RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 MDFIC2A0A1B0GVS7 189 aa16.62■□□□□ 0.25
ATG4D-201ENST00000309469 OR2T8A6NH00 312 aa16.62■□□□□ 0.25
ATG4D-201ENST00000309469 HNF1AP20823 631 aa16.62■□□□□ 0.25
ATG4D-201ENST00000309469 SRP14P37108 136 aaKnown RBP16.62■□□□□ 0.25
ATG4D-201ENST00000309469 RHOGP84095 191 aa16.62■□□□□ 0.25
ATG4D-201ENST00000309469 SFRP2Q96HF1 295 aa16.62■□□□□ 0.25
ATG4D-201ENST00000309469 PYGO2Q9BRQ0 406 aa16.62■□□□□ 0.25
ATG4D-201ENST00000309469 CELSR2Q9HCU4 2923 aa16.62■□□□□ 0.25
ATG4D-201ENST00000309469 H3BRN7 92 aa16.61■□□□□ 0.25
ATG4D-201ENST00000309469 SCGB2A1O75556 95 aa16.61■□□□□ 0.25
ATG4D-201ENST00000309469 TRGC2P03986 189 aa16.61■□□□□ 0.25
ATG4D-201ENST00000309469 CTSGP08311 255 aa16.61■□□□□ 0.25
ATG4D-201ENST00000309469 PLA2G2AP14555 144 aa16.61■□□□□ 0.25
ATG4D-201ENST00000309469 GNG4P50150 75 aa16.61■□□□□ 0.25
ATG4D-201ENST00000309469 C15orf32Q32M92 178 aa16.61■□□□□ 0.25
ATG4D-201ENST00000309469 CENPWQ5EE01 88 aa16.61■□□□□ 0.25
ATG4D-201ENST00000309469 ZNF600Q6ZNG1 722 aa16.61■□□□□ 0.25
ATG4D-201ENST00000309469 UBE2CO00762 179 aa16.6■□□□□ 0.25
ATG4D-201ENST00000309469 Q5PR19 223 aa16.6■□□□□ 0.25
ATG4D-201ENST00000309469 TCEAL7Q9BRU2 100 aa16.6■□□□□ 0.25
ATG4D-201ENST00000309469 K7EN84 100 aa16.6■□□□□ 0.25
ATG4D-201ENST00000309469 AP4M1O00189 453 aa16.6■□□□□ 0.25
ATG4D-201ENST00000309469 CRIP2P52943 208 aaPredicted RBP16.6■□□□□ 0.25
ATG4D-201ENST00000309469 USF2Q15853 346 aaPredicted RBP16.6■□□□□ 0.25
ATG4D-201ENST00000309469 KCNIP4Q6PIL6 250 aa16.6■□□□□ 0.25
ATG4D-201ENST00000309469 ZNF502Q8TBZ5 544 aa16.6■□□□□ 0.25
ATG4D-201ENST00000309469 TRAV41A0A0B4J266 112 aa16.59■□□□□ 0.25
ATG4D-201ENST00000309469 PGPA6NDG6 321 aa16.59■□□□□ 0.25
ATG4D-201ENST00000309469 HIST1H1EP10412 219 aaKnown RBP16.59■□□□□ 0.25
ATG4D-201ENST00000309469 C19orf54Q5BKX5 351 aa16.59■□□□□ 0.25
ATG4D-201ENST00000309469 C9orf152Q5JTZ5 239 aa16.59■□□□□ 0.25
ATG4D-201ENST00000309469 S100A7AQ86SG5 101 aa16.59■□□□□ 0.25
ATG4D-201ENST00000309469 PITPNC1Q9UKF7 332 aa16.59■□□□□ 0.25
ATG4D-201ENST00000309469 A0A1W2PPQ1 181 aa16.58■□□□□ 0.25
ATG4D-201ENST00000309469 J3QKU1 62 aa16.58■□□□□ 0.25
ATG4D-201ENST00000309469 PEX7O00628 323 aa16.58■□□□□ 0.25
ATG4D-201ENST00000309469 IGHV4-31P0DP07 118 aa16.58■□□□□ 0.25
ATG4D-201ENST00000309469 S100A12P80511 92 aa16.58■□□□□ 0.25
ATG4D-201ENST00000309469 FABP9Q0Z7S8 132 aa16.58■□□□□ 0.25
ATG4D-201ENST00000309469 TEX38Q6PEX7 206 aa16.58■□□□□ 0.25
ATG4D-201ENST00000309469 CHRDL1Q9BU40 450 aa16.58■□□□□ 0.25
ATG4D-201ENST00000309469 ABCA1O95477 2261 aa16.58■□□□□ 0.24
ATG4D-201ENST00000309469 M0QZK8 103 aa16.58■□□□□ 0.24
ATG4D-201ENST00000309469 ADMP35318 185 aa16.58■□□□□ 0.24
ATG4D-201ENST00000309469 TAS2R60P59551 318 aa16.58■□□□□ 0.24
ATG4D-201ENST00000309469 BPIFA4PQ86YQ2 179 aa16.58■□□□□ 0.24
ATG4D-201ENST00000309469 MS4A10Q96PG2 267 aa16.58■□□□□ 0.24
ATG4D-201ENST00000309469 SRD5A3Q9H8P0 318 aa16.58■□□□□ 0.24
ATG4D-201ENST00000309469 ZNF586Q9NXT0 402 aa16.58■□□□□ 0.24
ATG4D-201ENST00000309469 EPDR1Q9UM22 224 aa16.58■□□□□ 0.24
ATG4D-201ENST00000309469 H3BTX0 84 aa16.57■□□□□ 0.24
ATG4D-201ENST00000309469 GGCTO75223 188 aaKnown RBP16.57■□□□□ 0.24
ATG4D-201ENST00000309469 CNN1P51911 297 aaKnown RBP16.57■□□□□ 0.24
ATG4D-201ENST00000309469 BCL6BQ8N143 479 aaPredicted RBP16.57■□□□□ 0.24
ATG4D-201ENST00000309469 OR10G8Q8NGN5 311 aa16.57■□□□□ 0.24
ATG4D-201ENST00000309469 IGF2BP2-AS1Q96M15 143 aa16.57■□□□□ 0.24
ATG4D-201ENST00000309469 LINC00479Q96M42 142 aa16.57■□□□□ 0.24
ATG4D-201ENST00000309469 IMMP2LQ96T52 175 aa16.57■□□□□ 0.24
ATG4D-201ENST00000309469 CDC42EP3Q9UKI2 254 aa16.57■□□□□ 0.24
ATG4D-201ENST00000309469 PPP5D1E7EU14 171 aa16.57■□□□□ 0.24
ATG4D-201ENST00000309469 IGF1P05019 195 aa16.57■□□□□ 0.24
ATG4D-201ENST00000309469 SLC25A5P05141 298 aaKnown RBP16.57■□□□□ 0.24
ATG4D-201ENST00000309469 MBD6Q96DN6 1003 aa16.57■□□□□ 0.24
ATG4D-201ENST00000309469 Q9H3A6 140 aa16.57■□□□□ 0.24
ATG4D-201ENST00000309469 LINC00527Q9UJ94 153 aa16.57■□□□□ 0.24
ATG4D-201ENST00000309469 USP9YO00507 2555 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-201ENST00000309469 KMT2BQ9UMN6 2715 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-201ENST00000309469 HIST1H2BKO60814 126 aa16.56■□□□□ 0.24
ATG4D-201ENST00000309469 CLEC3BP05452 202 aa16.56■□□□□ 0.24
ATG4D-201ENST00000309469 HIST1H2BJP06899 126 aa16.56■□□□□ 0.24
ATG4D-201ENST00000309469 HIST1H2BOP23527 126 aa16.56■□□□□ 0.24
ATG4D-201ENST00000309469 GPR183P32249 361 aa16.56■□□□□ 0.24
ATG4D-201ENST00000309469 HIST1H2BBP33778 126 aa16.56■□□□□ 0.24
ATG4D-201ENST00000309469 HIST1H2BDP58876 126 aa16.56■□□□□ 0.24
ATG4D-201ENST00000309469 HIST1H2BCP62807 126 aa16.56■□□□□ 0.24
ATG4D-201ENST00000309469 GNG5P63218 68 aa16.56■□□□□ 0.24
ATG4D-201ENST00000309469 HIST2H2BEQ16778 126 aa16.56■□□□□ 0.24
ATG4D-201ENST00000309469 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-201ENST00000309469 HIST1H2BHQ93079 126 aa16.56■□□□□ 0.24
ATG4D-201ENST00000309469 HIST1H2BNQ99877 126 aa16.56■□□□□ 0.24
ATG4D-201ENST00000309469 HIST1H2BMQ99879 126 aa16.56■□□□□ 0.24
ATG4D-201ENST00000309469 GAR1Q9NY12 217 aaKnown RBP16.56■□□□□ 0.24
ATG4D-201ENST00000309469 RNF24Q9Y225 148 aa16.56■□□□□ 0.24
ATG4D-201ENST00000309469 ANKRD17O75179 2603 aaKnown RBP16.56■□□□□ 0.24
ATG4D-201ENST00000309469 IGLV2-8P01709 118 aa16.55■□□□□ 0.24
ATG4D-201ENST00000309469 IGHG2P01859 326 aa16.55■□□□□ 0.24
ATG4D-201ENST00000309469 CTAG1AP78358 180 aa16.55■□□□□ 0.24
ATG4D-201ENST00000309469 OR4F17Q8NGA8 305 aa16.55■□□□□ 0.24
ATG4D-201ENST00000309469 EEF1AKMT3Q96AZ1 226 aa16.55■□□□□ 0.24
ATG4D-201ENST00000309469 C12orf57Q99622 126 aa16.55■□□□□ 0.24
ATG4D-201ENST00000309469 CSMD1Q96PZ7 3565 aa16.55■□□□□ 0.24
ATG4D-201ENST00000309469 CSMD2Q7Z408 3487 aa16.55■□□□□ 0.24
ATG4D-201ENST00000309469 OR5I1Q13606 314 aa16.55■□□□□ 0.24
ATG4D-201ENST00000309469 DEFB112Q30KQ8 113 aa16.55■□□□□ 0.24
ATG4D-201ENST00000309469 C5orf17Q8NAS9 161 aa16.55■□□□□ 0.24
ATG4D-201ENST00000309469 FRZBQ92765 325 aa16.55■□□□□ 0.24
ATG4D-201ENST00000309469 Q96MF0 132 aa16.55■□□□□ 0.24
ATG4D-201ENST00000309469 MAP1AP78559 2803 aaPredicted RBP16.54■□□□□ 0.24
ATG4D-201ENST00000309469 CENPEQ02224 2701 aa16.54■□□□□ 0.24
ATG4D-201ENST00000309469 TRBV7-1A0A0A6YYK4 115 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms