RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 GDF5OSQ5U4N7 250 aa10.61□□□□□ -0.71
PPP1CA-201ENST00000312989 STHQ8IWL8 128 aa10.61□□□□□ -0.71
PPP1CA-201ENST00000312989 ZNF431Q8TF32 576 aaPredicted RBP10.61□□□□□ -0.71
PPP1CA-201ENST00000312989 RARRES2Q99969 163 aa10.61□□□□□ -0.71
PPP1CA-201ENST00000312989 C11orf68Q9H3H3 251 aaKnown RBP10.61□□□□□ -0.71
PPP1CA-201ENST00000312989 X6R8D5 127 aa10.61□□□□□ -0.71
PPP1CA-201ENST00000312989 BIRC6Q9NR09 4857 aa10.6□□□□□ -0.71
PPP1CA-201ENST00000312989 ZNF705EA8MWA4 302 aaPredicted RBP10.6□□□□□ -0.71
PPP1CA-201ENST00000312989 H3BMM0 161 aa10.6□□□□□ -0.71
PPP1CA-201ENST00000312989 TSC22D2O75157 780 aa10.6□□□□□ -0.71
PPP1CA-201ENST00000312989 TAS2R30P59541 319 aa10.6□□□□□ -0.71
PPP1CA-201ENST00000312989 ASAH1Q13510 395 aa10.6□□□□□ -0.71
PPP1CA-201ENST00000312989 OR11H2Q8NH07 326 aa10.6□□□□□ -0.71
PPP1CA-201ENST00000312989 SLC25A32Q9H2D1 315 aa10.6□□□□□ -0.71
PPP1CA-201ENST00000312989 SLC45A2Q9UMX9 530 aa10.6□□□□□ -0.71
PPP1CA-201ENST00000312989 K7EPK0 472 aa10.59□□□□□ -0.71
PPP1CA-201ENST00000312989 FABP1P07148 127 aa10.59□□□□□ -0.71
PPP1CA-201ENST00000312989 METTL15P1P0C7V9 234 aa10.59□□□□□ -0.71
PPP1CA-201ENST00000312989 SPP1P10451 314 aa10.59□□□□□ -0.71
PPP1CA-201ENST00000312989 NUP62P37198 522 aaPredicted RBP10.59□□□□□ -0.71
PPP1CA-201ENST00000312989 DLK1P80370 383 aa10.59□□□□□ -0.71
PPP1CA-201ENST00000312989 ZNF98A6NK75 572 aa10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 FNDC10F2Z333 226 aa10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 H3BRN7 92 aa10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 SCGB1D2O95969 90 aa10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 CFDP00746 253 aaPredicted RBP10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 RBMY1A1P0DJD3 496 aaKnown RBP10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 RBMY1CP0DJD4 496 aa10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 HLA-DRB4P13762 266 aa10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 PLP1P60201 277 aa10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 AKR1C1Q04828 323 aa10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 PMS2P11Q13670 270 aa10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 RBMY1FQ15415 496 aaKnown RBP10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 MORN3Q6PF18 240 aaPredicted RBP10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 CYP2G1PQ6ZSU1 146 aa10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 C20orf173Q96LM9 149 aa10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 PTTG2Q9NZH5 202 aa10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 HLA-DRB4X5D2U9 266 aa10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 DNAH6Q9C0G6 4158 aa10.58□□□□□ -0.72
PPP1CA-201ENST00000312989 DEFB4AO15263 64 aa10.57□□□□□ -0.72
PPP1CA-201ENST00000312989 H2AFB2P0C5Z0 115 aa10.57□□□□□ -0.72
PPP1CA-201ENST00000312989 PSMB3P49720 205 aa10.57□□□□□ -0.72
PPP1CA-201ENST00000312989 RRAS2P62070 204 aaPredicted RBP10.57□□□□□ -0.72
PPP1CA-201ENST00000312989 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.57□□□□□ -0.72
PPP1CA-201ENST00000312989 PATE2Q6UY27 113 aa10.57□□□□□ -0.72
PPP1CA-201ENST00000312989 S100ZQ8WXG8 99 aa10.57□□□□□ -0.72
PPP1CA-201ENST00000312989 SCRT1Q9BWW7 348 aa10.57□□□□□ -0.72
PPP1CA-201ENST00000312989 CLEC5AQ9NY25 188 aa10.57□□□□□ -0.72
PPP1CA-201ENST00000312989 GSKIPQ9P0R6 139 aa10.57□□□□□ -0.72
PPP1CA-201ENST00000312989 FBXL17Q9UF56 701 aa10.57□□□□□ -0.72
PPP1CA-201ENST00000312989 AGRNO00468 2067 aa10.57□□□□□ -0.72
PPP1CA-201ENST00000312989 DNAH10Q8IVF4 4471 aa10.57□□□□□ -0.72
PPP1CA-201ENST00000312989 TRAV8-2A0A0B4J237 113 aa10.56□□□□□ -0.72
PPP1CA-201ENST00000312989 UPK1BO75841 260 aa10.56□□□□□ -0.72
PPP1CA-201ENST00000312989 SNRPD3P62318 126 aaKnown RBP10.56□□□□□ -0.72
PPP1CA-201ENST00000312989 TMEM41BQ5BJD5 291 aa10.56□□□□□ -0.72
PPP1CA-201ENST00000312989 CEMP1Q6PRD7 247 aaPredicted RBP10.56□□□□□ -0.72
PPP1CA-201ENST00000312989 C12orf45Q8N5I9 185 aaPredicted RBP10.56□□□□□ -0.72
PPP1CA-201ENST00000312989 ZNF709Q8N972 641 aa10.56□□□□□ -0.72
PPP1CA-201ENST00000312989 BPIFCQ8NFQ6 507 aa10.56□□□□□ -0.72
PPP1CA-201ENST00000312989 SAV1Q9H4B6 383 aaPredicted RBP10.56□□□□□ -0.72
PPP1CA-201ENST00000312989 IGHV4-28A0A0C4DH34 117 aa10.55□□□□□ -0.72
PPP1CA-201ENST00000312989 CXorf65A6NEN9 183 aa10.55□□□□□ -0.72
PPP1CA-201ENST00000312989 A8MTW9 85 aa10.55□□□□□ -0.72
PPP1CA-201ENST00000312989 MRPS12O15235 138 aaKnown RBP10.55□□□□□ -0.72
PPP1CA-201ENST00000312989 IL5P05113 134 aa10.55□□□□□ -0.72
PPP1CA-201ENST00000312989 ORM2P19652 201 aa10.55□□□□□ -0.72
PPP1CA-201ENST00000312989 SLC38A11Q08AI6 406 aa10.55□□□□□ -0.72
PPP1CA-201ENST00000312989 OR8I2Q8N0Y5 310 aa10.55□□□□□ -0.72
PPP1CA-201ENST00000312989 CLUHP3Q96NS8 147 aa10.55□□□□□ -0.72
PPP1CA-201ENST00000312989 SHANK2-AS3Q9BTD1 123 aa10.55□□□□□ -0.72
PPP1CA-201ENST00000312989 SLC25A39Q9BZJ4 359 aaPredicted RBP10.55□□□□□ -0.72
PPP1CA-201ENST00000312989 ELOA3CA0A087WX78 387 aaPredicted RBP10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 FAM240BA0A1B0GVZ2 78 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 SMCO3A2RU48 225 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 NUPR2A6NF83 97 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 F6UB75 175 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 ISLRO14498 428 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 LINC00869P0C866 280 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 NANOS2P60321 138 aaKnown RBP10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 FOXI2Q6ZQN5 318 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 OR10P1Q8NGE3 313 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 OR1B1Q8NGR6 318 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 LINC00476Q8WZB0 136 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 C2orf50Q96LR7 162 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 UHRF2Q96PU4 802 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 MGST2Q99735 147 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 GGACTQ9BVM4 153 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 NPVFQ9HCQ7 196 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 DOK5Q9P104 306 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 PFDN2Q9UHV9 154 aa10.54□□□□□ -0.72
PPP1CA-201ENST00000312989 DEDDO75618 318 aa10.53□□□□□ -0.72
PPP1CA-201ENST00000312989 ZNF846Q147U1 533 aa10.53□□□□□ -0.72
PPP1CA-201ENST00000312989 ZNF705AQ6ZN79 300 aaPredicted RBP10.53□□□□□ -0.72
PPP1CA-201ENST00000312989 TMEM217Q8N7C4 229 aa10.53□□□□□ -0.72
PPP1CA-201ENST00000312989 PHLDA1Q8WV24 401 aaPredicted RBP10.53□□□□□ -0.72
PPP1CA-201ENST00000312989 TMEM147Q9BVK8 224 aa10.53□□□□□ -0.72
PPP1CA-201ENST00000312989 SLC25A22Q9H936 323 aa10.53□□□□□ -0.72
PPP1CA-201ENST00000312989 LSM5Q9Y4Y9 91 aaKnown RBP10.53□□□□□ -0.72
PPP1CA-201ENST00000312989 A0A0J9YX75 114 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms