RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 ORMDL3Q8N138 153 aa11.43□□□□□ -0.58
FUBP1-201ENST00000294623 SPAG8Q99932 426 aaPredicted RBP11.43□□□□□ -0.58
FUBP1-201ENST00000294623 DCTN5Q9BTE1 182 aa11.43□□□□□ -0.58
FUBP1-201ENST00000294623 SSUH2Q9Y2M2 353 aa11.43□□□□□ -0.58
FUBP1-201ENST00000294623 KBTBD11-OT1A0A1B0GTJ5 212 aa11.42□□□□□ -0.58
FUBP1-201ENST00000294623 LINC01546A6NGU7 62 aa11.42□□□□□ -0.58
FUBP1-201ENST00000294623 CD24P25063 80 aa11.42□□□□□ -0.58
FUBP1-201ENST00000294623 NMUP48645 174 aa11.42□□□□□ -0.58
FUBP1-201ENST00000294623 RND1Q92730 232 aa11.42□□□□□ -0.58
FUBP1-201ENST00000294623 Q9H3A6 140 aa11.42□□□□□ -0.58
FUBP1-201ENST00000294623 LINC00574Q9H8X3 128 aa11.42□□□□□ -0.58
FUBP1-201ENST00000294623 KNL1Q8NG31 2342 aa11.42□□□□□ -0.58
FUBP1-201ENST00000294623 IGKV1D-37A0A075B6S9 117 aa11.41□□□□□ -0.58
FUBP1-201ENST00000294623 LY6G6EA0A0G2JKS1 128 aa11.41□□□□□ -0.58
FUBP1-201ENST00000294623 IGLL5B9A064 214 aa11.41□□□□□ -0.58
FUBP1-201ENST00000294623 GP9P14770 177 aa11.41□□□□□ -0.58
FUBP1-201ENST00000294623 EVI2AP22794 236 aa11.41□□□□□ -0.58
FUBP1-201ENST00000294623 ACP1P24666 158 aa11.41□□□□□ -0.58
FUBP1-201ENST00000294623 COL8A2P25067 703 aa11.41□□□□□ -0.58
FUBP1-201ENST00000294623 GAGE13Q4V321 117 aa11.41□□□□□ -0.58
FUBP1-201ENST00000294623 TMEM75Q8N9X5 138 aa11.41□□□□□ -0.58
FUBP1-201ENST00000294623 U3KQA8 63 aa11.41□□□□□ -0.58
FUBP1-201ENST00000294623 PAX8Q06710 450 aa11.41□□□□□ -0.58
FUBP1-201ENST00000294623 LINC00696Q6ZRV3 163 aa11.41□□□□□ -0.58
FUBP1-201ENST00000294623 ZNF479Q96JC4 524 aa11.41□□□□□ -0.58
FUBP1-201ENST00000294623 BRCA2P51587 3418 aa11.41□□□□□ -0.58
FUBP1-201ENST00000294623 SLC25A17O43808 307 aa11.4□□□□□ -0.58
FUBP1-201ENST00000294623 TIMM8AO60220 97 aaPredicted RBP11.4□□□□□ -0.58
FUBP1-201ENST00000294623 IFI27P40305 119 aaPredicted RBP11.4□□□□□ -0.58
FUBP1-201ENST00000294623 FXYD2P54710 66 aa11.4□□□□□ -0.58
FUBP1-201ENST00000294623 C17orf58Q2M2W7 97 aa11.4□□□□□ -0.58
FUBP1-201ENST00000294623 PRELID3AQ96N28 172 aa11.4□□□□□ -0.58
FUBP1-201ENST00000294623 NKX2-8O15522 239 aa11.4□□□□□ -0.58
FUBP1-201ENST00000294623 ARMS2P0C7Q2 107 aa11.4□□□□□ -0.58
FUBP1-201ENST00000294623 ASPHD1Q5U4P2 390 aa11.4□□□□□ -0.58
FUBP1-201ENST00000294623 MBNL2Q5VZF2 373 aaKnown RBP11.4□□□□□ -0.58
FUBP1-201ENST00000294623 PVRIGQ6DKI7 326 aa11.4□□□□□ -0.58
FUBP1-201ENST00000294623 TMEM167AQ8TBQ9 72 aa11.4□□□□□ -0.58
FUBP1-201ENST00000294623 MRPS17Q9Y2R5 130 aaKnown RBP11.4□□□□□ -0.58
FUBP1-201ENST00000294623 IGKV1D-17A0A075B6S4 117 aa11.39□□□□□ -0.59
FUBP1-201ENST00000294623 ATP5LO75964 103 aa11.39□□□□□ -0.59
FUBP1-201ENST00000294623 SAA1P0DJI8 122 aaPredicted RBP11.39□□□□□ -0.59
FUBP1-201ENST00000294623 FAM104BQ5XKR9 115 aa11.39□□□□□ -0.59
FUBP1-201ENST00000294623 PCP2Q8IVA1 136 aa11.39□□□□□ -0.59
FUBP1-201ENST00000294623 LYPD1Q8N2G4 141 aa11.39□□□□□ -0.59
FUBP1-201ENST00000294623 CIARTQ8N365 385 aaPredicted RBP11.39□□□□□ -0.59
FUBP1-201ENST00000294623 NPIPB3Q92617 1050 aa11.39□□□□□ -0.59
FUBP1-201ENST00000294623 TIMM8BQ9Y5J9 83 aaPredicted RBP11.39□□□□□ -0.59
FUBP1-201ENST00000294623 TM4SF5O14894 197 aa11.39□□□□□ -0.59
FUBP1-201ENST00000294623 CRYGCP07315 174 aa11.39□□□□□ -0.59
FUBP1-201ENST00000294623 MYOD1P15172 320 aa11.39□□□□□ -0.59
FUBP1-201ENST00000294623 Q0VFX4 171 aa11.39□□□□□ -0.59
FUBP1-201ENST00000294623 WFDC2Q14508 124 aa11.39□□□□□ -0.59
FUBP1-201ENST00000294623 C1orf229Q6ZS94 237 aaPredicted RBP11.39□□□□□ -0.59
FUBP1-201ENST00000294623 C8orf86Q6ZUL3 223 aa11.39□□□□□ -0.59
FUBP1-201ENST00000294623 CXorf67Q86X51 503 aaPredicted RBP11.39□□□□□ -0.59
FUBP1-201ENST00000294623 SLC25A39Q9BZJ4 359 aaPredicted RBP11.39□□□□□ -0.59
FUBP1-201ENST00000294623 ASCC3Q8N3C0 2202 aaKnown RBP11.38□□□□□ -0.59
FUBP1-201ENST00000294623 NDUFS7O75251 213 aa11.38□□□□□ -0.59
FUBP1-201ENST00000294623 CCL11P51671 97 aa11.38□□□□□ -0.59
FUBP1-201ENST00000294623 SRSF12Q8WXF0 261 aaKnown RBP11.38□□□□□ -0.59
FUBP1-201ENST00000294623 SPANXA1Q9NS26 97 aa11.38□□□□□ -0.59
FUBP1-201ENST00000294623 PRO0461Q9UI25 63 aa11.38□□□□□ -0.59
FUBP1-201ENST00000294623 DYSFO75923 2080 aa11.38□□□□□ -0.59
FUBP1-201ENST00000294623 PCSK5Q92824 1860 aa11.38□□□□□ -0.59
FUBP1-201ENST00000294623 A0A1B0GWB2 263 aa11.37□□□□□ -0.59
FUBP1-201ENST00000294623 EPOPA6NHQ4 379 aa11.37□□□□□ -0.59
FUBP1-201ENST00000294623 MLANAQ16655 118 aa11.37□□□□□ -0.59
FUBP1-201ENST00000294623 C1orf162Q8NEQ5 155 aaPredicted RBP11.37□□□□□ -0.59
FUBP1-201ENST00000294623 FREM1Q5H8C1 2179 aa11.37□□□□□ -0.59
FUBP1-201ENST00000294623 H3BMG7 143 aa11.37□□□□□ -0.59
FUBP1-201ENST00000294623 KLRC4-KLRK1H3BQV0 150 aa11.37□□□□□ -0.59
FUBP1-201ENST00000294623 KLF17Q5JT82 389 aaPredicted RBP11.37□□□□□ -0.59
FUBP1-201ENST00000294623 PEAR1Q5VY43 1037 aaPredicted RBP11.37□□□□□ -0.59
FUBP1-201ENST00000294623 ARPC1AQ92747 370 aa11.37□□□□□ -0.59
FUBP1-201ENST00000294623 LINC00312Q9Y6C7 94 aa11.37□□□□□ -0.59
FUBP1-201ENST00000294623 CABIN1Q9Y6J0 2220 aa11.37□□□□□ -0.59
FUBP1-201ENST00000294623 SERTM2A0A1B0GWG4 89 aa11.36□□□□□ -0.59
FUBP1-201ENST00000294623 IGLV2-11P01706 119 aa11.36□□□□□ -0.59
FUBP1-201ENST00000294623 RRN3P1Q2M238 152 aa11.36□□□□□ -0.59
FUBP1-201ENST00000294623 ZNF562Q6V9R5 426 aa11.36□□□□□ -0.59
FUBP1-201ENST00000294623 ZNF833PQ6ZTB9 187 aa11.36□□□□□ -0.59
FUBP1-201ENST00000294623 TMEM116Q8NCL8 245 aa11.36□□□□□ -0.59
FUBP1-201ENST00000294623 C1QTNF4Q9BXJ3 329 aa11.36□□□□□ -0.59
FUBP1-201ENST00000294623 TTTY12Q9BZ98 90 aa11.36□□□□□ -0.59
FUBP1-201ENST00000294623 NHP2Q9NX24 153 aaKnown RBP11.36□□□□□ -0.59
FUBP1-201ENST00000294623 D6R8Y8 96 aa11.36□□□□□ -0.59
FUBP1-201ENST00000294623 TWIST1Q15672 202 aa11.36□□□□□ -0.59
FUBP1-201ENST00000294623 C12orf49Q9H741 205 aa11.36□□□□□ -0.59
FUBP1-201ENST00000294623 ERG28Q9UKR5 140 aa11.36□□□□□ -0.59
FUBP1-201ENST00000294623 F11RQ9Y624 299 aaKnown RBP11.36□□□□□ -0.59
FUBP1-201ENST00000294623 TRBV25-1A0A075B6N4 114 aa11.35□□□□□ -0.59
FUBP1-201ENST00000294623 IGHV3-64DA0A0J9YX35 117 aa11.35□□□□□ -0.59
FUBP1-201ENST00000294623 ZNF785A8K8V0 405 aa11.35□□□□□ -0.59
FUBP1-201ENST00000294623 IGKV3-15P01624 115 aa11.35□□□□□ -0.59
FUBP1-201ENST00000294623 IGKCP01834 107 aa11.35□□□□□ -0.59
FUBP1-201ENST00000294623 TMEM95Q3KNT9 176 aa11.35□□□□□ -0.59
FUBP1-201ENST00000294623 ETDBQ3ZM63 59 aa11.35□□□□□ -0.59
FUBP1-201ENST00000294623 LYRM7Q5U5X0 104 aa11.35□□□□□ -0.59
FUBP1-201ENST00000294623 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms