RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 RBM14Q96PK6 669 aaKnown RBP12.08□□□□□ -0.48
SF3B4-201ENST00000271628 MEGF9Q9H1U4 602 aa12.08□□□□□ -0.48
SF3B4-201ENST00000271628 IGLV11-55A0A075B6I3 123 aa12.07□□□□□ -0.48
SF3B4-201ENST00000271628 TRAV30A0A087WSZ9 112 aa12.07□□□□□ -0.48
SF3B4-201ENST00000271628 TRAV40A0A0B4J280 105 aa12.07□□□□□ -0.48
SF3B4-201ENST00000271628 HELTA6NFD8 242 aa12.07□□□□□ -0.48
SF3B4-201ENST00000271628 RPL19P84098 196 aaKnown RBP12.07□□□□□ -0.48
SF3B4-201ENST00000271628 NDPQ00604 133 aa12.07□□□□□ -0.48
SF3B4-201ENST00000271628 C7orf69Q9H7B7 122 aa12.07□□□□□ -0.48
SF3B4-201ENST00000271628 OR10J4P0C629 311 aa12.07□□□□□ -0.48
SF3B4-201ENST00000271628 ADMP35318 185 aa12.07□□□□□ -0.48
SF3B4-201ENST00000271628 PAXXQ9BUH6 204 aa12.07□□□□□ -0.48
SF3B4-201ENST00000271628 TRAV5A0A0B4J249 113 aa12.06□□□□□ -0.48
SF3B4-201ENST00000271628 PSG1P11464 419 aa12.06□□□□□ -0.48
SF3B4-201ENST00000271628 HNF1AP20823 631 aa12.06□□□□□ -0.48
SF3B4-201ENST00000271628 GNG4P50150 75 aa12.06□□□□□ -0.48
SF3B4-201ENST00000271628 UBE2L3P68036 154 aaKnown RBP12.06□□□□□ -0.48
SF3B4-201ENST00000271628 MORN5Q5VZ52 161 aa12.06□□□□□ -0.48
SF3B4-201ENST00000271628 TMEM68Q96MH6 324 aa12.06□□□□□ -0.48
SF3B4-201ENST00000271628 ZNF48Q96MX3 618 aaPredicted RBP12.06□□□□□ -0.48
SF3B4-201ENST00000271628 FANCD2OSQ96PS1 177 aa12.06□□□□□ -0.48
SF3B4-201ENST00000271628 CELSR2Q9HCU4 2923 aa12.06□□□□□ -0.48
SF3B4-201ENST00000271628 TRBV9A0A0B4J1U6 114 aa12.06□□□□□ -0.48
SF3B4-201ENST00000271628 MFAP4P55083 255 aa12.06□□□□□ -0.48
SF3B4-201ENST00000271628 ERVFC1-1P60608 527 aa12.06□□□□□ -0.48
SF3B4-201ENST00000271628 RPEL1Q2QD12 228 aa12.06□□□□□ -0.48
SF3B4-201ENST00000271628 NDUFAF3Q9BU61 184 aa12.06□□□□□ -0.48
SF3B4-201ENST00000271628 ABCA2Q9BZC7 2435 aa12.05□□□□□ -0.48
SF3B4-201ENST00000271628 EGR2P11161 476 aaPredicted RBP12.05□□□□□ -0.48
SF3B4-201ENST00000271628 PAFAH1B2P68402 229 aa12.05□□□□□ -0.48
SF3B4-201ENST00000271628 KLF17Q5JT82 389 aaPredicted RBP12.05□□□□□ -0.48
SF3B4-201ENST00000271628 ZNF600Q6ZNG1 722 aa12.05□□□□□ -0.48
SF3B4-201ENST00000271628 TMEM256Q8N2U0 113 aa12.05□□□□□ -0.48
SF3B4-201ENST00000271628 GSX1Q9H4S2 264 aaPredicted RBP12.05□□□□□ -0.48
SF3B4-201ENST00000271628 HIF1ANQ9NWT6 349 aa12.05□□□□□ -0.48
SF3B4-201ENST00000271628 SPG11Q96JI7 2443 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 SLC17A3O00476 420 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 GNG7O60262 68 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 SCGB2A1O75556 95 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 IGKV1-17P01599 117 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 ESDP10768 282 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 TIGITQ495A1 244 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 BRD3OSQ6XYD6 125 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 HIGD1AQ9Y241 93 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 V9GYV3 84 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 IGHV3OR16-10A0A075B7F0 116 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 CRYBB3P26998 211 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 RAB4BP61018 213 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 SUMO1P63165 101 aaKnown RBP12.04□□□□□ -0.48
SF3B4-201ENST00000271628 CENPWQ5EE01 88 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 S100A7AQ86SG5 101 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 MS4A10Q96PG2 267 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 HSPB9Q9BQS6 159 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 TMUB1Q9BVT8 246 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 GNB1LQ9BYB4 327 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 MRPL18Q9H0U6 180 aaKnown RBP12.04□□□□□ -0.48
SF3B4-201ENST00000271628 OSTCQ9NRP0 149 aa12.04□□□□□ -0.48
SF3B4-201ENST00000271628 LRRK2Q5S007 2527 aa12.03□□□□□ -0.48
SF3B4-201ENST00000271628 TOMM40O96008 361 aa12.03□□□□□ -0.48
SF3B4-201ENST00000271628 CRISP2P16562 243 aa12.03□□□□□ -0.48
SF3B4-201ENST00000271628 CBLN1P23435 193 aa12.03□□□□□ -0.48
SF3B4-201ENST00000271628 COX19Q49B96 90 aa12.03□□□□□ -0.48
SF3B4-201ENST00000271628 C5orf56Q8N8D9 126 aa12.03□□□□□ -0.48
SF3B4-201ENST00000271628 LINC01356Q8N9X3 169 aa12.03□□□□□ -0.48
SF3B4-201ENST00000271628 FAM110DQ8TAY7 271 aaPredicted RBP12.03□□□□□ -0.48
SF3B4-201ENST00000271628 CMTM2Q8TAZ6 248 aa12.03□□□□□ -0.48
SF3B4-201ENST00000271628 C2orf88Q9BSF0 95 aa12.03□□□□□ -0.48
SF3B4-201ENST00000271628 BEX4Q9NWD9 120 aaPredicted RBP12.03□□□□□ -0.48
SF3B4-201ENST00000271628 C21orf62Q9NYP8 219 aa12.03□□□□□ -0.48
SF3B4-201ENST00000271628 MOB4Q9Y3A3 225 aa12.03□□□□□ -0.48
SF3B4-201ENST00000271628 FAM208BQ5VWN6 2430 aa12.03□□□□□ -0.48
SF3B4-201ENST00000271628 SCGB1D1O95968 90 aa12.02□□□□□ -0.48
SF3B4-201ENST00000271628 IGHV4-38-2P0DP08 117 aa12.02□□□□□ -0.48
SF3B4-201ENST00000271628 PYYP10082 97 aa12.02□□□□□ -0.48
SF3B4-201ENST00000271628 LYZP61626 148 aa12.02□□□□□ -0.48
SF3B4-201ENST00000271628 RANP62826 216 aaKnown RBP12.02□□□□□ -0.48
SF3B4-201ENST00000271628 KLK9Q2XQG4 91 aa12.02□□□□□ -0.48
SF3B4-201ENST00000271628 UNQ5815/PRO19632Q6UWF5 114 aa12.02□□□□□ -0.48
SF3B4-201ENST00000271628 FXYD5Q96DB9 178 aa12.02□□□□□ -0.48
SF3B4-201ENST00000271628 TXN2Q99757 166 aa12.02□□□□□ -0.48
SF3B4-201ENST00000271628 MRPL27Q9P0M9 148 aaKnown RBP12.02□□□□□ -0.48
SF3B4-201ENST00000271628 KLK9Q9UKQ9 250 aa12.02□□□□□ -0.48
SF3B4-201ENST00000271628 GGTLC3B5MD39 225 aa12.02□□□□□ -0.49
SF3B4-201ENST00000271628 ISLRO14498 428 aa12.02□□□□□ -0.49
SF3B4-201ENST00000271628 MT-ND6P03923 174 aa12.02□□□□□ -0.49
SF3B4-201ENST00000271628 TPPP2P59282 170 aa12.02□□□□□ -0.49
SF3B4-201ENST00000271628 SSTP61278 116 aa12.02□□□□□ -0.49
SF3B4-201ENST00000271628 Q0VG73 95 aa12.02□□□□□ -0.49
SF3B4-201ENST00000271628 LRRC75A-AS1Q8N1F1 130 aa12.02□□□□□ -0.49
SF3B4-201ENST00000271628 PIFOQ8TCI5 191 aa12.02□□□□□ -0.49
SF3B4-201ENST00000271628 ATP6V0E1O15342 81 aa12.01□□□□□ -0.49
SF3B4-201ENST00000271628 NUPR1O60356 82 aa12.01□□□□□ -0.49
SF3B4-201ENST00000271628 FCGR2BP31994 310 aaPredicted RBP12.01□□□□□ -0.49
SF3B4-201ENST00000271628 OR5I1Q13606 314 aa12.01□□□□□ -0.49
SF3B4-201ENST00000271628 WDR73Q6P4I2 378 aa12.01□□□□□ -0.49
SF3B4-201ENST00000271628 VN1R17PQ8TDU5 208 aa12.01□□□□□ -0.49
SF3B4-201ENST00000271628 SLC25A39Q9BZJ4 359 aaPredicted RBP12.01□□□□□ -0.49
SF3B4-201ENST00000271628 NAGKQ9UJ70 344 aa12.01□□□□□ -0.49
SF3B4-201ENST00000271628 CSMD1Q96PZ7 3565 aa12.01□□□□□ -0.49
SF3B4-201ENST00000271628 GRIFINA4D1Z8 144 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms