RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 SRSF7Q16629 238 aaKnown RBP eCLIP11.19□□□□□ -0.62
TRIM56-201ENST00000306085 MORN5Q5VZ52 161 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 RPL36ALQ969Q0 106 aaKnown RBP11.19□□□□□ -0.62
TRIM56-201ENST00000306085 CD55P08174 381 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 FAM201AQ5SY85 155 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 PSG8Q9UQ74 426 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 SAA2-SAA4A0A096LPE2 208 aa11.18□□□□□ -0.62
TRIM56-201ENST00000306085 SAA2P0DJI9 122 aaPredicted RBP11.18□□□□□ -0.62
TRIM56-201ENST00000306085 BHLHA9Q7RTU4 235 aa11.18□□□□□ -0.62
TRIM56-201ENST00000306085 TMEM52Q8NDY8 209 aa11.18□□□□□ -0.62
TRIM56-201ENST00000306085 MPV17L2Q567V2 206 aa11.18□□□□□ -0.62
TRIM56-201ENST00000306085 RS1O15537 224 aa11.18□□□□□ -0.62
TRIM56-201ENST00000306085 NDUFC2O95298 119 aa11.18□□□□□ -0.62
TRIM56-201ENST00000306085 APOBEC3AP31941 199 aaPredicted RBP11.18□□□□□ -0.62
TRIM56-201ENST00000306085 TSKUQ8WUA8 353 aa11.18□□□□□ -0.62
TRIM56-201ENST00000306085 NYNRINQ9P2P1 1898 aaKnown RBP11.18□□□□□ -0.62
TRIM56-201ENST00000306085 SRRM4A7MD48 611 aaKnown RBP11.18□□□□□ -0.62
TRIM56-201ENST00000306085 C8orf82Q6P1X6 216 aaPredicted RBP11.18□□□□□ -0.62
TRIM56-201ENST00000306085 CRLF1O75462 422 aa11.18□□□□□ -0.62
TRIM56-201ENST00000306085 LINC01559Q495D7 138 aa11.18□□□□□ -0.62
TRIM56-201ENST00000306085 C1orf100Q5SVJ3 147 aa11.18□□□□□ -0.62
TRIM56-201ENST00000306085 LCN12Q6JVE5 192 aa11.18□□□□□ -0.62
TRIM56-201ENST00000306085 MDS2Q8NDY4 140 aa11.18□□□□□ -0.62
TRIM56-201ENST00000306085 OSTCQ9NRP0 149 aa11.18□□□□□ -0.62
TRIM56-201ENST00000306085 PVRIGQ6DKI7 326 aa11.17□□□□□ -0.62
TRIM56-201ENST00000306085 MRPS18AQ9NVS2 196 aaKnown RBP11.17□□□□□ -0.62
TRIM56-201ENST00000306085 TRBV5-7A0A0A0MS05 114 aa11.17□□□□□ -0.62
TRIM56-201ENST00000306085 ZNF561-AS1K7EIQ3 104 aa11.17□□□□□ -0.62
TRIM56-201ENST00000306085 STRCP1A6NGW2 1772 aa11.17□□□□□ -0.62
TRIM56-201ENST00000306085 RALGAPA2Q2PPJ7 1873 aa11.17□□□□□ -0.62
TRIM56-201ENST00000306085 SBF2Q86WG5 1849 aa11.17□□□□□ -0.62
TRIM56-201ENST00000306085 WNT2P09544 360 aa11.17□□□□□ -0.62
TRIM56-201ENST00000306085 SRSF3P84103 164 aaKnown RBP11.17□□□□□ -0.62
TRIM56-201ENST00000306085 WFDC9Q8NEX5 89 aa11.17□□□□□ -0.62
TRIM56-201ENST00000306085 KIAA1551Q9HCM1 1747 aa11.17□□□□□ -0.62
TRIM56-201ENST00000306085 MBNL3Q9NUK0 354 aaKnown RBP11.17□□□□□ -0.62
TRIM56-201ENST00000306085 C12orf77C9JDV5 145 aa11.16□□□□□ -0.62
TRIM56-201ENST00000306085 AMBPP02760 352 aa11.16□□□□□ -0.62
TRIM56-201ENST00000306085 PAX8Q06710 450 aa11.16□□□□□ -0.62
TRIM56-201ENST00000306085 OCC1Q8TAD7 63 aa11.16□□□□□ -0.62
TRIM56-201ENST00000306085 PEBP1P30086 187 aaKnown RBP11.16□□□□□ -0.62
TRIM56-201ENST00000306085 EXOC3-AS1Q8N2X6 119 aa11.16□□□□□ -0.62
TRIM56-201ENST00000306085 C1QAP02745 245 aa11.16□□□□□ -0.62
TRIM56-201ENST00000306085 RASL11AQ6T310 242 aa11.16□□□□□ -0.62
TRIM56-201ENST00000306085 BOD1L2Q8IYS8 172 aa11.16□□□□□ -0.62
TRIM56-201ENST00000306085 F8VVB4 439 aa11.16□□□□□ -0.62
TRIM56-201ENST00000306085 F8VWA3 439 aa11.16□□□□□ -0.62
TRIM56-201ENST00000306085 RSPO4Q2I0M5 234 aaPredicted RBP11.16□□□□□ -0.62
TRIM56-201ENST00000306085 CDCP2Q5VXM1 449 aa11.16□□□□□ -0.62
TRIM56-201ENST00000306085 PMVKQ15126 192 aa11.15□□□□□ -0.62
TRIM56-201ENST00000306085 TNRC6BQ9UPQ9 1833 aaKnown RBP11.15□□□□□ -0.62
TRIM56-201ENST00000306085 SLC25A48Q6ZT89 311 aaKnown RBP11.15□□□□□ -0.62
TRIM56-201ENST00000306085 IL9P15248 144 aa11.15□□□□□ -0.62
TRIM56-201ENST00000306085 FAM216BQ8N7L0 139 aa11.15□□□□□ -0.62
TRIM56-201ENST00000306085 LINC01549A6NIU2 74 aa11.15□□□□□ -0.62
TRIM56-201ENST00000306085 C8orf46Q8TAG6 207 aa11.15□□□□□ -0.62
TRIM56-201ENST00000306085 LIMS1P48059 325 aa11.15□□□□□ -0.62
TRIM56-201ENST00000306085 HIST3H2BBQ8N257 126 aa11.15□□□□□ -0.63
TRIM56-201ENST00000306085 WFDC6Q9BQY6 131 aa11.15□□□□□ -0.63
TRIM56-201ENST00000306085 TCF20Q9UGU0 1960 aaKnown RBP11.14□□□□□ -0.63
TRIM56-201ENST00000306085 TMEM158Q8WZ71 300 aa11.14□□□□□ -0.63
TRIM56-201ENST00000306085 PRSS22Q9GZN4 317 aa11.14□□□□□ -0.63
TRIM56-201ENST00000306085 ZNF319Q9P2F9 582 aa11.14□□□□□ -0.63
TRIM56-201ENST00000306085 A0A087WWL8 130 aa11.14□□□□□ -0.63
TRIM56-201ENST00000306085 A0A1W2PPV9 198 aa11.14□□□□□ -0.63
TRIM56-201ENST00000306085 VCYO14598 125 aa11.14□□□□□ -0.63
TRIM56-201ENST00000306085 OVOL1O14753 267 aa11.14□□□□□ -0.63
TRIM56-201ENST00000306085 C14orf178Q8N769 122 aaPredicted RBP11.14□□□□□ -0.63
TRIM56-201ENST00000306085 ZNF525Q8N782 197 aa11.14□□□□□ -0.63
TRIM56-201ENST00000306085 PFN2P35080 140 aa11.14□□□□□ -0.63
TRIM56-201ENST00000306085 LINC01465Q8N7H1 131 aa11.14□□□□□ -0.63
TRIM56-201ENST00000306085 NOVP48745 357 aa11.14□□□□□ -0.63
TRIM56-201ENST00000306085 YBX2Q9Y2T7 364 aaKnown RBP11.14□□□□□ -0.63
TRIM56-201ENST00000306085 IGLV1-36A0A0B4J1U3 117 aa11.14□□□□□ -0.63
TRIM56-201ENST00000306085 STPG1Q5TH74 334 aa11.14□□□□□ -0.63
TRIM56-201ENST00000306085 CXCL10P02778 98 aa11.14□□□□□ -0.63
TRIM56-201ENST00000306085 SMKR1H3BMG3 65 aa11.14□□□□□ -0.63
TRIM56-201ENST00000306085 TINCRA0A1B0GVN0 87 aa11.13□□□□□ -0.63
TRIM56-201ENST00000306085 C15orf61A6NNL5 157 aa11.13□□□□□ -0.63
TRIM56-201ENST00000306085 PAPPA2Q9BXP8 1791 aa11.13□□□□□ -0.63
TRIM56-201ENST00000306085 TIMP3P35625 211 aa11.13□□□□□ -0.63
TRIM56-201ENST00000306085 EFNB3Q15768 340 aa11.13□□□□□ -0.63
TRIM56-201ENST00000306085 POU2AF1Q16633 256 aa11.13□□□□□ -0.63
TRIM56-201ENST00000306085 LYZL1Q6UWQ5 148 aa11.13□□□□□ -0.63
TRIM56-201ENST00000306085 FOXS1O43638 330 aa11.13□□□□□ -0.63
TRIM56-201ENST00000306085 DUSP15Q9H1R2 295 aaPredicted RBP11.13□□□□□ -0.63
TRIM56-201ENST00000306085 TSSC4Q9Y5U2 329 aaPredicted RBP11.13□□□□□ -0.63
TRIM56-201ENST00000306085 LY75O60449 1722 aa11.13□□□□□ -0.63
TRIM56-201ENST00000306085 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.13□□□□□ -0.63
TRIM56-201ENST00000306085 ATP6V0BQ99437 205 aa11.13□□□□□ -0.63
TRIM56-201ENST00000306085 SCRT2Q9NQ03 307 aa11.13□□□□□ -0.63
TRIM56-201ENST00000306085 FOXG1P55316 489 aaPredicted RBP11.13□□□□□ -0.63
TRIM56-201ENST00000306085 TEX38Q6PEX7 206 aa11.13□□□□□ -0.63
TRIM56-201ENST00000306085 HEPN1Q6WQI6 88 aa11.13□□□□□ -0.63
TRIM56-201ENST00000306085 NEU4Q8WWR8 484 aaPredicted RBP11.13□□□□□ -0.63
TRIM56-201ENST00000306085 SYS1-DBNDD2H3BUS1 97 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 MCRIP2Q9BUT9 160 aaKnown RBP11.12□□□□□ -0.63
TRIM56-201ENST00000306085 RPRMLQ8N4K4 120 aa11.12□□□□□ -0.63
TRIM56-201ENST00000306085 RTBDNQ9BSG5 229 aaPredicted RBP11.12□□□□□ -0.63
TRIM56-201ENST00000306085 ATP1A1-AS1Q5TC04 95 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms