RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 MYO9AB2RTY4 2548 aa12.71□□□□□ -0.37
TPM1-201ENST00000267996 H3BRN7 92 aa12.7□□□□□ -0.38
TPM1-201ENST00000267996 IL4P05112 153 aa12.7□□□□□ -0.38
TPM1-201ENST00000267996 CLEC3BP05452 202 aa12.7□□□□□ -0.38
TPM1-201ENST00000267996 PYYP10082 97 aa12.7□□□□□ -0.38
TPM1-201ENST00000267996 GPR183P32249 361 aa12.7□□□□□ -0.38
TPM1-201ENST00000267996 UBE2L3P68036 154 aaKnown RBP12.7□□□□□ -0.38
TPM1-201ENST00000267996 FAM74A3Q4VXF1 159 aa12.7□□□□□ -0.38
TPM1-201ENST00000267996 ZNF343Q6P1L6 599 aa12.7□□□□□ -0.38
TPM1-201ENST00000267996 USMG5Q96IX5 58 aa12.7□□□□□ -0.38
TPM1-201ENST00000267996 NIPSNAP3BQ9BS92 247 aa12.7□□□□□ -0.38
TPM1-201ENST00000267996 PUS1Q9Y606 427 aaKnown RBP eCLIP12.7□□□□□ -0.38
TPM1-201ENST00000267996 SONP18583 2426 aaKnown RBP12.7□□□□□ -0.38
TPM1-201ENST00000267996 GP9P14770 177 aa12.7□□□□□ -0.38
TPM1-201ENST00000267996 KIAA0141Q14154 515 aaPredicted RBP12.7□□□□□ -0.38
TPM1-201ENST00000267996 USF2Q15853 346 aaPredicted RBP12.7□□□□□ -0.38
TPM1-201ENST00000267996 ZNF600Q6ZNG1 722 aa12.7□□□□□ -0.38
TPM1-201ENST00000267996 C11orf52Q96A22 123 aa12.7□□□□□ -0.38
TPM1-201ENST00000267996 PRSS22Q9GZN4 317 aa12.7□□□□□ -0.38
TPM1-201ENST00000267996 TMEM14CQ9P0S9 112 aa12.7□□□□□ -0.38
TPM1-201ENST00000267996 SRP14P37108 136 aaKnown RBP12.69□□□□□ -0.38
TPM1-201ENST00000267996 BTN1A1Q13410 526 aa12.69□□□□□ -0.38
TPM1-201ENST00000267996 AWAT1Q58HT5 328 aa12.69□□□□□ -0.38
TPM1-201ENST00000267996 CLEC19AQ6UXS0 136 aa12.69□□□□□ -0.38
TPM1-201ENST00000267996 TVP23CQ96ET8 276 aa12.69□□□□□ -0.38
TPM1-201ENST00000267996 NPFFR1Q9GZQ6 430 aa12.69□□□□□ -0.38
TPM1-201ENST00000267996 PARLQ9H300 379 aa12.69□□□□□ -0.38
TPM1-201ENST00000267996 ZNF702PQ9H963 129 aa12.69□□□□□ -0.38
TPM1-201ENST00000267996 YAE1D1Q9NRH1 226 aa12.69□□□□□ -0.38
TPM1-201ENST00000267996 TMEM89A2RUT3 159 aa12.68□□□□□ -0.38
TPM1-201ENST00000267996 ZNF727A8MUV8 499 aa12.68□□□□□ -0.38
TPM1-201ENST00000267996 DNASE2O00115 360 aaPredicted RBP12.68□□□□□ -0.38
TPM1-201ENST00000267996 TGOLN2O43493 480 aa12.68□□□□□ -0.38
TPM1-201ENST00000267996 TPPP2P59282 170 aa12.68□□□□□ -0.38
TPM1-201ENST00000267996 S100A7AQ86SG5 101 aa12.68□□□□□ -0.38
TPM1-201ENST00000267996 RPUSD4Q96CM3 377 aaKnown RBP12.68□□□□□ -0.38
TPM1-201ENST00000267996 KLK15Q9H2R5 256 aa12.68□□□□□ -0.38
TPM1-201ENST00000267996 NOTCH2Q04721 2471 aa12.68□□□□□ -0.38
TPM1-201ENST00000267996 C7orf77A4D0Y5 90 aa12.67□□□□□ -0.38
TPM1-201ENST00000267996 GGTLC3B5MD39 225 aa12.67□□□□□ -0.38
TPM1-201ENST00000267996 M0R036 132 aa12.67□□□□□ -0.38
TPM1-201ENST00000267996 IGHG4P01861 327 aa12.67□□□□□ -0.38
TPM1-201ENST00000267996 RHEBQ15382 184 aa12.67□□□□□ -0.38
TPM1-201ENST00000267996 TMEM95Q3KNT9 176 aa12.67□□□□□ -0.38
TPM1-201ENST00000267996 LEMD1Q68G75 181 aa12.67□□□□□ -0.38
TPM1-201ENST00000267996 Q8N2B8 174 aa12.67□□□□□ -0.38
TPM1-201ENST00000267996 SMIM7Q9BQ49 75 aa12.67□□□□□ -0.38
TPM1-201ENST00000267996 ZFAND3Q9H8U3 227 aa12.67□□□□□ -0.38
TPM1-201ENST00000267996 SDF2L1Q9HCN8 221 aa12.67□□□□□ -0.38
TPM1-201ENST00000267996 SCO2A0A1W2PP80 73 aa12.67□□□□□ -0.38
TPM1-201ENST00000267996 PF4V1P10720 104 aa12.67□□□□□ -0.38
TPM1-201ENST00000267996 PNRC1Q12796 327 aaPredicted RBP12.67□□□□□ -0.38
TPM1-201ENST00000267996 TOMM20LQ6UXN7 152 aa12.67□□□□□ -0.38
TPM1-201ENST00000267996 TMEM160Q9NX00 188 aa12.67□□□□□ -0.38
TPM1-201ENST00000267996 ZNF98A6NK75 572 aa12.66□□□□□ -0.38
TPM1-201ENST00000267996 NDUFB4O95168 129 aa12.66□□□□□ -0.38
TPM1-201ENST00000267996 NBEAP1P0C6P0 100 aa12.66□□□□□ -0.38
TPM1-201ENST00000267996 MYCNOSP40205 109 aa12.66□□□□□ -0.38
TPM1-201ENST00000267996 RAB9AP51151 201 aa12.66□□□□□ -0.38
TPM1-201ENST00000267996 TMEM241Q24JQ0 296 aa12.66□□□□□ -0.38
TPM1-201ENST00000267996 C20orf24Q9BUV8 137 aa12.66□□□□□ -0.38
TPM1-201ENST00000267996 NAT8Q9UHE5 227 aa12.66□□□□□ -0.38
TPM1-201ENST00000267996 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.65□□□□□ -0.38
TPM1-201ENST00000267996 A0A0G2JLM5 398 aa12.65□□□□□ -0.38
TPM1-201ENST00000267996 MRPS12O15235 138 aaKnown RBP12.65□□□□□ -0.38
TPM1-201ENST00000267996 HIST1H1EP10412 219 aaKnown RBP12.65□□□□□ -0.38
TPM1-201ENST00000267996 PSMB8P28062 276 aa12.65□□□□□ -0.38
TPM1-201ENST00000267996 ZNF674Q2M3X9 581 aa12.65□□□□□ -0.38
TPM1-201ENST00000267996 BMPR1BO00238 502 aa12.64□□□□□ -0.39
TPM1-201ENST00000267996 HNF1AP20823 631 aa12.64□□□□□ -0.39
TPM1-201ENST00000267996 SUMO1P63165 101 aaKnown RBP12.64□□□□□ -0.39
TPM1-201ENST00000267996 RELQ04864 619 aaPredicted RBP12.64□□□□□ -0.39
TPM1-201ENST00000267996 BPIFA4PQ86YQ2 179 aa12.64□□□□□ -0.39
TPM1-201ENST00000267996 ELOVL1Q9BW60 279 aa12.64□□□□□ -0.39
TPM1-201ENST00000267996 RPS10P5Q9NQ39 176 aa12.64□□□□□ -0.39
TPM1-201ENST00000267996 RABAC1Q9UI14 185 aa12.64□□□□□ -0.39
TPM1-201ENST00000267996 RNF24Q9Y225 148 aa12.64□□□□□ -0.39
TPM1-201ENST00000267996 B4DEV8 164 aa12.64□□□□□ -0.39
TPM1-201ENST00000267996 IGLC2P0DOY2 106 aa12.64□□□□□ -0.39
TPM1-201ENST00000267996 ZNF329Q86UD4 541 aa12.64□□□□□ -0.39
TPM1-201ENST00000267996 DERL1Q9BUN8 251 aa12.64□□□□□ -0.39
TPM1-201ENST00000267996 ZNF586Q9NXT0 402 aa12.64□□□□□ -0.39
TPM1-201ENST00000267996 A0A087WWC5 75 aa12.63□□□□□ -0.39
TPM1-201ENST00000267996 IGHV3-35A0A0C4DH35 117 aa12.63□□□□□ -0.39
TPM1-201ENST00000267996 CLPSL1A2RUU4 121 aa12.63□□□□□ -0.39
TPM1-201ENST00000267996 PPP5D1E7EU14 171 aa12.63□□□□□ -0.39
TPM1-201ENST00000267996 S100A7P31151 101 aa12.63□□□□□ -0.39
TPM1-201ENST00000267996 TMEM88Q6PEY1 159 aa12.63□□□□□ -0.39
TPM1-201ENST00000267996 CBLN2Q8IUK8 224 aa12.63□□□□□ -0.39
TPM1-201ENST00000267996 C2CD4CQ8TF44 421 aa12.63□□□□□ -0.39
TPM1-201ENST00000267996 DUX5Q96PT3 197 aa12.63□□□□□ -0.39
TPM1-201ENST00000267996 TCEAL7Q9BRU2 100 aa12.63□□□□□ -0.39
TPM1-201ENST00000267996 GNB4Q9HAV0 340 aa12.63□□□□□ -0.39
TPM1-201ENST00000267996 CRYBB3P26998 211 aa12.62□□□□□ -0.39
TPM1-201ENST00000267996 AKR1C3P42330 323 aa12.62□□□□□ -0.39
TPM1-201ENST00000267996 RPL23P62829 140 aaKnown RBP12.62□□□□□ -0.39
TPM1-201ENST00000267996 LCNL1Q6ZST4 164 aa12.62□□□□□ -0.39
TPM1-201ENST00000267996 BLNKQ8WV28 456 aa12.62□□□□□ -0.39
TPM1-201ENST00000267996 SMCO4Q9NRQ5 59 aa12.62□□□□□ -0.39
TPM1-201ENST00000267996 TRBV20OR9-2A0A075B6H5 130 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms