RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 ZNF835Q9Y2P0 537 aa15.34■□□□□ 0.05
TRA2A-201ENST00000297071 OVOL3O00110 214 aa15.33■□□□□ 0.05
TRA2A-201ENST00000297071 TNFRSF13BO14836 293 aaPredicted RBP15.33■□□□□ 0.05
TRA2A-201ENST00000297071 NKX2-8O15522 239 aa15.33■□□□□ 0.05
TRA2A-201ENST00000297071 VAMP3Q15836 100 aa15.33■□□□□ 0.05
TRA2A-201ENST00000297071 TMEM200BQ69YZ2 307 aa15.33■□□□□ 0.05
TRA2A-201ENST00000297071 NUDT3O95989 172 aa15.33■□□□□ 0.04
TRA2A-201ENST00000297071 ORM2P19652 201 aa15.33■□□□□ 0.04
TRA2A-201ENST00000297071 Q6AWC8 147 aa15.33■□□□□ 0.04
TRA2A-201ENST00000297071 BLNKQ8WV28 456 aa15.33■□□□□ 0.04
TRA2A-201ENST00000297071 CRYGBP07316 175 aa15.32■□□□□ 0.04
TRA2A-201ENST00000297071 CD40P25942 277 aa15.32■□□□□ 0.04
TRA2A-201ENST00000297071 RIGQ13278 110 aa15.32■□□□□ 0.04
TRA2A-201ENST00000297071 COTL1Q14019 142 aa15.32■□□□□ 0.04
TRA2A-201ENST00000297071 Q6ZVH6 145 aa15.32■□□□□ 0.04
TRA2A-201ENST00000297071 TNFRSF14Q92956 283 aa15.32■□□□□ 0.04
TRA2A-201ENST00000297071 SH2D7A6NKC9 451 aaPredicted RBP15.31■□□□□ 0.04
TRA2A-201ENST00000297071 C10orf55Q5SWW7 151 aa15.31■□□□□ 0.04
TRA2A-201ENST00000297071 C1orf185Q5T7R7 199 aa15.31■□□□□ 0.04
TRA2A-201ENST00000297071 ASPHD1Q5U4P2 390 aa15.31■□□□□ 0.04
TRA2A-201ENST00000297071 HIGD1AQ9Y241 93 aa15.31■□□□□ 0.04
TRA2A-201ENST00000297071 hDV102S1A0JD36 115 aa15.31■□□□□ 0.04
TRA2A-201ENST00000297071 COX8AP10176 69 aa15.31■□□□□ 0.04
TRA2A-201ENST00000297071 COL8A1P27658 744 aa15.31■□□□□ 0.04
TRA2A-201ENST00000297071 NBL1P41271 181 aa15.31■□□□□ 0.04
TRA2A-201ENST00000297071 RPL27AP46776 148 aaKnown RBP15.31■□□□□ 0.04
TRA2A-201ENST00000297071 DLX6P56179 175 aa15.31■□□□□ 0.04
TRA2A-201ENST00000297071 C21orf62-AS1Q17RA5 79 aa15.31■□□□□ 0.04
TRA2A-201ENST00000297071 LINC00173Q6ZV60 143 aa15.31■□□□□ 0.04
TRA2A-201ENST00000297071 LYPD1Q8N2G4 141 aa15.31■□□□□ 0.04
TRA2A-201ENST00000297071 TMEM75Q8N9X5 138 aa15.31■□□□□ 0.04
TRA2A-201ENST00000297071 NEU4Q8WWR8 484 aaPredicted RBP15.31■□□□□ 0.04
TRA2A-201ENST00000297071 ATRXP46100 2492 aa15.3■□□□□ 0.04
TRA2A-201ENST00000297071 A0A1B0GUT8 65 aa15.3■□□□□ 0.04
TRA2A-201ENST00000297071 IGLV2-11P01706 119 aa15.3■□□□□ 0.04
TRA2A-201ENST00000297071 CCL3L1P16619 93 aa15.3■□□□□ 0.04
TRA2A-201ENST00000297071 SEC11AP67812 179 aa15.3■□□□□ 0.04
TRA2A-201ENST00000297071 SRSF8Q9BRL6 282 aaKnown RBP15.3■□□□□ 0.04
TRA2A-201ENST00000297071 C17orf100A8MU93 164 aa15.29■□□□□ 0.04
TRA2A-201ENST00000297071 PLAUP00749 431 aa15.29■□□□□ 0.04
TRA2A-201ENST00000297071 CEACAM8P31997 349 aaPredicted RBP15.29■□□□□ 0.04
TRA2A-201ENST00000297071 KAAG1Q9UBP8 84 aa15.29■□□□□ 0.04
TRA2A-201ENST00000297071 FAM215AQ9Y5M1 114 aa15.29■□□□□ 0.04
TRA2A-201ENST00000297071 FRYLO94915 3013 aa15.29■□□□□ 0.04
TRA2A-201ENST00000297071 PPIAL4EA0A075B759 164 aa15.29■□□□□ 0.04
TRA2A-201ENST00000297071 PPIAL4DF5H284 164 aa15.29■□□□□ 0.04
TRA2A-201ENST00000297071 NDUFB3O43676 98 aa15.29■□□□□ 0.04
TRA2A-201ENST00000297071 SLC25A17O43808 307 aa15.29■□□□□ 0.04
TRA2A-201ENST00000297071 PPIAL4FP0DN26 164 aa15.29■□□□□ 0.04
TRA2A-201ENST00000297071 CSN1S1P47710 185 aa15.29■□□□□ 0.04
TRA2A-201ENST00000297071 F11RQ9Y624 299 aaKnown RBP15.29■□□□□ 0.04
TRA2A-201ENST00000297071 OR1N2Q8NGR9 330 aa15.28■□□□□ 0.04
TRA2A-201ENST00000297071 ZNF747Q9BV97 191 aa15.28■□□□□ 0.04
TRA2A-201ENST00000297071 PEF1Q9UBV8 284 aaKnown RBP15.28■□□□□ 0.04
TRA2A-201ENST00000297071 NAV3Q8IVL0 2385 aa15.28■□□□□ 0.04
TRA2A-201ENST00000297071 TMEM178BH3BS89 294 aa15.27■□□□□ 0.04
TRA2A-201ENST00000297071 FCN3O75636 299 aa15.27■□□□□ 0.04
TRA2A-201ENST00000297071 FAM87AP0C7U9 286 aa15.27■□□□□ 0.04
TRA2A-201ENST00000297071 HTR1DP28221 377 aa15.27■□□□□ 0.04
TRA2A-201ENST00000297071 GPR183P32249 361 aa15.27■□□□□ 0.04
TRA2A-201ENST00000297071 RBPJQ06330 500 aa15.27■□□□□ 0.04
TRA2A-201ENST00000297071 IGFL3Q6UXB1 125 aa15.27■□□□□ 0.04
TRA2A-201ENST00000297071 ZNF493Q6ZR52 646 aa15.27■□□□□ 0.04
TRA2A-201ENST00000297071 ZADH2Q8N4Q0 377 aa15.27■□□□□ 0.04
TRA2A-201ENST00000297071 TMUB1Q9BVT8 246 aa15.27■□□□□ 0.04
TRA2A-201ENST00000297071 AP5S1Q9NUS5 200 aa15.27■□□□□ 0.04
TRA2A-201ENST00000297071 CADP27708 2225 aa15.27■□□□□ 0.03
TRA2A-201ENST00000297071 MUC21A0A0G2JKD1 596 aa15.27■□□□□ 0.03
TRA2A-201ENST00000297071 MUC21A0A140T8X8 626 aa15.27■□□□□ 0.03
TRA2A-201ENST00000297071 M0QZ24 198 aa15.27■□□□□ 0.03
TRA2A-201ENST00000297071 TMEM155Q4W5P6 130 aa15.27■□□□□ 0.03
TRA2A-201ENST00000297071 MUC21Q5SSG8 566 aa15.27■□□□□ 0.03
TRA2A-201ENST00000297071 OR10AG1Q8NH19 301 aa15.27■□□□□ 0.03
TRA2A-201ENST00000297071 CST9LQ9H4G1 147 aa15.27■□□□□ 0.03
TRA2A-201ENST00000297071 RPH3ALQ9UNE2 315 aa15.27■□□□□ 0.03
TRA2A-201ENST00000297071 FREM2Q5SZK8 3169 aa15.26■□□□□ 0.03
TRA2A-201ENST00000297071 IGF2-ASQ6U949 168 aa15.26■□□□□ 0.03
TRA2A-201ENST00000297071 NPFFR1Q9GZQ6 430 aa15.26■□□□□ 0.03
TRA2A-201ENST00000297071 K7EQM0 130 aa15.25■□□□□ 0.03
TRA2A-201ENST00000297071 IGHV3-48P01763 117 aa15.25■□□□□ 0.03
TRA2A-201ENST00000297071 IGLC1P0CG04 106 aa15.25■□□□□ 0.03
TRA2A-201ENST00000297071 TMEM108Q6UXF1 575 aa15.25■□□□□ 0.03
TRA2A-201ENST00000297071 RPRMLQ8N4K4 120 aa15.25■□□□□ 0.03
TRA2A-201ENST00000297071 SGK494Q96LW2 274 aa15.25■□□□□ 0.03
TRA2A-201ENST00000297071 RNF5Q99942 180 aa15.25■□□□□ 0.03
TRA2A-201ENST00000297071 SCNM1Q9BWG6 230 aa15.25■□□□□ 0.03
TRA2A-201ENST00000297071 SLC25A39Q9BZJ4 359 aaPredicted RBP15.25■□□□□ 0.03
TRA2A-201ENST00000297071 THBDP07204 575 aa15.24■□□□□ 0.03
TRA2A-201ENST00000297071 DIAPH2-AS1Q14236 149 aa15.24■□□□□ 0.03
TRA2A-201ENST00000297071 OCIAD2Q56VL3 154 aa15.24■□□□□ 0.03
TRA2A-201ENST00000297071 TPSG1Q9NRR2 321 aa15.24■□□□□ 0.03
TRA2A-201ENST00000297071 U3KQK5 164 aa15.24■□□□□ 0.03
TRA2A-201ENST00000297071 K7EM74 188 aa15.24■□□□□ 0.03
TRA2A-201ENST00000297071 SIVA1O15304 175 aa15.24■□□□□ 0.03
TRA2A-201ENST00000297071 WT1P19544 449 aaPredicted RBP15.24■□□□□ 0.03
TRA2A-201ENST00000297071 LOXP28300 417 aaPredicted RBP15.24■□□□□ 0.03
TRA2A-201ENST00000297071 ARF6P62330 175 aa15.24■□□□□ 0.03
TRA2A-201ENST00000297071 LGALS9BQ3B8N2 356 aa15.24■□□□□ 0.03
TRA2A-201ENST00000297071 PSMG4Q5JS54 123 aa15.24■□□□□ 0.03
TRA2A-201ENST00000297071 LGALS9CQ6DKI2 356 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms