RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 ATP6V0BQ99437 205 aa14.41□□□□□ -0.1
PCDHA13-201ENST00000289272 RAX2Q96IS3 184 aa14.41□□□□□ -0.1
PCDHA13-201ENST00000289272 OVOL2Q9BRP0 275 aa14.41□□□□□ -0.1
PCDHA13-201ENST00000289272 SPACA3Q8IXA5 215 aa14.41□□□□□ -0.1
PCDHA13-201ENST00000289272 DDB2Q92466 427 aa14.41□□□□□ -0.1
PCDHA13-201ENST00000289272 C11orf52Q96A22 123 aa14.41□□□□□ -0.1
PCDHA13-201ENST00000289272 RNF5Q99942 180 aa14.41□□□□□ -0.1
PCDHA13-201ENST00000289272 ZNF562Q6V9R5 426 aa14.41□□□□□ -0.1
PCDHA13-201ENST00000289272 TRAV21A0A0B4J279 112 aa14.4□□□□□ -0.1
PCDHA13-201ENST00000289272 PSMB11A5LHX3 300 aa14.4□□□□□ -0.1
PCDHA13-201ENST00000289272 DCTN5Q9BTE1 182 aa14.4□□□□□ -0.1
PCDHA13-201ENST00000289272 TNFRSF18Q9Y5U5 241 aa14.4□□□□□ -0.1
PCDHA13-201ENST00000289272 D6R8Y8 96 aa14.4□□□□□ -0.1
PCDHA13-201ENST00000289272 FOXF2Q12947 444 aa14.4□□□□□ -0.1
PCDHA13-201ENST00000289272 OR13C6PQ8NH95 151 aa14.4□□□□□ -0.1
PCDHA13-201ENST00000289272 ANAPC1Q9H1A4 1944 aa14.4□□□□□ -0.1
PCDHA13-201ENST00000289272 SPATA31B1PQ5VZV4 182 aa14.4□□□□□ -0.1
PCDHA13-201ENST00000289272 M0R381 172 aa14.39□□□□□ -0.11
PCDHA13-201ENST00000289272 CEACAM4O75871 244 aa14.39□□□□□ -0.11
PCDHA13-201ENST00000289272 RFNGQ9Y644 331 aa14.39□□□□□ -0.11
PCDHA13-201ENST00000289272 MED12Q93074 2177 aa14.39□□□□□ -0.11
PCDHA13-201ENST00000289272 SMIM27A0A1W2PRY6 76 aa14.39□□□□□ -0.11
PCDHA13-201ENST00000289272 FAM168AQ92567 244 aa14.39□□□□□ -0.11
PCDHA13-201ENST00000289272 PLXNA2O75051 1894 aa14.39□□□□□ -0.11
PCDHA13-201ENST00000289272 IGHV1-24A0A0C4DH33 117 aa14.39□□□□□ -0.11
PCDHA13-201ENST00000289272 LGALS9BQ3B8N2 356 aa14.39□□□□□ -0.11
PCDHA13-201ENST00000289272 CD300EQ496F6 205 aaPredicted RBP14.39□□□□□ -0.11
PCDHA13-201ENST00000289272 LGALS9CQ6DKI2 356 aa14.39□□□□□ -0.11
PCDHA13-201ENST00000289272 S100A7L2Q5SY68 101 aa14.38□□□□□ -0.11
PCDHA13-201ENST00000289272 NTF4P34130 210 aa14.38□□□□□ -0.11
PCDHA13-201ENST00000289272 ZNF329Q86UD4 541 aa14.38□□□□□ -0.11
PCDHA13-201ENST00000289272 TMEM167AQ8TBQ9 72 aa14.38□□□□□ -0.11
PCDHA13-201ENST00000289272 C5orf63A6NC05 138 aa14.38□□□□□ -0.11
PCDHA13-201ENST00000289272 SUMO2P61956 95 aaKnown RBP14.38□□□□□ -0.11
PCDHA13-201ENST00000289272 CGB1A6NKQ9 187 aa14.38□□□□□ -0.11
PCDHA13-201ENST00000289272 RNF144BQ7Z419 303 aa14.38□□□□□ -0.11
PCDHA13-201ENST00000289272 TMEM101Q96IK0 257 aa14.38□□□□□ -0.11
PCDHA13-201ENST00000289272 PPDPFLQ8WWR9 84 aa14.37□□□□□ -0.11
PCDHA13-201ENST00000289272 MLNRO43193 412 aa14.37□□□□□ -0.11
PCDHA13-201ENST00000289272 C1orf147Q96MC9 270 aaPredicted RBP14.37□□□□□ -0.11
PCDHA13-201ENST00000289272 PAX9P55771 341 aa14.37□□□□□ -0.11
PCDHA13-201ENST00000289272 FAM216BQ8N7L0 139 aa14.37□□□□□ -0.11
PCDHA13-201ENST00000289272 WIPF2Q8TF74 440 aaPredicted RBP14.37□□□□□ -0.11
PCDHA13-201ENST00000289272 IGHV3-48P01763 117 aa14.37□□□□□ -0.11
PCDHA13-201ENST00000289272 FAM201AQ5SY85 155 aa14.37□□□□□ -0.11
PCDHA13-201ENST00000289272 Q6P435 159 aa14.37□□□□□ -0.11
PCDHA13-201ENST00000289272 SRSF8Q9BRL6 282 aaKnown RBP14.36□□□□□ -0.11
PCDHA13-201ENST00000289272 FBXL15Q9H469 300 aa14.36□□□□□ -0.11
PCDHA13-201ENST00000289272 SELLP14151 372 aa14.36□□□□□ -0.11
PCDHA13-201ENST00000289272 CENPVQ7Z7K6 275 aaPredicted RBP14.36□□□□□ -0.11
PCDHA13-201ENST00000289272 GTSCR1Q86UQ5 136 aa14.36□□□□□ -0.11
PCDHA13-201ENST00000289272 V9GYV3 84 aa14.36□□□□□ -0.11
PCDHA13-201ENST00000289272 FOXG1P55316 489 aaPredicted RBP14.36□□□□□ -0.11
PCDHA13-201ENST00000289272 CNTFRP26992 372 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 RPL15P61313 204 aaKnown RBP14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 RPUSD1Q9UJJ7 312 aaKnown RBP14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 ETV2O00321 342 aaPredicted RBP14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 OVOL1O14753 267 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 PPP1R27Q86WC6 154 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 IGLC7A0M8Q6 106 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 ZNF726P1Q15940 193 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 PLSCR4Q9NRQ2 329 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 FRMPD3Q5JV73 1810 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 IGHV2-70DA0A0C4DH43 119 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 A0A0G2JRQ6 117 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 M0R2P5 195 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 NBR2O15453 112 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 KLF5Q13887 457 aaPredicted RBP14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 SPRR3Q9UBC9 169 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 SRRM5B3KS81 715 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 IGHV4-39P01824 125 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 DSCR9P59020 149 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 SRSF6Q13247 344 aaKnown RBP14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 PDE6HQ13956 83 aa14.35□□□□□ -0.11
PCDHA13-201ENST00000289272 CACNA1DQ01668 2161 aa14.34□□□□□ -0.11
PCDHA13-201ENST00000289272 BVES-AS1Q5T3Y7 98 aa14.34□□□□□ -0.11
PCDHA13-201ENST00000289272 FAM74A4Q5TZK3 123 aa14.34□□□□□ -0.11
PCDHA13-201ENST00000289272 KLF12Q9Y4X4 402 aa14.34□□□□□ -0.11
PCDHA13-201ENST00000289272 RRN3P1Q2M238 152 aa14.34□□□□□ -0.11
PCDHA13-201ENST00000289272 TMEM95Q3KNT9 176 aa14.34□□□□□ -0.11
PCDHA13-201ENST00000289272 MBNL3Q9NUK0 354 aaKnown RBP14.34□□□□□ -0.11
PCDHA13-201ENST00000289272 LYZL1Q6UWQ5 148 aa14.34□□□□□ -0.11
PCDHA13-201ENST00000289272 RTTNQ86VV8 2226 aa14.34□□□□□ -0.11
PCDHA13-201ENST00000289272 A0A1W2PPM0 123 aa14.34□□□□□ -0.11
PCDHA13-201ENST00000289272 Q86TA4 180 aa14.34□□□□□ -0.11
PCDHA13-201ENST00000289272 HAX1O00165 279 aa14.33□□□□□ -0.12
PCDHA13-201ENST00000289272 Q6ZRM9 215 aa14.33□□□□□ -0.12
PCDHA13-201ENST00000289272 C11orf68Q9H3H3 251 aaKnown RBP14.33□□□□□ -0.12
PCDHA13-201ENST00000289272 IGLL1P15814 213 aa14.33□□□□□ -0.12
PCDHA13-201ENST00000289272 TMEM75Q8N9X5 138 aa14.33□□□□□ -0.12
PCDHA13-201ENST00000289272 PGPEP1Q9NXJ5 209 aa14.33□□□□□ -0.12
PCDHA13-201ENST00000289272 WNT2P09544 360 aa14.32□□□□□ -0.12
PCDHA13-201ENST00000289272 Q0VFX4 171 aa14.32□□□□□ -0.12
PCDHA13-201ENST00000289272 SLC25A15Q9Y619 301 aa14.32□□□□□ -0.12
PCDHA13-201ENST00000289272 THADAQ6YHU6 1953 aa14.32□□□□□ -0.12
PCDHA13-201ENST00000289272 MORN3Q6PF18 240 aaPredicted RBP14.32□□□□□ -0.12
PCDHA13-201ENST00000289272 STPG4Q8N801 248 aa14.32□□□□□ -0.12
PCDHA13-201ENST00000289272 TMEM133Q9H2Q1 129 aa14.32□□□□□ -0.12
PCDHA13-201ENST00000289272 VDAC2P45880 294 aaPredicted RBP14.32□□□□□ -0.12
PCDHA13-201ENST00000289272 CD33P20138 364 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms