RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 EXOC3-AS1Q8N2X6 119 aa11.44□□□□□ -0.58
SDC2-201ENST00000302190 OSR1Q8TAX0 266 aaPredicted RBP11.44□□□□□ -0.58
SDC2-201ENST00000302190 SORL1Q92673 2214 aa11.44□□□□□ -0.58
SDC2-201ENST00000302190 ASH1LQ9NR48 2969 aaKnown RBP11.44□□□□□ -0.58
SDC2-201ENST00000302190 ARHGAP32A7KAX9 2087 aa11.44□□□□□ -0.58
SDC2-201ENST00000302190 GGTLC3B5MD39 225 aa11.44□□□□□ -0.58
SDC2-201ENST00000302190 NDUFB8O95169 186 aa11.44□□□□□ -0.58
SDC2-201ENST00000302190 MSMPQ1L6U9 139 aa11.44□□□□□ -0.58
SDC2-201ENST00000302190 CST9LQ9H4G1 147 aa11.44□□□□□ -0.58
SDC2-201ENST00000302190 CDC42EP3Q9UKI2 254 aa11.44□□□□□ -0.58
SDC2-201ENST00000302190 FBLL1A6NHQ2 334 aaKnown RBP11.43□□□□□ -0.58
SDC2-201ENST00000302190 CORTO00230 105 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 ZNF324O75467 553 aaPredicted RBP11.43□□□□□ -0.58
SDC2-201ENST00000302190 SCGB2A1O75556 95 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 AREGP15514 252 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 Q8TCH9 128 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.43□□□□□ -0.58
SDC2-201ENST00000302190 PPIAL4CA0A0B4J2A2 164 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 K7EN84 100 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 PPIAL4GP0DN37 164 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 TMEM200BQ69YZ2 307 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 SMIM12Q96EX1 92 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 MAP1LC3CQ9BXW4 147 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 TMEM191AQ9H0A3 160 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 FOXA2Q9Y261 457 aaPredicted RBP11.43□□□□□ -0.58
SDC2-201ENST00000302190 CENPEQ02224 2701 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 WNT2P09544 360 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 TEX43Q6ZNM6 134 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 STXBP6Q8NFX7 210 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 TPSG1Q9NRR2 321 aa11.43□□□□□ -0.58
SDC2-201ENST00000302190 LOC105371242A0A075B767 164 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 IGHV1-69-2A0A0G2JMI3 117 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 TPTE2P1Q5T6R2 138 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 FAM168AQ92567 244 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 PYGO2Q9BRQ0 406 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 SFXN3Q9BWM7 321 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 FBXL7Q9UJT9 491 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 RAXQ9Y2V3 346 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 UFC1Q9Y3C8 167 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 PPBPP02775 128 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 SSBP2P81877 361 aaPredicted RBP11.42□□□□□ -0.58
SDC2-201ENST00000302190 MBNL2Q5VZF2 373 aaKnown RBP11.42□□□□□ -0.58
SDC2-201ENST00000302190 RCHY1Q96PM5 261 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 GAFA1Q96PS6 74 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 LINC00312Q9Y6C7 94 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 CCDC168Q8NDH2 2452 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 C3orf79P0CE67 100 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 MC5RP33032 325 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 BMI1P35226 326 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 C17orf58Q2M2W7 97 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 COX19Q49B96 90 aa11.42□□□□□ -0.58
SDC2-201ENST00000302190 CIARTQ8N365 385 aaPredicted RBP11.41□□□□□ -0.58
SDC2-201ENST00000302190 MEGF9Q9H1U4 602 aa11.41□□□□□ -0.58
SDC2-201ENST00000302190 PMS2P5A8MQ11 134 aa11.41□□□□□ -0.58
SDC2-201ENST00000302190 NMUP48645 174 aa11.41□□□□□ -0.58
SDC2-201ENST00000302190 MORN5Q5VZ52 161 aa11.41□□□□□ -0.58
SDC2-201ENST00000302190 RAB37Q96AX2 223 aa11.41□□□□□ -0.58
SDC2-201ENST00000302190 TMEM186Q96B77 213 aa11.41□□□□□ -0.58
SDC2-201ENST00000302190 C18orf15Q96N68 181 aa11.41□□□□□ -0.58
SDC2-201ENST00000302190 Q9H3A6 140 aa11.41□□□□□ -0.58
SDC2-201ENST00000302190 OR4C46A6NHA9 309 aa11.41□□□□□ -0.58
SDC2-201ENST00000302190 ZNF207O43670 478 aaKnown RBP11.41□□□□□ -0.58
SDC2-201ENST00000302190 PRSS1P07477 247 aa11.41□□□□□ -0.58
SDC2-201ENST00000302190 PSG1P11464 419 aa11.41□□□□□ -0.58
SDC2-201ENST00000302190 CNTFRP26992 372 aa11.41□□□□□ -0.58
SDC2-201ENST00000302190 C1orf174Q8IYL3 243 aa11.41□□□□□ -0.58
SDC2-201ENST00000302190 RAB1CQ92928 201 aa11.41□□□□□ -0.58
SDC2-201ENST00000302190 UTP20O75691 2785 aaKnown RBP11.4□□□□□ -0.58
SDC2-201ENST00000302190 CCL21O00585 134 aa11.4□□□□□ -0.58
SDC2-201ENST00000302190 NUDT3O95989 172 aa11.4□□□□□ -0.58
SDC2-201ENST00000302190 RNASE2P10153 161 aaKnown RBP11.4□□□□□ -0.58
SDC2-201ENST00000302190 LOXL3P58215 753 aa11.4□□□□□ -0.58
SDC2-201ENST00000302190 HBBP68871 147 aa11.4□□□□□ -0.58
SDC2-201ENST00000302190 ZNF841Q6ZN19 808 aa11.4□□□□□ -0.58
SDC2-201ENST00000302190 TM4SF20Q53R12 229 aa11.4□□□□□ -0.58
SDC2-201ENST00000302190 CFAP46Q8IYW2 2715 aa11.4□□□□□ -0.58
SDC2-201ENST00000302190 IGHV3OR16-10A0A075B7F0 116 aa11.4□□□□□ -0.59
SDC2-201ENST00000302190 GPX1P07203 203 aa11.4□□□□□ -0.59
SDC2-201ENST00000302190 PPOXP50336 477 aa11.4□□□□□ -0.59
SDC2-201ENST00000302190 OSTCQ9NRP0 149 aa11.4□□□□□ -0.59
SDC2-201ENST00000302190 A0A1W2PRE2 83 aa11.39□□□□□ -0.59
SDC2-201ENST00000302190 IZUMO1RA6ND01 250 aa11.39□□□□□ -0.59
SDC2-201ENST00000302190 IGFL4Q6B9Z1 124 aa11.39□□□□□ -0.59
SDC2-201ENST00000302190 BPIFA4PQ86YQ2 179 aa11.39□□□□□ -0.59
SDC2-201ENST00000302190 TMEM116Q8NCL8 245 aa11.39□□□□□ -0.59
SDC2-201ENST00000302190 EPDR1Q9UM22 224 aa11.39□□□□□ -0.59
SDC2-201ENST00000302190 TACC2O95359 2948 aa11.39□□□□□ -0.59
SDC2-201ENST00000302190 IGHG3P01860 377 aa11.39□□□□□ -0.59
SDC2-201ENST00000302190 SLAQ13239 276 aa11.39□□□□□ -0.59
SDC2-201ENST00000302190 NIT1Q86X76 327 aa11.39□□□□□ -0.59
SDC2-201ENST00000302190 NUP35Q8NFH5 326 aa11.39□□□□□ -0.59
SDC2-201ENST00000302190 GPR82Q96P67 336 aa11.39□□□□□ -0.59
SDC2-201ENST00000302190 MRPL32Q9BYC8 188 aaKnown RBP11.39□□□□□ -0.59
SDC2-201ENST00000302190 IGHV2-70DA0A0C4DH43 119 aa11.39□□□□□ -0.59
SDC2-201ENST00000302190 M0R3E3 92 aa11.39□□□□□ -0.59
SDC2-201ENST00000302190 NDFIP1Q9BT67 221 aa11.39□□□□□ -0.59
SDC2-201ENST00000302190 F11RQ9Y624 299 aaKnown RBP11.39□□□□□ -0.59
SDC2-201ENST00000302190 SVEP1Q4LDE5 3571 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 TRAV30A0A087WSZ9 112 aa11.38□□□□□ -0.59
SDC2-201ENST00000302190 TCRBV4S1A1TA0A5B7 111 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms