RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 GNB4Q9HAV0 340 aa13.59□□□□□ -0.23
KRT28-201ENST00000306658 PUS1Q9Y606 427 aaKnown RBP eCLIP13.59□□□□□ -0.23
KRT28-201ENST00000306658 TRAV5A0A0B4J249 113 aa13.59□□□□□ -0.23
KRT28-201ENST00000306658 F8W036 122 aa13.59□□□□□ -0.23
KRT28-201ENST00000306658 PAGE4O60829 102 aa13.59□□□□□ -0.23
KRT28-201ENST00000306658 CRYBA1P05813 215 aa13.59□□□□□ -0.23
KRT28-201ENST00000306658 MEF2BQ02080 365 aaPredicted RBP13.59□□□□□ -0.23
KRT28-201ENST00000306658 FAM209BQ5JX69 171 aa13.59□□□□□ -0.23
KRT28-201ENST00000306658 SEC11CQ9BY50 192 aa13.59□□□□□ -0.23
KRT28-201ENST00000306658 SLC25A39Q9BZJ4 359 aaPredicted RBP13.59□□□□□ -0.23
KRT28-201ENST00000306658 BAHCC1Q9P281 2608 aa13.59□□□□□ -0.23
KRT28-201ENST00000306658 ANK3Q12955 4377 aaKnown RBP13.58□□□□□ -0.24
KRT28-201ENST00000306658 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.58□□□□□ -0.24
KRT28-201ENST00000306658 RNASE1P07998 156 aaKnown RBP13.58□□□□□ -0.24
KRT28-201ENST00000306658 ELANEP08246 267 aa13.58□□□□□ -0.24
KRT28-201ENST00000306658 S100A7P31151 101 aa13.58□□□□□ -0.24
KRT28-201ENST00000306658 HILS1P60008 231 aa13.58□□□□□ -0.24
KRT28-201ENST00000306658 FOXE3Q13461 319 aa13.58□□□□□ -0.24
KRT28-201ENST00000306658 JMJD8Q96S16 334 aa13.58□□□□□ -0.24
KRT28-201ENST00000306658 TXNDC17Q9BRA2 123 aa13.58□□□□□ -0.24
KRT28-201ENST00000306658 OR51M1Q9H341 326 aa13.58□□□□□ -0.24
KRT28-201ENST00000306658 SERTAD4Q9NUC0 356 aa13.58□□□□□ -0.24
KRT28-201ENST00000306658 BMPR1BO00238 502 aa13.57□□□□□ -0.24
KRT28-201ENST00000306658 ARL3P36405 182 aa13.57□□□□□ -0.24
KRT28-201ENST00000306658 ZNF343Q6P1L6 599 aa13.57□□□□□ -0.24
KRT28-201ENST00000306658 ZNF503Q96F45 646 aa13.57□□□□□ -0.24
KRT28-201ENST00000306658 PAXXQ9BUH6 204 aa13.57□□□□□ -0.24
KRT28-201ENST00000306658 RNF24Q9Y225 148 aa13.57□□□□□ -0.24
KRT28-201ENST00000306658 NDUFS6O75380 124 aaKnown RBP13.56□□□□□ -0.24
KRT28-201ENST00000306658 IGHV3-11P01762 117 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 SRP19P09132 144 aaKnown RBP13.56□□□□□ -0.24
KRT28-201ENST00000306658 UBE2G2P60604 165 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 USF2Q15853 346 aaPredicted RBP13.56□□□□□ -0.24
KRT28-201ENST00000306658 CST9LP1Q5W188 147 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 LCNL1Q6ZST4 164 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 OR4X2Q8NGF9 303 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 SHANK2-AS3Q9BTD1 123 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 ARL2-SNX15V9GYD0 113 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 C11orf94C9JXX5 98 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 APOC3P02656 99 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 OR10J4P0C629 311 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 UBE2L3P68036 154 aaKnown RBP13.56□□□□□ -0.24
KRT28-201ENST00000306658 C10orf91Q5T1B1 145 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 TOMM20LQ6UXN7 152 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 Q6ZSV7 163 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 Q71RC1 249 aaPredicted RBP13.56□□□□□ -0.24
KRT28-201ENST00000306658 SUN5Q8TC36 379 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 RABAC1Q9UI14 185 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 HIVEP1P15822 2718 aa13.56□□□□□ -0.24
KRT28-201ENST00000306658 IGHV3-35A0A0C4DH35 117 aa13.55□□□□□ -0.24
KRT28-201ENST00000306658 PPP5D1E7EU14 171 aa13.55□□□□□ -0.24
KRT28-201ENST00000306658 H3BRN7 92 aa13.55□□□□□ -0.24
KRT28-201ENST00000306658 ADCYAP1P18509 176 aa13.55□□□□□ -0.24
KRT28-201ENST00000306658 SOHLH1Q5JUK2 328 aa13.55□□□□□ -0.24
KRT28-201ENST00000306658 C10orf99Q6UWK7 81 aa13.55□□□□□ -0.24
KRT28-201ENST00000306658 OR4F5Q8NH21 305 aa13.55□□□□□ -0.24
KRT28-201ENST00000306658 OR4F4Q96R69 305 aa13.55□□□□□ -0.24
KRT28-201ENST00000306658 CARHSP1Q9Y2V2 147 aaKnown RBP13.55□□□□□ -0.24
KRT28-201ENST00000306658 INAFM1C9JVW0 142 aa13.54□□□□□ -0.24
KRT28-201ENST00000306658 PYYP10082 97 aa13.54□□□□□ -0.24
KRT28-201ENST00000306658 CD81P60033 236 aa13.54□□□□□ -0.24
KRT28-201ENST00000306658 LEMD1Q68G75 181 aa13.54□□□□□ -0.24
KRT28-201ENST00000306658 RNF152Q8N8N0 203 aa13.54□□□□□ -0.24
KRT28-201ENST00000306658 FAM74A7A6NL05 159 aa13.53□□□□□ -0.24
KRT28-201ENST00000306658 TMEM250H0YL14 139 aa13.53□□□□□ -0.24
KRT28-201ENST00000306658 PDE6DO43924 150 aa13.53□□□□□ -0.24
KRT28-201ENST00000306658 CEBPGP53567 150 aa13.53□□□□□ -0.24
KRT28-201ENST00000306658 KIAA0141Q14154 515 aaPredicted RBP13.53□□□□□ -0.24
KRT28-201ENST00000306658 BPIFA4PQ86YQ2 179 aa13.53□□□□□ -0.24
KRT28-201ENST00000306658 CYB561D1Q8N8Q1 229 aa13.53□□□□□ -0.24
KRT28-201ENST00000306658 ZFAND3Q9H8U3 227 aa13.53□□□□□ -0.24
KRT28-201ENST00000306658 TMEM14CQ9P0S9 112 aa13.53□□□□□ -0.24
KRT28-201ENST00000306658 PEF1Q9UBV8 284 aaKnown RBP13.53□□□□□ -0.24
KRT28-201ENST00000306658 A0A1W2PRE2 83 aa13.53□□□□□ -0.24
KRT28-201ENST00000306658 ZNF98A6NK75 572 aa13.53□□□□□ -0.24
KRT28-201ENST00000306658 RPLP1P05386 114 aaKnown RBP13.53□□□□□ -0.24
KRT28-201ENST00000306658 KLHDC1Q8N7A1 406 aa13.53□□□□□ -0.24
KRT28-201ENST00000306658 FXYD5Q96DB9 178 aa13.53□□□□□ -0.24
KRT28-201ENST00000306658 YTHDF2Q9Y5A9 579 aaKnown RBP13.53□□□□□ -0.24
KRT28-201ENST00000306658 NDUFA4O00483 81 aa13.52□□□□□ -0.25
KRT28-201ENST00000306658 GGCTO75223 188 aaKnown RBP13.52□□□□□ -0.25
KRT28-201ENST00000306658 TRBV12-3P01733 135 aa13.52□□□□□ -0.25
KRT28-201ENST00000306658 GP9P14770 177 aa13.52□□□□□ -0.25
KRT28-201ENST00000306658 SVBPQ8N300 66 aa13.52□□□□□ -0.25
KRT28-201ENST00000306658 MYOZ3Q8TDC0 251 aa13.52□□□□□ -0.25
KRT28-201ENST00000306658 ZNF414Q96IQ9 312 aa13.52□□□□□ -0.25
KRT28-201ENST00000306658 UBE2E2Q96LR5 201 aa13.52□□□□□ -0.25
KRT28-201ENST00000306658 NKX6-2Q9C056 277 aaPredicted RBP13.52□□□□□ -0.25
KRT28-201ENST00000306658 F6UZH7 168 aa13.51□□□□□ -0.25
KRT28-201ENST00000306658 NBEAP1P0C6P0 100 aa13.51□□□□□ -0.25
KRT28-201ENST00000306658 ATP5G3P48201 142 aa13.51□□□□□ -0.25
KRT28-201ENST00000306658 HIST1H1EP10412 219 aaKnown RBP13.5□□□□□ -0.25
KRT28-201ENST00000306658 OR4F17Q8NGA8 305 aa13.5□□□□□ -0.25
KRT28-201ENST00000306658 OR5B12Q96R08 314 aa13.5□□□□□ -0.25
KRT28-201ENST00000306658 METTL26Q96S19 204 aa13.5□□□□□ -0.25
KRT28-201ENST00000306658 C16orf95Q9H693 158 aa13.5□□□□□ -0.25
KRT28-201ENST00000306658 NSD1Q96L73 2696 aaPredicted RBP13.5□□□□□ -0.25
KRT28-201ENST00000306658 IGHV3OR16-8A0A075B7F1 116 aa13.5□□□□□ -0.25
KRT28-201ENST00000306658 NPPCP23582 126 aa13.5□□□□□ -0.25
KRT28-201ENST00000306658 C20orf24Q9BUV8 137 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms