RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 RASL11BQ9BPW5 248 aa16.79■□□□□ 0.28
SOX17-201ENST00000297316 PFN1P07737 140 aaKnown RBP16.79■□□□□ 0.28
SOX17-201ENST00000297316 TIGITQ495A1 244 aa16.79■□□□□ 0.28
SOX17-201ENST00000297316 Q96MF0 132 aa16.79■□□□□ 0.28
SOX17-201ENST00000297316 H7BYZ3 331 aa16.78■□□□□ 0.28
SOX17-201ENST00000297316 FOSL1P15407 271 aa16.78■□□□□ 0.28
SOX17-201ENST00000297316 CCDC168Q8NDH2 2452 aa16.78■□□□□ 0.28
SOX17-201ENST00000297316 FANCD2OSQ96PS1 177 aa16.78■□□□□ 0.28
SOX17-201ENST00000297316 PAXXQ9BUH6 204 aa16.78■□□□□ 0.28
SOX17-201ENST00000297316 CREBBPQ92793 2442 aa16.78■□□□□ 0.28
SOX17-201ENST00000297316 HLA-DRB1P01911 266 aa16.78■□□□□ 0.28
SOX17-201ENST00000297316 SUMO1P63165 101 aaKnown RBP16.78■□□□□ 0.28
SOX17-201ENST00000297316 LOXL1Q08397 574 aaPredicted RBP16.78■□□□□ 0.28
SOX17-201ENST00000297316 OCC1Q8TAD7 63 aa16.78■□□□□ 0.28
SOX17-201ENST00000297316 FXYD5Q96DB9 178 aa16.78■□□□□ 0.28
SOX17-201ENST00000297316 PRDM13Q9H4Q3 707 aa16.78■□□□□ 0.28
SOX17-201ENST00000297316 SRD5A3Q9H8P0 318 aa16.78■□□□□ 0.28
SOX17-201ENST00000297316 MDFIC2A0A1B0GVS7 189 aa16.77■□□□□ 0.28
SOX17-201ENST00000297316 IGKV1-17P01599 117 aa16.77■□□□□ 0.28
SOX17-201ENST00000297316 PSG1P11464 419 aa16.77■□□□□ 0.28
SOX17-201ENST00000297316 LY6EQ16553 131 aa16.77■□□□□ 0.28
SOX17-201ENST00000297316 MEGF9Q9H1U4 602 aa16.77■□□□□ 0.28
SOX17-201ENST00000297316 ITPR2Q14571 2701 aa16.77■□□□□ 0.27
SOX17-201ENST00000297316 HIST1H1BP16401 226 aaKnown RBP16.76■□□□□ 0.27
SOX17-201ENST00000297316 LRRC75A-AS1Q8N1F1 130 aa16.76■□□□□ 0.27
SOX17-201ENST00000297316 RBM14Q96PK6 669 aaKnown RBP16.76■□□□□ 0.27
SOX17-201ENST00000297316 PYGO2Q9BRQ0 406 aa16.76■□□□□ 0.27
SOX17-201ENST00000297316 A0A1W2PRE2 83 aa16.76■□□□□ 0.27
SOX17-201ENST00000297316 K7EN84 100 aa16.76■□□□□ 0.27
SOX17-201ENST00000297316 IGHV4-31P0DP07 118 aa16.76■□□□□ 0.27
SOX17-201ENST00000297316 GALR1P47211 349 aa16.76■□□□□ 0.27
SOX17-201ENST00000297316 LEMD1Q68G75 181 aa16.76■□□□□ 0.27
SOX17-201ENST00000297316 C5orf56Q8N8D9 126 aa16.76■□□□□ 0.27
SOX17-201ENST00000297316 PITPNC1Q9UKF7 332 aa16.76■□□□□ 0.27
SOX17-201ENST00000297316 ITPR3Q14573 2671 aa16.75■□□□□ 0.27
SOX17-201ENST00000297316 NPIPB5A8MRT5 1133 aa16.75■□□□□ 0.27
SOX17-201ENST00000297316 ATP6V0E1O15342 81 aa16.75■□□□□ 0.27
SOX17-201ENST00000297316 PACRGQ96M98 296 aaPredicted RBP16.75■□□□□ 0.27
SOX17-201ENST00000297316 HIST1H2BLQ99880 126 aa16.75■□□□□ 0.27
SOX17-201ENST00000297316 PDZD2O15018 2839 aa16.75■□□□□ 0.27
SOX17-201ENST00000297316 IGLV11-55A0A075B6I3 123 aa16.75■□□□□ 0.27
SOX17-201ENST00000297316 HYPMO75409 117 aa16.75■□□□□ 0.27
SOX17-201ENST00000297316 AMY1AP04745 511 aa16.75■□□□□ 0.27
SOX17-201ENST00000297316 PLP1P60201 277 aa16.75■□□□□ 0.27
SOX17-201ENST00000297316 ECSCRQ19T08 205 aa16.75■□□□□ 0.27
SOX17-201ENST00000297316 BCL6BQ8N143 479 aaPredicted RBP16.75■□□□□ 0.27
SOX17-201ENST00000297316 TTC9CQ8N5M4 171 aa16.75■□□□□ 0.27
SOX17-201ENST00000297316 ANAPC16Q96DE5 110 aa16.75■□□□□ 0.27
SOX17-201ENST00000297316 H3BUX3 64 aa16.74■□□□□ 0.27
SOX17-201ENST00000297316 GATA3P23771 443 aa16.74■□□□□ 0.27
SOX17-201ENST00000297316 LYZP61626 148 aa16.74■□□□□ 0.27
SOX17-201ENST00000297316 OR5B12Q96R08 314 aa16.74■□□□□ 0.27
SOX17-201ENST00000297316 GATCO43716 136 aaKnown RBP16.73■□□□□ 0.27
SOX17-201ENST00000297316 TMUB1Q9BVT8 246 aa16.73■□□□□ 0.27
SOX17-201ENST00000297316 G3V318 75 aa16.73■□□□□ 0.27
SOX17-201ENST00000297316 TMEM183AQ8IXX5 376 aa16.73■□□□□ 0.27
SOX17-201ENST00000297316 SFRP2Q96HF1 295 aa16.73■□□□□ 0.27
SOX17-201ENST00000297316 PPP5D1E7EU14 171 aa16.72■□□□□ 0.27
SOX17-201ENST00000297316 IGHV3-23P01764 117 aa16.72■□□□□ 0.27
SOX17-201ENST00000297316 CENPWQ5EE01 88 aa16.72■□□□□ 0.27
SOX17-201ENST00000297316 OR1L6Q8NGR2 347 aa16.72■□□□□ 0.27
SOX17-201ENST00000297316 MOB4Q9Y3A3 225 aa16.72■□□□□ 0.27
SOX17-201ENST00000297316 MXRA5Q9NR99 2828 aa16.72■□□□□ 0.27
SOX17-201ENST00000297316 A0A1W2PPQ1 181 aa16.71■□□□□ 0.27
SOX17-201ENST00000297316 C9JCJ5 164 aa16.71■□□□□ 0.27
SOX17-201ENST00000297316 F8W735 103 aaPredicted RBP16.71■□□□□ 0.27
SOX17-201ENST00000297316 OR2J3O76001 311 aa16.71■□□□□ 0.27
SOX17-201ENST00000297316 UNQ5815/PRO19632Q6UWF5 114 aa16.71■□□□□ 0.27
SOX17-201ENST00000297316 SGMS2Q8NHU3 365 aa16.71■□□□□ 0.27
SOX17-201ENST00000297316 LINC00527Q9UJ94 153 aa16.71■□□□□ 0.27
SOX17-201ENST00000297316 TLN2Q9Y4G6 2542 aa16.71■□□□□ 0.27
SOX17-201ENST00000297316 HELTA6NFD8 242 aa16.71■□□□□ 0.27
SOX17-201ENST00000297316 NDUFB8O95169 186 aa16.71■□□□□ 0.27
SOX17-201ENST00000297316 GP9P14770 177 aa16.71■□□□□ 0.27
SOX17-201ENST00000297316 TEX38Q6PEX7 206 aa16.71■□□□□ 0.27
SOX17-201ENST00000297316 ZNF329Q86UD4 541 aa16.71■□□□□ 0.27
SOX17-201ENST00000297316 BLNKQ8WV28 456 aa16.71■□□□□ 0.27
SOX17-201ENST00000297316 LINC00479Q96M42 142 aa16.71■□□□□ 0.27
SOX17-201ENST00000297316 H3BTX0 84 aa16.7■□□□□ 0.26
SOX17-201ENST00000297316 OR5I1Q13606 314 aa16.7■□□□□ 0.26
SOX17-201ENST00000297316 DNLZQ5SXM8 178 aa16.7■□□□□ 0.26
SOX17-201ENST00000297316 WFDC11Q8NEX6 87 aa16.7■□□□□ 0.26
SOX17-201ENST00000297316 MBD6Q96DN6 1003 aa16.7■□□□□ 0.26
SOX17-201ENST00000297316 HIGD1AQ9Y241 93 aa16.7■□□□□ 0.26
SOX17-201ENST00000297316 CD99P14209 185 aa16.7■□□□□ 0.26
SOX17-201ENST00000297316 FAM3BP58499 235 aaPredicted RBP16.7■□□□□ 0.26
SOX17-201ENST00000297316 DEFA6Q01524 100 aa16.7■□□□□ 0.26
SOX17-201ENST00000297316 CIARTQ8N365 385 aaPredicted RBP16.69■□□□□ 0.26
SOX17-201ENST00000297316 UNC79Q9P2D8 2635 aa16.69■□□□□ 0.26
SOX17-201ENST00000297316 MYCNOSP40205 109 aa16.69■□□□□ 0.26
SOX17-201ENST00000297316 RANP62826 216 aaKnown RBP16.69■□□□□ 0.26
SOX17-201ENST00000297316 DEFB112Q30KQ8 113 aa16.69■□□□□ 0.26
SOX17-201ENST00000297316 SLC25A39Q9BZJ4 359 aaPredicted RBP16.69■□□□□ 0.26
SOX17-201ENST00000297316 MRPL27Q9P0M9 148 aaKnown RBP16.69■□□□□ 0.26
SOX17-201ENST00000297316 GNG4P50150 75 aa16.68■□□□□ 0.26
SOX17-201ENST00000297316 GNG5P63218 68 aa16.68■□□□□ 0.26
SOX17-201ENST00000297316 IGF2BP2-AS1Q96M15 143 aa16.68■□□□□ 0.26
SOX17-201ENST00000297316 XKRY2A2RUG3 117 aa16.68■□□□□ 0.26
SOX17-201ENST00000297316 A6NDX4 124 aa16.68■□□□□ 0.26
SOX17-201ENST00000297316 GGCTO75223 188 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms