RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TMEM238C9JI98 176 aa6.76□□□□□ -1.33
VPS41-202ENST00000310301 D6R8Y8 96 aa6.76□□□□□ -1.33
VPS41-202ENST00000310301 ADCYAP1P18509 176 aa6.76□□□□□ -1.33
VPS41-202ENST00000310301 KLF17Q5JT82 389 aaPredicted RBP6.76□□□□□ -1.33
VPS41-202ENST00000310301 FAM90A2PQ658T7 463 aa6.76□□□□□ -1.33
VPS41-202ENST00000310301 GFI1Q99684 422 aa6.76□□□□□ -1.33
VPS41-202ENST00000310301 SEPSECSQ9HD40 501 aaKnown RBP6.76□□□□□ -1.33
VPS41-202ENST00000310301 PINLYPA6NC86 204 aa6.76□□□□□ -1.33
VPS41-202ENST00000310301 C17orf100A8MU93 164 aa6.76□□□□□ -1.33
VPS41-202ENST00000310301 NCR2O95944 276 aa6.76□□□□□ -1.33
VPS41-202ENST00000310301 PRB4P10163 310 aaPredicted RBP6.76□□□□□ -1.33
VPS41-202ENST00000310301 IGFL2Q6UWQ7 119 aa6.76□□□□□ -1.33
VPS41-202ENST00000310301 RFNGQ9Y644 331 aa6.76□□□□□ -1.33
VPS41-202ENST00000310301 CD7P09564 240 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 GLMPQ8WWB7 406 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 MCRIP2Q9BUT9 160 aaKnown RBP6.75□□□□□ -1.33
VPS41-202ENST00000310301 KLF12Q9Y4X4 402 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 OTOGLQ3ZCN5 2332 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 A0A0A6YYD4 124 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 TCRBV4S1A1TA0A5B7 111 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 FAM231BA6NCW3 169 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 C15orf61A6NNL5 157 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 UPK2O00526 184 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 RASL11AQ6T310 242 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 CLEC19AQ6UXS0 136 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 GATD1Q8NB37 220 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 SCRT1Q9BWW7 348 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 TRAV1-1A0A0B4J248 108 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 TMEM42Q69YG0 159 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 TSSC4Q9Y5U2 329 aaPredicted RBP6.75□□□□□ -1.33
VPS41-202ENST00000310301 TSC2P49815 1807 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 ARHGEF17Q96PE2 2063 aaPredicted RBP6.75□□□□□ -1.33
VPS41-202ENST00000310301 C3orf56Q8N813 242 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 AGMATQ9BSE5 352 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 IGKV1D-33P01593 117 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 IGKV1-33P01594 117 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 GATA3P23771 443 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 LCNL1Q6ZST4 164 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 FAM89BQ8N5H3 189 aa6.75□□□□□ -1.33
VPS41-202ENST00000310301 MLNRO43193 412 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 IGHV2-70P01814 119 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 MALP21145 153 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 SPATA31B1PQ5VZV4 182 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 RPRMLQ8N4K4 120 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 PIKFYVEQ9Y2I7 2098 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 IGHV3OR16-10A0A075B7F0 116 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 IGKV1D-8A0A087WSZ0 117 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 TRAV8-3A0A0A6YYJ7 113 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 C9JAW5 83 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 TOMM40O96008 361 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 OR9G9P0C7N8 305 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 HGFACQ04756 655 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 LINC01559Q495D7 138 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 PPP1R27Q86WC6 154 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 PAQR4Q8N4S7 273 aaPredicted RBP6.74□□□□□ -1.33
VPS41-202ENST00000310301 LINC01587Q99440 93 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 CHAC1Q9BUX1 264 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 WDR83OSQ9Y284 106 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 NPIPB5A8MRT5 1133 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 F2Z2F3 143 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 J3QRE1 110 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 CEACAM8P31997 349 aaPredicted RBP6.74□□□□□ -1.33
VPS41-202ENST00000310301 FAM201AQ5SY85 155 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 ZNF843Q8N446 348 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 ARPC1AQ92747 370 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 SPANXA1Q9NS26 97 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 SAA2-SAA4A0A096LPE2 208 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 SAA2P0DJI9 122 aaPredicted RBP6.74□□□□□ -1.33
VPS41-202ENST00000310301 CCL1P22362 96 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 GAGE2AQ6NT46 116 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 LINC01356Q8N9X3 169 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 NUP35Q8NFH5 326 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 MRPL27Q9P0M9 148 aaKnown RBP6.74□□□□□ -1.33
VPS41-202ENST00000310301 ABCA4P78363 2273 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 SPTBP11277 2137 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 LINC00158P58513 81 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 LINC00114Q6XXX2 140 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 SLC25A48Q6ZT89 311 aaKnown RBP6.74□□□□□ -1.33
VPS41-202ENST00000310301 ITLN2Q8WWU7 325 aaPredicted RBP6.74□□□□□ -1.33
VPS41-202ENST00000310301 ZNF319Q9P2F9 582 aa6.74□□□□□ -1.33
VPS41-202ENST00000310301 ATP6V0BQ99437 205 aa6.73□□□□□ -1.33
VPS41-202ENST00000310301 C1QTNF5Q9BXJ0 243 aa6.73□□□□□ -1.33
VPS41-202ENST00000310301 FAM216BQ8N7L0 139 aa6.73□□□□□ -1.33
VPS41-202ENST00000310301 C20orf144Q9BQM9 153 aa6.73□□□□□ -1.33
VPS41-202ENST00000310301 FBLN5Q9UBX5 448 aa6.73□□□□□ -1.33
VPS41-202ENST00000310301 PRR32B1ATL7 298 aa6.73□□□□□ -1.33
VPS41-202ENST00000310301 ZNF138P52744 262 aa6.73□□□□□ -1.33
VPS41-202ENST00000310301 ZNF672Q499Z4 452 aaPredicted RBP6.73□□□□□ -1.33
VPS41-202ENST00000310301 MORN3Q6PF18 240 aaPredicted RBP6.73□□□□□ -1.33
VPS41-202ENST00000310301 TREML4Q6UXN2 200 aa6.73□□□□□ -1.33
VPS41-202ENST00000310301 RNF125Q96EQ8 232 aa6.73□□□□□ -1.33
VPS41-202ENST00000310301 LYZL4Q96KX0 146 aa6.73□□□□□ -1.33
VPS41-202ENST00000310301 SUPT4H1P63272 117 aaKnown RBP6.73□□□□□ -1.33
VPS41-202ENST00000310301 FOXF2Q12947 444 aa6.73□□□□□ -1.33
VPS41-202ENST00000310301 CENPVQ7Z7K6 275 aaPredicted RBP6.73□□□□□ -1.33
VPS41-202ENST00000310301 IGKV1-9A0A0C4DH69 117 aa6.72□□□□□ -1.33
VPS41-202ENST00000310301 CRPP02741 224 aa6.72□□□□□ -1.33
VPS41-202ENST00000310301 PVRIGQ6DKI7 326 aa6.72□□□□□ -1.33
VPS41-202ENST00000310301 SLC50A1Q9BRV3 221 aa6.72□□□□□ -1.33
VPS41-202ENST00000310301 ITGB1BP1O14713 200 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms