RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 A0A1B0GXF2 115 aa8.38□□□□□ -1.07
SKA1-201ENST00000285116 hADV38S2A0JD32 116 aa8.38□□□□□ -1.07
SKA1-201ENST00000285116 SRRM4A7MD48 611 aaKnown RBP8.38□□□□□ -1.07
SKA1-201ENST00000285116 LEPROTL1O95214 131 aa8.38□□□□□ -1.07
SKA1-201ENST00000285116 FSTL3O95633 263 aa8.38□□□□□ -1.07
SKA1-201ENST00000285116 SAA1P0DJI8 122 aaPredicted RBP8.38□□□□□ -1.07
SKA1-201ENST00000285116 HIST1H1EP10412 219 aaKnown RBP8.38□□□□□ -1.07
SKA1-201ENST00000285116 MYCNOSP40205 109 aa8.38□□□□□ -1.07
SKA1-201ENST00000285116 CAMPP49913 170 aa8.38□□□□□ -1.07
SKA1-201ENST00000285116 PAX2Q02962 417 aa8.38□□□□□ -1.07
SKA1-201ENST00000285116 NUP37Q8NFH4 326 aa8.38□□□□□ -1.07
SKA1-201ENST00000285116 TMEM167AQ8TBQ9 72 aa8.38□□□□□ -1.07
SKA1-201ENST00000285116 HIGD1CA8MV81 97 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 CORTO00230 105 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 IGHV1-46P01743 117 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 GATA2P23769 480 aaPredicted RBP8.37□□□□□ -1.07
SKA1-201ENST00000285116 C16orf54Q6UWD8 224 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 PIP4P1Q86T03 277 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 INTS1Q8N201 2190 aaKnown RBP8.37□□□□□ -1.07
SKA1-201ENST00000285116 LINC00311Q8N616 119 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 LEAP2Q969E1 77 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 MEGF9Q9H1U4 602 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 RAXQ9Y2V3 346 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 CCDC168Q8NDH2 2452 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 IGHV1-24A0A0C4DH33 117 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 SMAD7O15105 426 aaKnown RBP8.37□□□□□ -1.07
SKA1-201ENST00000285116 CIDEAO60543 219 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 OR5AL1P0C617 328 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 IGLC1P0CG04 106 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 VHLLQ6RSH7 139 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 VSTM2AQ8TAG5 236 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 C7orf69Q9H7B7 122 aa8.37□□□□□ -1.07
SKA1-201ENST00000285116 AMMECR1Q9Y4X0 333 aaPredicted RBP8.37□□□□□ -1.07
SKA1-201ENST00000285116 FLNBO75369 2602 aaKnown RBP8.37□□□□□ -1.07
SKA1-201ENST00000285116 TRAV8-6A0A0B4J262 113 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 APOA2P02652 100 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 IGKV1-16P04430 117 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 FAM87AP0C7U9 286 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 MYOD1P15172 320 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 ZNF137PP52743 207 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 UBE2L3P68036 154 aaKnown RBP8.36□□□□□ -1.07
SKA1-201ENST00000285116 ERHP84090 104 aaKnown RBP8.36□□□□□ -1.07
SKA1-201ENST00000285116 ZNF474Q6S9Z5 364 aaPredicted RBP8.36□□□□□ -1.07
SKA1-201ENST00000285116 IGFL3Q6UXB1 125 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 ZNF329Q86UD4 541 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 OR9G1Q8NH87 305 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 KLF12Q9Y4X4 402 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 SH2D7A6NKC9 451 aaPredicted RBP8.36□□□□□ -1.07
SKA1-201ENST00000285116 M0R1B8 84 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 SPRY3O43610 288 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 S100A7P31151 101 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 NBL1P41271 181 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 ARF6P62330 175 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 HBBP68871 147 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 TNFAIP6P98066 277 aaPredicted RBP8.36□□□□□ -1.07
SKA1-201ENST00000285116 PDPNQ86YL7 162 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 STXBP6Q8NFX7 210 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 LINC00479Q96M42 142 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 MAP1LC3CQ9BXW4 147 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 ZNF430Q9H8G1 570 aaPredicted RBP8.36□□□□□ -1.07
SKA1-201ENST00000285116 DYSFO75923 2080 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 TCRBV4S1A1TA0A5B7 111 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 IGHV3-7P01780 117 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 LIPFP07098 398 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 TMEM11P17152 192 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 GPR183P32249 361 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 CT83Q5H943 113 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 SSX8Q7RTT4 187 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 PMCHL2Q9BQD1 86 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 ZNF835Q9Y2P0 537 aa8.36□□□□□ -1.07
SKA1-201ENST00000285116 SOX21Q9Y651 276 aaPredicted RBP8.36□□□□□ -1.07
SKA1-201ENST00000285116 GAGE10A6NGK3 116 aa8.35□□□□□ -1.07
SKA1-201ENST00000285116 PEX7O00628 323 aa8.35□□□□□ -1.07
SKA1-201ENST00000285116 SUB1P53999 127 aaKnown RBP eCLIP8.35□□□□□ -1.07
SKA1-201ENST00000285116 ASPHD1Q5U4P2 390 aa8.35□□□□□ -1.07
SKA1-201ENST00000285116 LINC00173Q6ZV60 143 aa8.35□□□□□ -1.07
SKA1-201ENST00000285116 MOB3BQ86TA1 216 aa8.35□□□□□ -1.07
SKA1-201ENST00000285116 HINT2Q9BX68 163 aa8.35□□□□□ -1.07
SKA1-201ENST00000285116 TLN2Q9Y4G6 2542 aa8.35□□□□□ -1.07
SKA1-201ENST00000285116 HEATR1Q9H583 2144 aaKnown RBP8.35□□□□□ -1.07
SKA1-201ENST00000285116 NBEAP1P0C6P0 100 aa8.35□□□□□ -1.07
SKA1-201ENST00000285116 SEC11AP67812 179 aa8.35□□□□□ -1.07
SKA1-201ENST00000285116 TM4SF20Q53R12 229 aa8.35□□□□□ -1.07
SKA1-201ENST00000285116 DUX4L9Q6RFH8 374 aaPredicted RBP8.35□□□□□ -1.07
SKA1-201ENST00000285116 FXYD5Q96DB9 178 aa8.35□□□□□ -1.07
SKA1-201ENST00000285116 IGKV1D-37A0A075B6S9 117 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 A0A087X0K7 114 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 LOC102724200A0A096LPH7 203 aaPredicted RBP8.34□□□□□ -1.07
SKA1-201ENST00000285116 C7orf71A4D174 169 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 VWC2LB2RUY7 222 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 CRYGCP07315 174 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 C10orf113Q5VZT2 155 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 GTF2H5Q6ZYL4 71 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 PAXXQ9BUH6 204 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 HECTD1Q9ULT8 2610 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 PRR30Q53SZ7 412 aaPredicted RBP8.34□□□□□ -1.07
SKA1-201ENST00000285116 C1orf185Q5T7R7 199 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 TCF24Q7RTU0 167 aa8.34□□□□□ -1.07
SKA1-201ENST00000285116 ZCCHC24Q8N2G6 241 aaKnown RBP8.34□□□□□ -1.07
SKA1-201ENST00000285116 FER1L6-AS1Q8NA97 138 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms