RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 SAA4P35542 130 aa11.04□□□□□ -0.64
NXF1-201ENST00000294172 MYCNOSP40205 109 aa11.04□□□□□ -0.64
NXF1-201ENST00000294172 SLC35B1P78383 322 aa11.04□□□□□ -0.64
NXF1-201ENST00000294172 CA1P00915 261 aaPredicted RBP11.04□□□□□ -0.64
NXF1-201ENST00000294172 FRMD6-AS1P0C7T7 363 aa11.04□□□□□ -0.64
NXF1-201ENST00000294172 PKIAP61925 76 aa11.04□□□□□ -0.64
NXF1-201ENST00000294172 UBE2G1P62253 170 aa11.04□□□□□ -0.64
NXF1-201ENST00000294172 PRR27Q6MZM9 219 aa11.04□□□□□ -0.64
NXF1-201ENST00000294172 OR5R1Q8NH85 324 aa11.04□□□□□ -0.64
NXF1-201ENST00000294172 FANCD2OSQ96PS1 177 aa11.04□□□□□ -0.64
NXF1-201ENST00000294172 TBL2Q9Y4P3 447 aaKnown RBP11.04□□□□□ -0.64
NXF1-201ENST00000294172 TMEM8BA6NDV4 472 aa11.03□□□□□ -0.64
NXF1-201ENST00000294172 NPIPB5A8MRT5 1133 aa11.03□□□□□ -0.64
NXF1-201ENST00000294172 ZNF705GA8MUZ8 300 aaPredicted RBP11.03□□□□□ -0.64
NXF1-201ENST00000294172 GNG7O60262 68 aa11.03□□□□□ -0.64
NXF1-201ENST00000294172 IGHV3-23P01764 117 aa11.03□□□□□ -0.64
NXF1-201ENST00000294172 IER3P46695 156 aa11.03□□□□□ -0.64
NXF1-201ENST00000294172 EBI3Q14213 229 aa11.03□□□□□ -0.64
NXF1-201ENST00000294172 TMEM18Q96B42 140 aa11.03□□□□□ -0.64
NXF1-201ENST00000294172 Q9H3A6 140 aa11.03□□□□□ -0.64
NXF1-201ENST00000294172 UTP20O75691 2785 aaKnown RBP11.03□□□□□ -0.64
NXF1-201ENST00000294172 IGLV11-55A0A075B6I3 123 aa11.03□□□□□ -0.64
NXF1-201ENST00000294172 TRAV9-1A0A075B6T8 112 aa11.03□□□□□ -0.64
NXF1-201ENST00000294172 TSTD3H0UI37 97 aa11.03□□□□□ -0.64
NXF1-201ENST00000294172 IL4P05112 153 aa11.03□□□□□ -0.64
NXF1-201ENST00000294172 ADMP35318 185 aa11.03□□□□□ -0.64
NXF1-201ENST00000294172 MRPL27Q9P0M9 148 aaKnown RBP11.03□□□□□ -0.64
NXF1-201ENST00000294172 YPEL3P61236 119 aaPredicted RBP11.02□□□□□ -0.64
NXF1-201ENST00000294172 Q56UQ5 140 aa11.02□□□□□ -0.64
NXF1-201ENST00000294172 TTC9CQ8N5M4 171 aa11.02□□□□□ -0.64
NXF1-201ENST00000294172 AJUBAQ96IF1 538 aa11.02□□□□□ -0.64
NXF1-201ENST00000294172 CCL19Q99731 98 aa11.02□□□□□ -0.64
NXF1-201ENST00000294172 CELSR1Q9NYQ6 3014 aa11.02□□□□□ -0.65
NXF1-201ENST00000294172 IGHV7-81A0A0B4J1V7 117 aa11.02□□□□□ -0.65
NXF1-201ENST00000294172 GATCO43716 136 aaKnown RBP11.02□□□□□ -0.65
NXF1-201ENST00000294172 OR2J3O76001 311 aa11.02□□□□□ -0.65
NXF1-201ENST00000294172 BRS3P32247 399 aa11.02□□□□□ -0.65
NXF1-201ENST00000294172 TMEM183BQ1AE95 376 aa11.02□□□□□ -0.65
NXF1-201ENST00000294172 Q8N9W7 124 aa11.02□□□□□ -0.65
NXF1-201ENST00000294172 FAM168AQ92567 244 aa11.02□□□□□ -0.65
NXF1-201ENST00000294172 RNF125Q96EQ8 232 aa11.02□□□□□ -0.65
NXF1-201ENST00000294172 MRPL18Q9H0U6 180 aaKnown RBP11.02□□□□□ -0.65
NXF1-201ENST00000294172 ZNF586Q9NXT0 402 aa11.02□□□□□ -0.65
NXF1-201ENST00000294172 CRYBG3Q68DQ2 2970 aa11.02□□□□□ -0.65
NXF1-201ENST00000294172 IGHV3OR16-10A0A075B7F0 116 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 A0A1B0GUS0 222 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 TOMM40O96008 361 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 MFAP4P55083 255 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 PIP4P2Q8N4L2 257 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 GBGT1Q8N5D6 347 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 ZNF491Q8N8L2 437 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 C5orf17Q8NAS9 161 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 ATG101Q9BSB4 218 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 C1RLQ9NZP8 487 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 ZFHX3Q15911 3703 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 GRIFINA4D1Z8 144 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 SNURFLB1AK76 121 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 NDUFB8O95169 186 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 EGR2P11161 476 aaPredicted RBP11.01□□□□□ -0.65
NXF1-201ENST00000294172 FCGR2BP31994 310 aaPredicted RBP11.01□□□□□ -0.65
NXF1-201ENST00000294172 TMEM256Q8N2U0 113 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 EXOC3-AS1Q8N2X6 119 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 TMEM68Q96MH6 324 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 HSPB9Q9BQS6 159 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 C21orf62Q9NYP8 219 aa11.01□□□□□ -0.65
NXF1-201ENST00000294172 NPFFO15130 113 aa11□□□□□ -0.65
NXF1-201ENST00000294172 HIST1H1EP10412 219 aaKnown RBP11□□□□□ -0.65
NXF1-201ENST00000294172 DDTP30046 118 aa11□□□□□ -0.65
NXF1-201ENST00000294172 LURAP1LQ8IV03 231 aa11□□□□□ -0.65
NXF1-201ENST00000294172 NUDT10Q8NFP7 164 aa11□□□□□ -0.65
NXF1-201ENST00000294172 NUDT11Q96G61 164 aa11□□□□□ -0.65
NXF1-201ENST00000294172 SHANK2-AS3Q9BTD1 123 aa11□□□□□ -0.65
NXF1-201ENST00000294172 TMUB1Q9BVT8 246 aa11□□□□□ -0.65
NXF1-201ENST00000294172 THYN1Q9P016 225 aa11□□□□□ -0.65
NXF1-201ENST00000294172 TMEM14CQ9P0S9 112 aa11□□□□□ -0.65
NXF1-201ENST00000294172 TRAV30A0A087WSZ9 112 aa11□□□□□ -0.65
NXF1-201ENST00000294172 OR2T8A6NH00 312 aa11□□□□□ -0.65
NXF1-201ENST00000294172 TCRAP04437 139 aa11□□□□□ -0.65
NXF1-201ENST00000294172 RAB4BP61018 213 aa11□□□□□ -0.65
NXF1-201ENST00000294172 ECSCRQ19T08 205 aa11□□□□□ -0.65
NXF1-201ENST00000294172 MRPL54Q6P161 138 aaKnown RBP11□□□□□ -0.65
NXF1-201ENST00000294172 BPIFA4PQ86YQ2 179 aa11□□□□□ -0.65
NXF1-201ENST00000294172 BCL6BQ8N143 479 aaPredicted RBP11□□□□□ -0.65
NXF1-201ENST00000294172 C14orf144Q96I85 54 aa11□□□□□ -0.65
NXF1-201ENST00000294172 USP24Q9UPU5 2620 aa10.99□□□□□ -0.65
NXF1-201ENST00000294172 IGHV4-61A0A0C4DH41 118 aa10.99□□□□□ -0.65
NXF1-201ENST00000294172 CENPVL3A0A0U1RRI6 287 aa10.99□□□□□ -0.65
NXF1-201ENST00000294172 SMIM27A0A1W2PRY6 76 aa10.99□□□□□ -0.65
NXF1-201ENST00000294172 SH2D7A6NKC9 451 aaPredicted RBP10.99□□□□□ -0.65
NXF1-201ENST00000294172 H3BRN7 92 aa10.99□□□□□ -0.65
NXF1-201ENST00000294172 NUPR1O60356 82 aa10.99□□□□□ -0.65
NXF1-201ENST00000294172 RNF224P0DH78 156 aa10.99□□□□□ -0.65
NXF1-201ENST00000294172 RPL19P84098 196 aaKnown RBP10.99□□□□□ -0.65
NXF1-201ENST00000294172 USF2Q15853 346 aaPredicted RBP10.99□□□□□ -0.65
NXF1-201ENST00000294172 CMTM2Q8TAZ6 248 aa10.99□□□□□ -0.65
NXF1-201ENST00000294172 C17orf77Q96MU5 243 aa10.99□□□□□ -0.65
NXF1-201ENST00000294172 GPR82Q96P67 336 aa10.99□□□□□ -0.65
NXF1-201ENST00000294172 PIMREGQ9BSJ6 248 aa10.99□□□□□ -0.65
NXF1-201ENST00000294172 OTORQ9NRC9 128 aa10.99□□□□□ -0.65
NXF1-201ENST00000294172 KLF12Q9Y4X4 402 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms