NKC9 451 aaPredicted RBP9.85□□□□□ -0.83
RNF4-201ENST00000314289 M0R1W7 72 aa9.85□□□□□ -0.83
RNF4-201ENST00000314289 LINC00614P0C842 121 aa9.85□□□□□ -0.83
RNF4-201ENST00000314289 FAM120AOSQ5T036 256 aa9.85□□□□□ -0.83
RNF4-201ENST00000314289 RNASE7Q9H1E1 156 aaKnown RBP9.85□□□□□ -0.83
RNF4-201ENST00000314289 ODF3BA8MYP8 253 aa9.85□□□□□ -0.83
RNF4-201ENST00000314289 IGHV3-23P01764 117 aa9.85□□□□□ -0.83
RNF4-201ENST00000314289 IGHV4-39P01824 125 aa9.85□□□□□ -0.83
RNF4-201ENST00000314289 CEACAM3P40198 252 aa9.85□□□□□ -0.83
RNF4-201ENST00000314289 TAS2R45P59539 299 aa9.85□□□□□ -0.83
RNF4-201ENST00000314289 PQLC2Q6ZP29 291 aa9.85□□□□□ -0.83
RNF4-201ENST00000314289 RPH3ALQ9UNE2 315 aa9.85□□□□□ -0.83
RNF4-201ENST00000314289 TOX4O94842 621 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 NTF3P20783 257 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 MRPL54Q6P161 138 aaKnown RBP9.84□□□□□ -0.83
RNF4-201ENST00000314289 Q6ZN92 141 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 FAM19A2Q8N3H0 131 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 OR4B1Q8NGF8 309 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 NRN1Q9NPD7 142 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 TMEM167BQ9NRX6 74 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 FBN2P35556 2912 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 GPX1P07203 203 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 LYZP61626 148 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 NDPQ00604 133 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 MRPL52Q86TS9 123 aaKnown RBP9.84□□□□□ -0.83
RNF4-201ENST00000314289 PAXXQ9BUH6 204 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 ZNF253O75346 499 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 ESDP10768 282 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 LMO4P61968 165 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 GNG5P63218 68 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 TIGITQ495A1 244 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 CENPWQ5EE01 88 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 Q6ZVH6 145 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 STPG4Q8N801 248 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 THAP8Q8NA92 274 aa9.84□□□□□ -0.83
RNF4-201ENST00000314289 ANKRD17O75179 2603 aaKnown RBP9.83□□□□□ -0.84
RNF4-201ENST00000314289 HELTA6NFD8 242 aa9.83□□□□□ -0.84
RNF4-201ENST00000314289 CRYGCP07315 174 aa9.83□□□□□ -0.84
RNF4-201ENST00000314289 GNG4P50150 75 aa9.83□□□□□ -0.84
RNF4-201ENST00000314289 HNRNPA3P51991 378 aaKnown RBP9.83□□□□□ -0.84
RNF4-201ENST00000314289 C22orf15Q8WYQ4 148 aa9.83□□□□□ -0.84
RNF4-201ENST00000314289 RNF2Q99496 336 aa9.83□□□□□ -0.84
RNF4-201ENST00000314289 TXNDC17Q9BRA2 123 aa9.83□□□□□ -0.84
RNF4-201ENST00000314289 SERTAD4Q9NUC0 356 aa9.83□□□□□ -0.84
RNF4-201ENST00000314289 V9GYV3 84 aa9.83□□□□□ -0.84
RNF4-201ENST00000314289 PSG1P11464 419 aa9.83□□□□□ -0.84
RNF4-201ENST00000314289 SRIP30626 198 aa9.83□□□□□ -0.84
RNF4-201ENST00000314289 CX3CL1P78423 397 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms