RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 NDUFB3O43676 98 aa13.45□□□□□ -0.26
SQLE-201ENST00000265896 PRR30Q53SZ7 412 aaPredicted RBP13.45□□□□□ -0.26
SQLE-201ENST00000265896 BCL6BQ8N143 479 aaPredicted RBP13.45□□□□□ -0.26
SQLE-201ENST00000265896 HRNRQ86YZ3 2850 aaPredicted RBP13.45□□□□□ -0.26
SQLE-201ENST00000265896 A0A0G2JNJ9 132 aa13.44□□□□□ -0.26
SQLE-201ENST00000265896 CCL25O15444 150 aa13.44□□□□□ -0.26
SQLE-201ENST00000265896 PTTG1IPP53801 180 aa13.44□□□□□ -0.26
SQLE-201ENST00000265896 GRAMD2BQ96HH9 432 aa13.44□□□□□ -0.26
SQLE-201ENST00000265896 Q9UFV3 132 aa13.44□□□□□ -0.26
SQLE-201ENST00000265896 RNF24Q9Y225 148 aa13.44□□□□□ -0.26
SQLE-201ENST00000265896 CHD8Q9HCK8 2581 aa13.44□□□□□ -0.26
SQLE-201ENST00000265896 FSTL3O95633 263 aa13.44□□□□□ -0.26
SQLE-201ENST00000265896 FOXE3Q13461 319 aa13.44□□□□□ -0.26
SQLE-201ENST00000265896 TMEM108Q6UXF1 575 aa13.44□□□□□ -0.26
SQLE-201ENST00000265896 Q9H3A6 140 aa13.44□□□□□ -0.26
SQLE-201ENST00000265896 DYNLRB1Q9NP97 96 aa13.44□□□□□ -0.26
SQLE-201ENST00000265896 P01737 135 aa13.44□□□□□ -0.26
SQLE-201ENST00000265896 PLGLAQ15195 96 aa13.44□□□□□ -0.26
SQLE-201ENST00000265896 RAB9BQ9NP90 201 aa13.44□□□□□ -0.26
SQLE-201ENST00000265896 IGHV3-35A0A0C4DH35 117 aa13.43□□□□□ -0.26
SQLE-201ENST00000265896 MRPL32Q9BYC8 188 aaKnown RBP13.43□□□□□ -0.26
SQLE-201ENST00000265896 CHODLQ9H9P2 273 aa13.43□□□□□ -0.26
SQLE-201ENST00000265896 WASHC3Q9Y3C0 194 aa13.43□□□□□ -0.26
SQLE-201ENST00000265896 NCOR2Q9Y618 2525 aa13.43□□□□□ -0.26
SQLE-201ENST00000265896 ITGB1BP1O14713 200 aa13.43□□□□□ -0.26
SQLE-201ENST00000265896 HIST1H1EP10412 219 aaKnown RBP13.43□□□□□ -0.26
SQLE-201ENST00000265896 TNFRSF1AP19438 455 aa13.43□□□□□ -0.26
SQLE-201ENST00000265896 OR1L4Q8NGR5 311 aa13.43□□□□□ -0.26
SQLE-201ENST00000265896 CACNG8Q8WXS5 425 aa13.43□□□□□ -0.26
SQLE-201ENST00000265896 DAZAP1Q96EP5 407 aaKnown RBP13.43□□□□□ -0.26
SQLE-201ENST00000265896 LOC102724200A0A096LPH7 203 aaPredicted RBP13.42□□□□□ -0.26
SQLE-201ENST00000265896 BTF3P20290 206 aaKnown RBP13.42□□□□□ -0.26
SQLE-201ENST00000265896 TMEM167AQ8TBQ9 72 aa13.42□□□□□ -0.26
SQLE-201ENST00000265896 ZFP30Q9Y2G7 519 aa13.42□□□□□ -0.26
SQLE-201ENST00000265896 IGLC7A0M8Q6 106 aa13.42□□□□□ -0.26
SQLE-201ENST00000265896 OR4C46A6NHA9 309 aa13.42□□□□□ -0.26
SQLE-201ENST00000265896 C2orf70A6NJV1 201 aa13.42□□□□□ -0.26
SQLE-201ENST00000265896 M0R3E3 92 aa13.42□□□□□ -0.26
SQLE-201ENST00000265896 PSG1P11464 419 aa13.42□□□□□ -0.26
SQLE-201ENST00000265896 COL8A1P27658 744 aa13.42□□□□□ -0.26
SQLE-201ENST00000265896 LOXP28300 417 aaPredicted RBP13.42□□□□□ -0.26
SQLE-201ENST00000265896 TMEM178BH3BS89 294 aa13.41□□□□□ -0.26
SQLE-201ENST00000265896 IGHV3-23P01764 117 aa13.41□□□□□ -0.26
SQLE-201ENST00000265896 MPV17L2Q567V2 206 aa13.41□□□□□ -0.26
SQLE-201ENST00000265896 LRRC10Q5BKY1 277 aa13.41□□□□□ -0.26
SQLE-201ENST00000265896 PNKDQ8N490 385 aa13.41□□□□□ -0.26
SQLE-201ENST00000265896 PTPRQQ9UMZ3 2332 aa13.41□□□□□ -0.26
SQLE-201ENST00000265896 LOC389332A0A1B0GUA5 103 aa13.41□□□□□ -0.26
SQLE-201ENST00000265896 C16orf97H3BN30 126 aa13.41□□□□□ -0.26
SQLE-201ENST00000265896 THBDP07204 575 aa13.41□□□□□ -0.26
SQLE-201ENST00000265896 SUB1P53999 127 aaKnown RBP eCLIP13.41□□□□□ -0.26
SQLE-201ENST00000265896 MRGPRG-AS1Q2M3A8 158 aa13.41□□□□□ -0.26
SQLE-201ENST00000265896 LOXL4Q96JB6 756 aa13.41□□□□□ -0.26
SQLE-201ENST00000265896 GPR82Q96P67 336 aa13.41□□□□□ -0.26
SQLE-201ENST00000265896 C20orf202A1L168 122 aa13.41□□□□□ -0.26
SQLE-201ENST00000265896 VMA21Q3ZAQ7 101 aa13.41□□□□□ -0.26
SQLE-201ENST00000265896 IGFL4Q6B9Z1 124 aa13.41□□□□□ -0.26
SQLE-201ENST00000265896 RNASE8Q8TDE3 154 aaKnown RBP13.41□□□□□ -0.26
SQLE-201ENST00000265896 RPP21Q9H633 154 aaKnown RBP13.41□□□□□ -0.26
SQLE-201ENST00000265896 IGHV1-24A0A0C4DH33 117 aa13.4□□□□□ -0.26
SQLE-201ENST00000265896 CBY3A6NI87 242 aa13.4□□□□□ -0.26
SQLE-201ENST00000265896 CHEK1O14757 476 aa13.4□□□□□ -0.26
SQLE-201ENST00000265896 RPL27AP46776 148 aaKnown RBP13.4□□□□□ -0.26
SQLE-201ENST00000265896 HBBP68871 147 aa13.4□□□□□ -0.26
SQLE-201ENST00000265896 TEX36Q5VZQ5 186 aa13.4□□□□□ -0.26
SQLE-201ENST00000265896 TEX45Q8NA69 505 aa13.4□□□□□ -0.26
SQLE-201ENST00000265896 PERPQ96FX8 193 aa13.4□□□□□ -0.26
SQLE-201ENST00000265896 C7orf69Q9H7B7 122 aa13.4□□□□□ -0.26
SQLE-201ENST00000265896 HILPDAQ9Y5L2 63 aa13.4□□□□□ -0.26
SQLE-201ENST00000265896 FNDC10F2Z333 226 aa13.4□□□□□ -0.26
SQLE-201ENST00000265896 C19orf24Q9BVV8 132 aa13.4□□□□□ -0.26
SQLE-201ENST00000265896 RNF151Q2KHN1 245 aa13.39□□□□□ -0.27
SQLE-201ENST00000265896 SRSF12Q8WXF0 261 aaKnown RBP13.39□□□□□ -0.27
SQLE-201ENST00000265896 TRAV9-2A0A087WT02 112 aa13.39□□□□□ -0.27
SQLE-201ENST00000265896 TCRAP04437 139 aa13.39□□□□□ -0.27
SQLE-201ENST00000265896 FAM106CPP0CH98 169 aa13.39□□□□□ -0.27
SQLE-201ENST00000265896 FAM106AQ4KMX7 169 aa13.39□□□□□ -0.27
SQLE-201ENST00000265896 WFDC3Q8IUB2 231 aa13.39□□□□□ -0.27
SQLE-201ENST00000265896 ZNF596Q8TC21 504 aa13.39□□□□□ -0.27
SQLE-201ENST00000265896 INSIG2Q9Y5U4 225 aa13.39□□□□□ -0.27
SQLE-201ENST00000265896 CNIH1O95406 144 aa13.38□□□□□ -0.27
SQLE-201ENST00000265896 IGHV1-8P0DP01 117 aa13.38□□□□□ -0.27
SQLE-201ENST00000265896 TMEM116Q8NCL8 245 aa13.38□□□□□ -0.27
SQLE-201ENST00000265896 OR8B3Q8NGG8 313 aa13.38□□□□□ -0.27
SQLE-201ENST00000265896 RBM14Q96PK6 669 aaKnown RBP13.38□□□□□ -0.27
SQLE-201ENST00000265896 LEPROTL1O95214 131 aa13.38□□□□□ -0.27
SQLE-201ENST00000265896 KLHDC1Q8N7A1 406 aa13.38□□□□□ -0.27
SQLE-201ENST00000265896 FAM169BQ8N8A8 192 aa13.38□□□□□ -0.27
SQLE-201ENST00000265896 TMEM70Q9BUB7 260 aa13.38□□□□□ -0.27
SQLE-201ENST00000265896 TMUB1Q9BVT8 246 aa13.38□□□□□ -0.27
SQLE-201ENST00000265896 SPG11Q96JI7 2443 aa13.38□□□□□ -0.27
SQLE-201ENST00000265896 ARMS2P0C7Q2 107 aa13.38□□□□□ -0.27
SQLE-201ENST00000265896 FBLN7Q53RD9 439 aa13.38□□□□□ -0.27
SQLE-201ENST00000265896 VSTM2AQ8TAG5 236 aa13.38□□□□□ -0.27
SQLE-201ENST00000265896 SERTM2A0A1B0GWG4 89 aa13.37□□□□□ -0.27
SQLE-201ENST00000265896 NUDT3O95989 172 aa13.37□□□□□ -0.27
SQLE-201ENST00000265896 PCP4P48539 62 aa13.37□□□□□ -0.27
SQLE-201ENST00000265896 VAMP3Q15836 100 aa13.37□□□□□ -0.27
SQLE-201ENST00000265896 PIP4P1Q86T03 277 aa13.37□□□□□ -0.27
SQLE-201ENST00000265896 ABHD17AQ96GS6 310 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms