RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 RAB2AP61019 212 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 HBG1P69891 147 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 HBG2P69892 147 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 LEMD1Q68G75 181 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 TMEM144Q7Z5S9 345 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 KCNRGQ8N5I3 272 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 INO80EQ8NBZ0 244 aaPredicted RBP4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 TMEM116Q8NCL8 245 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 UHRF2Q96PU4 802 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 TRGV9Q99603 122 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 SCRT1Q9BWW7 348 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 NPCDR1Q9BY65 106 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 WDR61Q9GZS3 305 aaKnown RBP4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 ARL6Q9H0F7 186 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 VSIRQ9H7M9 311 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 THYN1Q9P016 225 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 SLC45A2Q9UMX9 530 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 PXMP4Q9Y6I8 212 aa4.93□□□□□ -1.62
DEPDC4-201ENST00000299185 NOTCH1P46531 2555 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 IGKV3-7A0A075B6H7 116 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 TRAV5A0A0B4J249 113 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 H3BTX0 84 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 M0QZ24 198 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 TOMM40O96008 361 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 IGLL1P15814 213 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 ATP6V0CP27449 155 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 MYCNOSP40205 109 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 CAMLGP49069 296 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 FFAR4Q5NUL3 377 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 FAM74A1Q5RGS3 127 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 ETFRF1Q6IPR1 90 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 PATE2Q6UY27 113 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 IL34Q6ZMJ4 242 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 ZNF600Q6ZNG1 722 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 SSX7Q7RTT5 188 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 OR1B1Q8NGR6 318 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 PCNPQ8WW12 178 aaKnown RBP4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 ST8SIA2Q92186 375 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 ARPC5LQ9BPX5 153 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 ZNF471Q9BX82 626 aaPredicted RBP4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 SLC25A22Q9H936 323 aa4.92□□□□□ -1.62
DEPDC4-201ENST00000299185 A0A0D9SG52 128 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 IZUMO1RA6ND01 250 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 C2orf70A6NJV1 201 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 SEC14L6B5MCN3 397 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 OVOL1O14753 267 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 HMGB3O15347 200 aaKnown RBP4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 SAP30O75446 220 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 LY86O95711 162 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 CFDP00746 253 aaPredicted RBP4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 IFNA5P01569 189 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 PRB2P02812 416 aaPredicted RBP4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 CSN3P07498 182 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 OR5G3P0C626 314 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 RD3LP0DJH9 198 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 ORM2P19652 201 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 S100A11P31949 105 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 FCGR2BP31994 310 aaPredicted RBP4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 ATP5IP56385 69 aaPredicted RBP4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 B2MP61769 119 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 KLF5Q13887 457 aaPredicted RBP4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 ZNF345Q14585 488 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 FAM122CQ6P4D5 195 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 TEPPQ6URK8 271 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 MIR17HGQ75NE6 70 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 OR4F17Q8NGA8 305 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 RNF125Q96EQ8 232 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 OR4F4Q96R69 305 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 SLC25A32Q9H2D1 315 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 SLC39A9Q9NUM3 307 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 MLXQ9UH92 298 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 PFDN2Q9UHV9 154 aa4.91□□□□□ -1.62
DEPDC4-201ENST00000299185 TGP01266 2768 aa4.9□□□□□ -1.62
DEPDC4-201ENST00000299185 WNK1Q9H4A3 2382 aa4.9□□□□□ -1.62
DEPDC4-201ENST00000299185 IGHV7-4-1A0A0J9YVY3 117 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 A0A1B0GV50 99 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 KANTRA0A1W2PQU2 76 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 WI2-2373I1.2A0A1W2PRP0 233 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 H3BRN7 92 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 NDUFA4O00483 81 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 COX7A2P2O60397 106 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 DFFBO76075 338 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 C4BPBP20851 252 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 ZP3P21754 424 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 TFPI2P48307 235 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 FHITP49789 147 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 DEFB1P60022 68 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 YPEL3P61236 119 aaPredicted RBP4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 RELQ04864 619 aaPredicted RBP4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 ATP6V1FQ16864 119 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 FAM209BQ5JX69 171 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 SPSB3Q6PJ21 355 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 OR9G4Q8NGQ1 327 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 SCGB1C1Q8TD33 95 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 TMED6Q8WW62 240 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 TXN2Q99757 166 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 GGACTQ9BVM4 153 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 NPVFQ9HCQ7 196 aa4.9□□□□□ -1.63
DEPDC4-201ENST00000299185 BORCS7-ASMTA0A0B4J1R7 106 aa4.89□□□□□ -1.63
DEPDC4-201ENST00000299185 A8MWP6 167 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 486.3 ms