RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 M0QZK8 103 aa19.47■□□□□ 0.71
SPTSSA-201ENST00000298130 ASH1LQ9NR48 2969 aaKnown RBP19.46■□□□□ 0.71
SPTSSA-201ENST00000298130 STPG4Q8N801 248 aa19.46■□□□□ 0.71
SPTSSA-201ENST00000298130 DLEU1O43261 78 aa19.46■□□□□ 0.71
SPTSSA-201ENST00000298130 GPR82Q96P67 336 aa19.46■□□□□ 0.71
SPTSSA-201ENST00000298130 INSIG2Q9Y5U4 225 aa19.46■□□□□ 0.71
SPTSSA-201ENST00000298130 FAM181BA6NEQ2 426 aa19.45■□□□□ 0.7
SPTSSA-201ENST00000298130 ZNF138P52744 262 aa19.45■□□□□ 0.7
SPTSSA-201ENST00000298130 LINC00311Q8N616 119 aa19.45■□□□□ 0.7
SPTSSA-201ENST00000298130 URB1-AS1Q96HZ7 61 aa19.45■□□□□ 0.7
SPTSSA-201ENST00000298130 IGHV2-26A0A0B4J1V2 119 aa19.45■□□□□ 0.7
SPTSSA-201ENST00000298130 SHISA9B4DS77 424 aa19.45■□□□□ 0.7
SPTSSA-201ENST00000298130 RBP4P02753 201 aa19.45■□□□□ 0.7
SPTSSA-201ENST00000298130 PSG1P11464 419 aa19.45■□□□□ 0.7
SPTSSA-201ENST00000298130 LINC00173Q6ZV60 143 aa19.45■□□□□ 0.7
SPTSSA-201ENST00000298130 MCRIP2Q9BUT9 160 aaKnown RBP19.45■□□□□ 0.7
SPTSSA-201ENST00000298130 IGHV1-69-2A0A0G2JMI3 117 aa19.44■□□□□ 0.7
SPTSSA-201ENST00000298130 LY6HO94772 140 aa19.44■□□□□ 0.7
SPTSSA-201ENST00000298130 MC5RP33032 325 aa19.44■□□□□ 0.7
SPTSSA-201ENST00000298130 SSX8Q7RTT4 187 aa19.44■□□□□ 0.7
SPTSSA-201ENST00000298130 Q8NA96 180 aa19.44■□□□□ 0.7
SPTSSA-201ENST00000298130 SIGLEC9Q9Y336 463 aa19.44■□□□□ 0.7
SPTSSA-201ENST00000298130 GOLT1BQ9Y3E0 138 aa19.44■□□□□ 0.7
SPTSSA-201ENST00000298130 GP9P14770 177 aa19.44■□□□□ 0.7
SPTSSA-201ENST00000298130 HNRNPA3P51991 378 aaKnown RBP19.44■□□□□ 0.7
SPTSSA-201ENST00000298130 WIPF2Q8TF74 440 aaPredicted RBP19.44■□□□□ 0.7
SPTSSA-201ENST00000298130 C17orf77Q96MU5 243 aa19.44■□□□□ 0.7
SPTSSA-201ENST00000298130 CRYGCP07315 174 aa19.44■□□□□ 0.7
SPTSSA-201ENST00000298130 IGF2-ASQ6U949 168 aa19.44■□□□□ 0.7
SPTSSA-201ENST00000298130 OR8B2Q96RD0 313 aa19.44■□□□□ 0.7
SPTSSA-201ENST00000298130 P01737 135 aa19.43■□□□□ 0.7
SPTSSA-201ENST00000298130 TCRAP04437 139 aa19.43■□□□□ 0.7
SPTSSA-201ENST00000298130 RPP21Q9H633 154 aaKnown RBP19.43■□□□□ 0.7
SPTSSA-201ENST00000298130 MUC6Q6W4X9 2439 aa19.43■□□□□ 0.7
SPTSSA-201ENST00000298130 LGALS7P47929 136 aa19.43■□□□□ 0.7
SPTSSA-201ENST00000298130 HINT1P49773 126 aaPredicted RBP19.43■□□□□ 0.7
SPTSSA-201ENST00000298130 PLGLAQ15195 96 aa19.43■□□□□ 0.7
SPTSSA-201ENST00000298130 PRNTQ86SH4 94 aa19.43■□□□□ 0.7
SPTSSA-201ENST00000298130 C22orf15Q8WYQ4 148 aa19.43■□□□□ 0.7
SPTSSA-201ENST00000298130 UQCR10Q9UDW1 63 aa19.43■□□□□ 0.7
SPTSSA-201ENST00000298130 IGHV1-3A0A0C4DH29 117 aa19.42■□□□□ 0.7
SPTSSA-201ENST00000298130 A0A1W2PRD5 423 aa19.42■□□□□ 0.7
SPTSSA-201ENST00000298130 A0A1W2PRF3 423 aa19.42■□□□□ 0.7
SPTSSA-201ENST00000298130 A0A1W2PRM7 423 aa19.42■□□□□ 0.7
SPTSSA-201ENST00000298130 GOLT1AQ6ZVE7 132 aa19.42■□□□□ 0.7
SPTSSA-201ENST00000298130 ZNF596Q8TC21 504 aa19.42■□□□□ 0.7
SPTSSA-201ENST00000298130 MLST8Q9BVC4 326 aa19.42■□□□□ 0.7
SPTSSA-201ENST00000298130 FOSL1P15407 271 aa19.41■□□□□ 0.7
SPTSSA-201ENST00000298130 PPP1R27Q86WC6 154 aa19.41■□□□□ 0.7
SPTSSA-201ENST00000298130 LINC01560Q8TB33 94 aa19.41■□□□□ 0.7
SPTSSA-201ENST00000298130 TRGV9Q99603 122 aa19.41■□□□□ 0.7
SPTSSA-201ENST00000298130 MRPL27Q9P0M9 148 aaKnown RBP19.41■□□□□ 0.7
SPTSSA-201ENST00000298130 H0Y8G0 127 aa19.41■□□□□ 0.7
SPTSSA-201ENST00000298130 KLF17Q5JT82 389 aaPredicted RBP19.41■□□□□ 0.7
SPTSSA-201ENST00000298130 ETFRF1Q6IPR1 90 aa19.41■□□□□ 0.7
SPTSSA-201ENST00000298130 TMEM116Q8NCL8 245 aa19.41■□□□□ 0.7
SPTSSA-201ENST00000298130 A0A1B0GXF2 115 aa19.4■□□□□ 0.7
SPTSSA-201ENST00000298130 TEX22C9J3V5 150 aa19.4■□□□□ 0.7
SPTSSA-201ENST00000298130 HBBP68871 147 aa19.4■□□□□ 0.7
SPTSSA-201ENST00000298130 C5orf17Q8NAS9 161 aa19.4■□□□□ 0.7
SPTSSA-201ENST00000298130 DAZAP1Q96EP5 407 aaKnown RBP19.4■□□□□ 0.7
SPTSSA-201ENST00000298130 FAM71F2Q6NXP2 309 aa19.39■□□□□ 0.7
SPTSSA-201ENST00000298130 C8orf46Q8TAG6 207 aa19.39■□□□□ 0.7
SPTSSA-201ENST00000298130 HIGD1AQ9Y241 93 aa19.39■□□□□ 0.7
SPTSSA-201ENST00000298130 KLF12Q9Y4X4 402 aa19.39■□□□□ 0.7
SPTSSA-201ENST00000298130 CACNA1BQ00975 2339 aa19.39■□□□□ 0.7
SPTSSA-201ENST00000298130 TEX45Q8NA69 505 aa19.39■□□□□ 0.69
SPTSSA-201ENST00000298130 STXBP6Q8NFX7 210 aa19.39■□□□□ 0.69
SPTSSA-201ENST00000298130 SRSF12Q8WXF0 261 aaKnown RBP19.39■□□□□ 0.69
SPTSSA-201ENST00000298130 LAMTOR2Q9Y2Q5 125 aa19.39■□□□□ 0.69
SPTSSA-201ENST00000298130 C2orf70A6NJV1 201 aa19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 CSN3P07498 182 aa19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 IGLL1P15814 213 aa19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 LDLRAD2Q5SZI1 272 aa19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 ASCL5Q7RTU5 278 aa19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 F11RQ9Y624 299 aaKnown RBP19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 ANKHD1Q8IWZ3 2542 aaKnown RBP19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 BUB1B-PAK6H3BSN5 160 aa19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 TOMM40O96008 361 aa19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 COL5A1-AS1Q5SY13 56 aa19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 BCL6BQ8N143 479 aaPredicted RBP19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 RALYQ9UKM9 306 aaKnown RBP19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 LTAP01374 205 aa19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 IGLV1-47P01700 117 aa19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 CRYGBP07316 175 aa19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 IGLC1P0CG04 106 aa19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 COL8A1P27658 744 aa19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 GRNP28799 593 aaKnown RBP19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 DMRTA1Q5VZB9 504 aa19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 SLC25A39Q9BZJ4 359 aaPredicted RBP19.38■□□□□ 0.69
SPTSSA-201ENST00000298130 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.37■□□□□ 0.69
SPTSSA-201ENST00000298130 CNIH1O95406 144 aa19.37■□□□□ 0.69
SPTSSA-201ENST00000298130 BTF3P20290 206 aaKnown RBP19.37■□□□□ 0.69
SPTSSA-201ENST00000298130 RASL11AQ6T310 242 aa19.37■□□□□ 0.69
SPTSSA-201ENST00000298130 RPEQ96AT9 228 aa19.37■□□□□ 0.69
SPTSSA-201ENST00000298130 TPPP3Q9BW30 176 aa19.37■□□□□ 0.69
SPTSSA-201ENST00000298130 HILPDAQ9Y5L2 63 aa19.37■□□□□ 0.69
SPTSSA-201ENST00000298130 NDUFB8O95169 186 aa19.37■□□□□ 0.69
SPTSSA-201ENST00000298130 KLF5Q13887 457 aaPredicted RBP19.37■□□□□ 0.69
SPTSSA-201ENST00000298130 PRSS22Q9GZN4 317 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms