RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 RPL32P62910 135 aaKnown RBP13.29□□□□□ -0.28
SSRP1-202ENST00000293880 TRACP01848 142 aa13.29□□□□□ -0.28
SSRP1-202ENST00000293880 ERCC8Q13216 396 aa13.29□□□□□ -0.28
SSRP1-202ENST00000293880 PRCDQ00LT1 54 aa13.29□□□□□ -0.28
SSRP1-202ENST00000293880 FAM90A2PQ658T7 463 aa13.29□□□□□ -0.28
SSRP1-202ENST00000293880 DUTP33316 252 aaKnown RBP13.29□□□□□ -0.28
SSRP1-202ENST00000293880 CYTL1Q9NRR1 136 aa13.28□□□□□ -0.28
SSRP1-202ENST00000293880 C3orf79P0CE67 100 aa13.28□□□□□ -0.28
SSRP1-202ENST00000293880 RNF144BQ7Z419 303 aa13.28□□□□□ -0.28
SSRP1-202ENST00000293880 FGF16O43320 207 aa13.28□□□□□ -0.28
SSRP1-202ENST00000293880 PRSS57Q6UWY2 283 aa13.28□□□□□ -0.28
SSRP1-202ENST00000293880 METRNQ9UJH8 293 aa13.28□□□□□ -0.28
SSRP1-202ENST00000293880 NUP35Q8NFH5 326 aa13.28□□□□□ -0.28
SSRP1-202ENST00000293880 A0A087WWL8 130 aa13.28□□□□□ -0.28
SSRP1-202ENST00000293880 TCF15Q12870 199 aa13.28□□□□□ -0.28
SSRP1-202ENST00000293880 TRGV11A0A075B6L2 103 aa13.27□□□□□ -0.28
SSRP1-202ENST00000293880 NABP1Q96AH0 204 aa13.27□□□□□ -0.28
SSRP1-202ENST00000293880 SLC25A39Q9BZJ4 359 aaPredicted RBP13.27□□□□□ -0.28
SSRP1-202ENST00000293880 PSME4Q14997 1843 aa13.27□□□□□ -0.28
SSRP1-202ENST00000293880 IGKV1-27A0A075B6S5 117 aa13.27□□□□□ -0.28
SSRP1-202ENST00000293880 SAP30O75446 220 aa13.27□□□□□ -0.28
SSRP1-202ENST00000293880 FOXF2Q12947 444 aa13.27□□□□□ -0.28
SSRP1-202ENST00000293880 IGKV1-12A0A0C4DH73 117 aa13.27□□□□□ -0.29
SSRP1-202ENST00000293880 IGKV1D-12P01611 117 aa13.27□□□□□ -0.29
SSRP1-202ENST00000293880 LYPD3O95274 346 aa13.27□□□□□ -0.29
SSRP1-202ENST00000293880 KLF17Q5JT82 389 aaPredicted RBP13.27□□□□□ -0.29
SSRP1-202ENST00000293880 CLPSL1A2RUU4 121 aa13.27□□□□□ -0.29
SSRP1-202ENST00000293880 THBDP07204 575 aa13.27□□□□□ -0.29
SSRP1-202ENST00000293880 ZNF876PQ49A33 203 aa13.27□□□□□ -0.29
SSRP1-202ENST00000293880 STPG4Q8N801 248 aa13.27□□□□□ -0.29
SSRP1-202ENST00000293880 ATP6V0BQ99437 205 aa13.27□□□□□ -0.29
SSRP1-202ENST00000293880 SVILO95425 2214 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 IFITM1P13164 125 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 CKAP5Q14008 2032 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 SRSF7Q16629 238 aaKnown RBP eCLIP13.26□□□□□ -0.29
SSRP1-202ENST00000293880 UBE2DNLQ8IWF7 75 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 TMEM86BQ8N661 226 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 NYNRINQ9P2P1 1898 aaKnown RBP13.26□□□□□ -0.29
SSRP1-202ENST00000293880 SBF2Q86WG5 1849 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 FOXG1P55316 489 aaPredicted RBP13.26□□□□□ -0.29
SSRP1-202ENST00000293880 C5orf63A6NC05 138 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 J3QRE1 110 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 WNT2P09544 360 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 CSTL1Q9H114 145 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 IFI6P09912 130 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 TMEM126AQ9H061 195 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 ARID2Q68CP9 1835 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 TRGV1A0A0A0MS02 117 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 ASPHD1Q5U4P2 390 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 TMEM200BQ69YZ2 307 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 LINC00477Q96M19 166 aa13.26□□□□□ -0.29
SSRP1-202ENST00000293880 B5MCH6 92 aa13.25□□□□□ -0.29
SSRP1-202ENST00000293880 TMEM238C9JI98 176 aa13.25□□□□□ -0.29
SSRP1-202ENST00000293880 IGHV1-46P01743 117 aa13.25□□□□□ -0.29
SSRP1-202ENST00000293880 DIDO1Q9BTC0 2240 aaKnown RBP13.25□□□□□ -0.29
SSRP1-202ENST00000293880 A0A1B0GUS0 222 aa13.25□□□□□ -0.29
SSRP1-202ENST00000293880 J3QW42 95 aa13.25□□□□□ -0.29
SSRP1-202ENST00000293880 CD5P06127 495 aa13.25□□□□□ -0.29
SSRP1-202ENST00000293880 LY6DQ14210 128 aa13.25□□□□□ -0.29
SSRP1-202ENST00000293880 TMEM158Q8WZ71 300 aa13.25□□□□□ -0.29
SSRP1-202ENST00000293880 UBE2E2Q96LR5 201 aa13.25□□□□□ -0.29
SSRP1-202ENST00000293880 IGHV2-26A0A0B4J1V2 119 aa13.25□□□□□ -0.29
SSRP1-202ENST00000293880 FCN3O75636 299 aa13.24□□□□□ -0.29
SSRP1-202ENST00000293880 AZU1P20160 251 aa13.24□□□□□ -0.29
SSRP1-202ENST00000293880 C15orf32Q32M92 178 aa13.24□□□□□ -0.29
SSRP1-202ENST00000293880 C14orf178Q8N769 122 aaPredicted RBP13.24□□□□□ -0.29
SSRP1-202ENST00000293880 GAGE1Q13065 139 aa13.24□□□□□ -0.29
SSRP1-202ENST00000293880 CHAC1Q9BUX1 264 aa13.24□□□□□ -0.29
SSRP1-202ENST00000293880 CACNA1GO43497 2377 aa13.24□□□□□ -0.29
SSRP1-202ENST00000293880 TRBV20-1A0A075B6N2 111 aa13.24□□□□□ -0.29
SSRP1-202ENST00000293880 LINC00271P0C7V0 271 aa13.24□□□□□ -0.29
SSRP1-202ENST00000293880 FAM90A1Q86YD7 464 aa13.24□□□□□ -0.29
SSRP1-202ENST00000293880 LILRA1O75019 489 aa13.24□□□□□ -0.29
SSRP1-202ENST00000293880 SPXQ9BT56 116 aa13.24□□□□□ -0.29
SSRP1-202ENST00000293880 PARP14Q460N5 1801 aa13.23□□□□□ -0.29
SSRP1-202ENST00000293880 TRAV41A0A0B4J266 112 aa13.23□□□□□ -0.29
SSRP1-202ENST00000293880 MORN5Q5VZ52 161 aa13.23□□□□□ -0.29
SSRP1-202ENST00000293880 RASL11AQ6T310 242 aa13.23□□□□□ -0.29
SSRP1-202ENST00000293880 BRD3OSQ6XYD6 125 aa13.23□□□□□ -0.29
SSRP1-202ENST00000293880 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.23□□□□□ -0.29
SSRP1-202ENST00000293880 H3BMM0 161 aa13.23□□□□□ -0.29
SSRP1-202ENST00000293880 SVIPQ8NHG7 77 aa13.23□□□□□ -0.29
SSRP1-202ENST00000293880 UBE2WQ96B02 151 aa13.23□□□□□ -0.29
SSRP1-202ENST00000293880 PRSS22Q9GZN4 317 aa13.23□□□□□ -0.29
SSRP1-202ENST00000293880 F2Z2F3 143 aa13.23□□□□□ -0.29
SSRP1-202ENST00000293880 DUSP14O95147 198 aaKnown RBP13.23□□□□□ -0.29
SSRP1-202ENST00000293880 CD177Q8N6Q3 437 aa13.23□□□□□ -0.29
SSRP1-202ENST00000293880 REG4Q9BYZ8 158 aa13.23□□□□□ -0.29
SSRP1-202ENST00000293880 WDR90Q96KV7 1748 aa13.23□□□□□ -0.29
SSRP1-202ENST00000293880 CFHR3Q02985 330 aa13.22□□□□□ -0.29
SSRP1-202ENST00000293880 TEX43Q6ZNM6 134 aa13.22□□□□□ -0.29
SSRP1-202ENST00000293880 C8orf49Q96NF6 230 aa13.22□□□□□ -0.29
SSRP1-202ENST00000293880 GHRHP01286 108 aa13.22□□□□□ -0.29
SSRP1-202ENST00000293880 RBM3P98179 157 aaKnown RBP13.22□□□□□ -0.29
SSRP1-202ENST00000293880 LRRC37AA6NMS7 1700 aa13.22□□□□□ -0.29
SSRP1-202ENST00000293880 GAGE12JA6NER3 117 aa13.22□□□□□ -0.29
SSRP1-202ENST00000293880 GAGE4Q13068 117 aa13.22□□□□□ -0.29
SSRP1-202ENST00000293880 GAGE5Q13069 117 aa13.22□□□□□ -0.29
SSRP1-202ENST00000293880 GAGE6Q13070 117 aa13.22□□□□□ -0.29
SSRP1-202ENST00000293880 WNK3Q9BYP7 1800 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms