RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 TCF24Q7RTU0 167 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 TEX45Q8NA69 505 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 RNASEH2CQ8TDP1 164 aaKnown RBP7.42□□□□□ -1.22
PRDM9-201ENST00000296682 TMEM18Q96B42 140 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 ZNF503Q96F45 646 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 C17orf77Q96MU5 243 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 M0R3E3 92 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 IGLV1-47P01700 117 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 GPX4P36969 197 aaPredicted RBP7.42□□□□□ -1.22
PRDM9-201ENST00000296682 COMPP49747 757 aaPredicted RBP7.42□□□□□ -1.22
PRDM9-201ENST00000296682 SLC25A2Q9BXI2 301 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 PEX7O00628 323 aa7.41□□□□□ -1.22
PRDM9-201ENST00000296682 SRP14P37108 136 aaKnown RBP7.41□□□□□ -1.22
PRDM9-201ENST00000296682 ATP5J2P56134 94 aa7.41□□□□□ -1.22
PRDM9-201ENST00000296682 FAM120AOSQ5T036 256 aa7.41□□□□□ -1.22
PRDM9-201ENST00000296682 BTF3L4Q96K17 158 aa7.41□□□□□ -1.22
PRDM9-201ENST00000296682 PGLYRP4Q96LB8 373 aa7.41□□□□□ -1.22
PRDM9-201ENST00000296682 COL8A1P27658 744 aa7.41□□□□□ -1.22
PRDM9-201ENST00000296682 DLX6P56179 175 aa7.41□□□□□ -1.22
PRDM9-201ENST00000296682 DEFA6Q01524 100 aa7.41□□□□□ -1.22
PRDM9-201ENST00000296682 DYNAPQ8N1N2 210 aa7.41□□□□□ -1.22
PRDM9-201ENST00000296682 FAM19A2Q8N3H0 131 aa7.41□□□□□ -1.22
PRDM9-201ENST00000296682 ARL2-SNX15V9GYD0 113 aa7.41□□□□□ -1.22
PRDM9-201ENST00000296682 GPR183P32249 361 aa7.41□□□□□ -1.22
PRDM9-201ENST00000296682 SERTM2A0A1B0GWG4 89 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 G3V318 75 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 AMBPP02760 352 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 SRIP30626 198 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 RPL15P61313 204 aaKnown RBP7.4□□□□□ -1.22
PRDM9-201ENST00000296682 FBLN7Q53RD9 439 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 FAM71F2Q6NXP2 309 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 TOMM20LQ6UXN7 152 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 BCL6BQ8N143 479 aaPredicted RBP7.4□□□□□ -1.22
PRDM9-201ENST00000296682 CIARTQ8N365 385 aaPredicted RBP7.4□□□□□ -1.22
PRDM9-201ENST00000296682 OR4F17Q8NGA8 305 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 NEU4Q8WWR8 484 aaPredicted RBP7.4□□□□□ -1.22
PRDM9-201ENST00000296682 Q9H3A6 140 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 IL36BQ9NZH7 164 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 F11RQ9Y624 299 aaKnown RBP7.4□□□□□ -1.22
PRDM9-201ENST00000296682 A0A087X0M5 115 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 A0A1B0GX30 115 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 ZNF785A8K8V0 405 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 F2Z2F3 143 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 NUPR1O60356 82 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 AMTP48728 403 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 ATP5IP56385 69 aaPredicted RBP7.4□□□□□ -1.22
PRDM9-201ENST00000296682 CELSR1Q9NYQ6 3014 aa7.4□□□□□ -1.22
PRDM9-201ENST00000296682 ARPC1AQ92747 370 aa7.4□□□□□ -1.23
PRDM9-201ENST00000296682 HSPB9Q9BQS6 159 aa7.4□□□□□ -1.23
PRDM9-201ENST00000296682 IGSF10Q6WRI0 2623 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 DOPEY1Q5JWR5 2465 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 ELOA3CA0A087WX78 387 aaPredicted RBP7.39□□□□□ -1.23
PRDM9-201ENST00000296682 TSTD3H0UI37 97 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 PAX2Q02962 417 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 IQCJQ1A5X6 159 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 TMEM183AQ8IXX5 376 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 LINC00311Q8N616 119 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 OR4A5Q8NH83 315 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 OR5R1Q8NH85 324 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 VN1R17PQ8TDU5 208 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 FBXL7Q9UJT9 491 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 SOX21Q9Y651 276 aaPredicted RBP7.39□□□□□ -1.23
PRDM9-201ENST00000296682 TGOLN2O43493 480 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 P01737 135 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 SAA4P35542 130 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 RNASEKQ6P5S7 137 aaKnown RBP7.39□□□□□ -1.23
PRDM9-201ENST00000296682 ATOH7Q8N100 152 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 NOL4LQ96MY1 436 aaPredicted RBP7.39□□□□□ -1.23
PRDM9-201ENST00000296682 HRNRQ86YZ3 2850 aaPredicted RBP7.39□□□□□ -1.23
PRDM9-201ENST00000296682 IGKV1D-37A0A075B6S9 117 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 SERF1AO75920 110 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 IGHV3-11P01762 117 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 FAM106CPP0CH98 169 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 PAX1P15863 534 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 PRTN3P24158 256 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 C5orf64Q2M2E5 130 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 COA6Q5JTJ3 125 aaKnown RBP7.39□□□□□ -1.23
PRDM9-201ENST00000296682 SIGLECL1Q8N7X8 197 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 NEU1Q99519 415 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 TXNDC17Q9BRA2 123 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 EPDR1Q9UM22 224 aa7.39□□□□□ -1.23
PRDM9-201ENST00000296682 ITPR1Q14643 2758 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 TRAV40A0A0B4J280 105 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 A0A1W2PRE2 83 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 CLEC19AQ6UXS0 136 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 ZNF705AQ6ZN79 300 aaPredicted RBP7.38□□□□□ -1.23
PRDM9-201ENST00000296682 NUDT10Q8NFP7 164 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 NUDT11Q96G61 164 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 FAM167A-AS1Q96KT0 104 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 RNF2Q99496 336 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 MRPL32Q9BYC8 188 aaKnown RBP7.38□□□□□ -1.23
PRDM9-201ENST00000296682 SLC25A39Q9BZJ4 359 aaPredicted RBP7.38□□□□□ -1.23
PRDM9-201ENST00000296682 PAM16Q9Y3D7 125 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 A6NNC1 897 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 HIGD1CA8MV81 97 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 BRS3P32247 399 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 CCDC144NLQ6NUI1 221 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 LCNL1Q6ZST4 164 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 BPIFA4PQ86YQ2 179 aa7.38□□□□□ -1.23
PRDM9-201ENST00000296682 C21orf62Q9NYP8 219 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms