RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 Q9H3A6 140 aa17.24■□□□□ 0.35
PAXBP1-201ENST00000290178 IGF2RP11717 2491 aa17.24■□□□□ 0.35
PAXBP1-201ENST00000290178 IGLC1P0CG04 106 aa17.24■□□□□ 0.35
PAXBP1-201ENST00000290178 CAMPP49913 170 aa17.24■□□□□ 0.35
PAXBP1-201ENST00000290178 FBLN7Q53RD9 439 aa17.24■□□□□ 0.35
PAXBP1-201ENST00000290178 NRN1Q9NPD7 142 aa17.24■□□□□ 0.35
PAXBP1-201ENST00000290178 CNIH1O95406 144 aa17.23■□□□□ 0.35
PAXBP1-201ENST00000290178 COX19Q49B96 90 aa17.23■□□□□ 0.35
PAXBP1-201ENST00000290178 TEX43Q6ZNM6 134 aa17.23■□□□□ 0.35
PAXBP1-201ENST00000290178 TCF24Q7RTU0 167 aa17.23■□□□□ 0.35
PAXBP1-201ENST00000290178 SNHG12Q9BXW3 62 aa17.23■□□□□ 0.35
PAXBP1-201ENST00000290178 A6NNC1 897 aa17.23■□□□□ 0.35
PAXBP1-201ENST00000290178 I3L2K1 104 aa17.23■□□□□ 0.35
PAXBP1-201ENST00000290178 KLRD1Q13241 179 aa17.23■□□□□ 0.35
PAXBP1-201ENST00000290178 OR8B3Q8NGG8 313 aa17.23■□□□□ 0.35
PAXBP1-201ENST00000290178 KCNS1Q96KK3 526 aa17.23■□□□□ 0.35
PAXBP1-201ENST00000290178 OR8B2Q96RD0 313 aa17.23■□□□□ 0.35
PAXBP1-201ENST00000290178 HIGD1AQ9Y241 93 aa17.23■□□□□ 0.35
PAXBP1-201ENST00000290178 ATRXP46100 2492 aa17.22■□□□□ 0.35
PAXBP1-201ENST00000290178 TRAV8-1A0A0A6YYK1 113 aa17.22■□□□□ 0.35
PAXBP1-201ENST00000290178 CA7P43166 264 aa17.22■□□□□ 0.35
PAXBP1-201ENST00000290178 MMDQ15546 238 aa17.22■□□□□ 0.35
PAXBP1-201ENST00000290178 GPR82Q96P67 336 aa17.22■□□□□ 0.35
PAXBP1-201ENST00000290178 KLF12Q9Y4X4 402 aa17.22■□□□□ 0.35
PAXBP1-201ENST00000290178 S4R3C0 116 aa17.22■□□□□ 0.35
PAXBP1-201ENST00000290178 HRNRQ86YZ3 2850 aaPredicted RBP17.22■□□□□ 0.35
PAXBP1-201ENST00000290178 TSKUQ8WUA8 353 aa17.22■□□□□ 0.35
PAXBP1-201ENST00000290178 ATG101Q9BSB4 218 aa17.22■□□□□ 0.35
PAXBP1-201ENST00000290178 KLF17Q5JT82 389 aaPredicted RBP17.21■□□□□ 0.35
PAXBP1-201ENST00000290178 EXOC3-AS1Q8N2X6 119 aa17.21■□□□□ 0.35
PAXBP1-201ENST00000290178 MLST8Q9BVC4 326 aa17.21■□□□□ 0.35
PAXBP1-201ENST00000290178 TCRAP04437 139 aa17.21■□□□□ 0.35
PAXBP1-201ENST00000290178 HIST1H1EP10412 219 aaKnown RBP17.21■□□□□ 0.35
PAXBP1-201ENST00000290178 ZNF705AQ6ZN79 300 aaPredicted RBP17.21■□□□□ 0.35
PAXBP1-201ENST00000290178 Q8N976 141 aa17.21■□□□□ 0.35
PAXBP1-201ENST00000290178 C18orf32Q8TCD1 76 aa17.21■□□□□ 0.35
PAXBP1-201ENST00000290178 SLC25A39Q9BZJ4 359 aaPredicted RBP17.21■□□□□ 0.35
PAXBP1-201ENST00000290178 ZNF586Q9NXT0 402 aa17.21■□□□□ 0.35
PAXBP1-201ENST00000290178 LIPFP07098 398 aa17.2■□□□□ 0.34
PAXBP1-201ENST00000290178 NTF3P20783 257 aa17.2■□□□□ 0.34
PAXBP1-201ENST00000290178 PLP1P60201 277 aa17.2■□□□□ 0.34
PAXBP1-201ENST00000290178 IGKV1-17P01599 117 aa17.2■□□□□ 0.34
PAXBP1-201ENST00000290178 C5orf17Q8NAS9 161 aa17.2■□□□□ 0.34
PAXBP1-201ENST00000290178 ASCL2Q99929 193 aa17.2■□□□□ 0.34
PAXBP1-201ENST00000290178 RASL11BQ9BPW5 248 aa17.2■□□□□ 0.34
PAXBP1-201ENST00000290178 ZNF324O75467 553 aaPredicted RBP17.19■□□□□ 0.34
PAXBP1-201ENST00000290178 WIPF2Q8TF74 440 aaPredicted RBP17.19■□□□□ 0.34
PAXBP1-201ENST00000290178 LY6G5BQ8NDX9 201 aa17.19■□□□□ 0.34
PAXBP1-201ENST00000290178 C17orf77Q96MU5 243 aa17.19■□□□□ 0.34
PAXBP1-201ENST00000290178 DIRC3C9JPN6 131 aa17.18■□□□□ 0.34
PAXBP1-201ENST00000290178 TOMM40O96008 361 aa17.18■□□□□ 0.34
PAXBP1-201ENST00000290178 NIT1Q86X76 327 aa17.18■□□□□ 0.34
PAXBP1-201ENST00000290178 KIR3DL3Q8N743 410 aa17.18■□□□□ 0.34
PAXBP1-201ENST00000290178 K7EIM0 57 aa17.18■□□□□ 0.34
PAXBP1-201ENST00000290178 LTAP01374 205 aa17.18■□□□□ 0.34
PAXBP1-201ENST00000290178 HTR1DP28221 377 aa17.18■□□□□ 0.34
PAXBP1-201ENST00000290178 ADORA2A-AS1P86434 159 aa17.18■□□□□ 0.34
PAXBP1-201ENST00000290178 LBHQ53QV2 105 aaPredicted RBP17.18■□□□□ 0.34
PAXBP1-201ENST00000290178 OR2D3Q8NGH3 330 aa17.18■□□□□ 0.34
PAXBP1-201ENST00000290178 VAMP8Q9BV40 100 aa17.18■□□□□ 0.34
PAXBP1-201ENST00000290178 RAXQ9Y2V3 346 aa17.18■□□□□ 0.34
PAXBP1-201ENST00000290178 ASH1LQ9NR48 2969 aaKnown RBP17.18■□□□□ 0.34
PAXBP1-201ENST00000290178 GTSF1Q8WW33 167 aa17.17■□□□□ 0.34
PAXBP1-201ENST00000290178 PAX2Q02962 417 aa17.17■□□□□ 0.34
PAXBP1-201ENST00000290178 FBXL19-AS1Q494R0 122 aa17.17■□□□□ 0.34
PAXBP1-201ENST00000290178 CIARTQ8N365 385 aaPredicted RBP17.17■□□□□ 0.34
PAXBP1-201ENST00000290178 FMC1Q96HJ9 113 aa17.16■□□□□ 0.34
PAXBP1-201ENST00000290178 RPP21Q9H633 154 aaKnown RBP17.16■□□□□ 0.34
PAXBP1-201ENST00000290178 HES1Q14469 280 aa17.16■□□□□ 0.34
PAXBP1-201ENST00000290178 PGLYRP4Q96LB8 373 aa17.16■□□□□ 0.34
PAXBP1-201ENST00000290178 DPM3Q9P2X0 92 aa17.16■□□□□ 0.34
PAXBP1-201ENST00000290178 C3orf79P0CE67 100 aa17.15■□□□□ 0.34
PAXBP1-201ENST00000290178 RASL11AQ6T310 242 aa17.15■□□□□ 0.34
PAXBP1-201ENST00000290178 GOLT1AQ6ZVE7 132 aa17.15■□□□□ 0.34
PAXBP1-201ENST00000290178 BCL6BQ8N143 479 aaPredicted RBP17.15■□□□□ 0.34
PAXBP1-201ENST00000290178 CFHR4Q92496 578 aa17.15■□□□□ 0.34
PAXBP1-201ENST00000290178 CHRDL1Q9BU40 450 aa17.15■□□□□ 0.34
PAXBP1-201ENST00000290178 PRSS22Q9GZN4 317 aa17.15■□□□□ 0.34
PAXBP1-201ENST00000290178 MRPL27Q9P0M9 148 aaKnown RBP17.15■□□□□ 0.34
PAXBP1-201ENST00000290178 NBR2O15453 112 aa17.15■□□□□ 0.34
PAXBP1-201ENST00000290178 P01737 135 aa17.15■□□□□ 0.34
PAXBP1-201ENST00000290178 PRNTQ86SH4 94 aa17.15■□□□□ 0.34
PAXBP1-201ENST00000290178 C20orf144Q9BQM9 153 aa17.15■□□□□ 0.34
PAXBP1-201ENST00000290178 ALKBH7Q9BT30 221 aaPredicted RBP17.15■□□□□ 0.34
PAXBP1-201ENST00000290178 RAB1BQ9H0U4 201 aa17.15■□□□□ 0.34
PAXBP1-201ENST00000290178 C19orf71A6NCJ1 209 aa17.14■□□□□ 0.33
PAXBP1-201ENST00000290178 M0R143 59 aa17.14■□□□□ 0.33
PAXBP1-201ENST00000290178 A0A1B0GXF2 115 aa17.14■□□□□ 0.33
PAXBP1-201ENST00000290178 RAB4AP20338 218 aa17.14■□□□□ 0.33
PAXBP1-201ENST00000290178 RNF5Q99942 180 aa17.14■□□□□ 0.33
PAXBP1-201ENST00000290178 RBM14Q96PK6 669 aaKnown RBP17.13■□□□□ 0.33
PAXBP1-201ENST00000290178 IGLV2-11P01706 119 aa17.13■□□□□ 0.33
PAXBP1-201ENST00000290178 OR11H6Q8NGC7 330 aa17.13■□□□□ 0.33
PAXBP1-201ENST00000290178 MIEN1Q9BRT3 115 aa17.13■□□□□ 0.33
PAXBP1-201ENST00000290178 OTORQ9NRC9 128 aa17.13■□□□□ 0.33
PAXBP1-201ENST00000290178 COL6A6A6NMZ7 2263 aa17.12■□□□□ 0.33
PAXBP1-201ENST00000290178 NUTF2P61970 127 aaKnown RBP17.12■□□□□ 0.33
PAXBP1-201ENST00000290178 Q86TA4 180 aa17.12■□□□□ 0.33
PAXBP1-201ENST00000290178 DAZAP1Q96EP5 407 aaKnown RBP17.12■□□□□ 0.33
PAXBP1-201ENST00000290178 FOXA3P55318 350 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms