RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 PAX8Q06710 450 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 Q0VFX4 171 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 TWIST1Q15672 202 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 CEND1Q8N111 149 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 RFESDQ8TAC1 157 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 PHLDA1Q8WV24 401 aaPredicted RBP4.32□□□□□ -1.72
USP8-201ENST00000307179 PRELID3AQ96N28 172 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 SRSF8Q9BRL6 282 aaKnown RBP4.32□□□□□ -1.72
USP8-201ENST00000307179 CHAC1Q9BUX1 264 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 HINT2Q9BX68 163 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 IGKV1D-37A0A075B6S9 117 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 A0A1B0GWB2 263 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 EPOPA6NHQ4 379 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 H3BMG7 143 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 RAB9AP51151 201 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 MEF2CQ06413 473 aaPredicted RBP4.32□□□□□ -1.72
USP8-201ENST00000307179 EDDM3AQ14507 147 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 FAM104BQ5XKR9 115 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 Q6ZT83 130 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 LINC00311Q8N616 119 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 NXT2Q9NPJ8 142 aaKnown RBP4.32□□□□□ -1.72
USP8-201ENST00000307179 DKK4Q9UBT3 224 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 RPUSD1Q9UJJ7 312 aaKnown RBP4.32□□□□□ -1.72
USP8-201ENST00000307179 HIGD1AQ9Y241 93 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 TSSC4Q9Y5U2 329 aaPredicted RBP4.32□□□□□ -1.72
USP8-201ENST00000307179 INSIG2Q9Y5U4 225 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 COL27A1Q8IZC6 1860 aaPredicted RBP4.32□□□□□ -1.72
USP8-201ENST00000307179 TRAV5A0A0B4J249 113 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 M0QXV9 152 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 MC5RP33032 325 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 ZNF134P52741 427 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 PDE6HQ13956 83 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 VMA21Q3ZAQ7 101 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 C6orf15Q6UXA7 325 aaPredicted RBP4.32□□□□□ -1.72
USP8-201ENST00000307179 TMEM116Q8NCL8 245 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 LINC00479Q96M42 142 aa4.32□□□□□ -1.72
USP8-201ENST00000307179 PRR33A8MZF0 331 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 LHBP01229 141 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 IGLV1-44P01699 117 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 CACNG7P62955 275 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 GNG5P63218 68 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 ZNF562Q6V9R5 426 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 OR8A1Q8NGG7 326 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 METRNQ9UJH8 293 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 CELSR3Q9NYQ7 3312 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 A0A096LNJ9 63 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 K7EM74 188 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 OVOL3O00110 214 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 KLF17Q5JT82 389 aaPredicted RBP4.31□□□□□ -1.72
USP8-201ENST00000307179 CCDC144NLQ6NUI1 221 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 ZNF826PQ6ZT77 177 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 WFDC8Q8IUA0 241 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 OR4C13Q8NGP0 309 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 SCNM1Q9BWG6 230 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 COLQQ9Y215 455 aaPredicted RBP4.31□□□□□ -1.72
USP8-201ENST00000307179 LINC00312Q9Y6C7 94 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 ZNF785A8K8V0 405 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.31□□□□□ -1.72
USP8-201ENST00000307179 NCR2O95944 276 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 ZNF137PP52743 207 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 GAGE13Q4V321 117 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 BCL6BQ8N143 479 aaPredicted RBP4.31□□□□□ -1.72
USP8-201ENST00000307179 ZNF479Q96JC4 524 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 HARBI1Q96MB7 349 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 C1QTNF4Q9BXJ3 329 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 GTSF1LQ9H1H1 148 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 MAP1LC3AQ9H492 121 aa4.31□□□□□ -1.72
USP8-201ENST00000307179 PRSS47A8MTI9 375 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 IGLL5B9A064 214 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 DPM2O94777 84 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 FCER1GP30273 86 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 FCGR2BP31994 310 aaPredicted RBP4.3□□□□□ -1.72
USP8-201ENST00000307179 SMAGPQ0VAQ4 97 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 LTC4SQ16873 150 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 MORN5Q5VZ52 161 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 FAM53AQ6NSI3 398 aaPredicted RBP4.3□□□□□ -1.72
USP8-201ENST00000307179 HILPDAQ9Y5L2 63 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 RTTNQ86VV8 2226 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 TSPAN13O95857 204 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 IGLV2-11P01706 119 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 IGKCP01834 107 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 IGHV1-2P23083 117 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 MAGEA5P43359 124 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 LINC00205P59089 165 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 ALKBH6Q3KRA9 238 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 NPIPB3Q92617 1050 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 FLYWCH2Q96CP2 140 aaKnown RBP4.3□□□□□ -1.72
USP8-201ENST00000307179 AKIRIN1Q9H9L7 192 aaPredicted RBP4.3□□□□□ -1.72
USP8-201ENST00000307179 TP73-AS1Q9UF72 201 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 TMEM262E9PQX1 116 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 C3AR1Q16581 482 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 RRN3P1Q2M238 152 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 LINC00322Q6ZN03 302 aaPredicted RBP4.3□□□□□ -1.72
USP8-201ENST00000307179 ASCC3Q8N3C0 2202 aaKnown RBP4.3□□□□□ -1.72
USP8-201ENST00000307179 REV3LO60673 3130 aa4.3□□□□□ -1.72
USP8-201ENST00000307179 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.29□□□□□ -1.72
USP8-201ENST00000307179 H0Y8G0 127 aa4.29□□□□□ -1.72
USP8-201ENST00000307179 NDUFS7O75251 213 aa4.29□□□□□ -1.72
USP8-201ENST00000307179 CEACAM4O75871 244 aa4.29□□□□□ -1.72
USP8-201ENST00000307179 ARMS2P0C7Q2 107 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms